Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609853
Identifier: 120609853
GI number: 120609853
Start: 1285317
End: 1285646
Strand: Direct
Name: 120609853
Synonym: Aave_1165
Alternate gene names: NA
Gene position: 1285317-1285646 (Clockwise)
Preceding gene: 120609849
Following gene: 120609856
Centisome position: 24.01
GC content: 66.06
Gene sequence:
>330_bases ATGGTTTCCCCCAACTCGAAAGAAGTCTTCATCCAAGGCATCACCCACGACGGGAAAACCTTCCGCCCCAGCGACTGGGC AGAGCGCCTCGCGGGGGTCATGGGCCAGTTCCGGCCCGGCGGCGCCAGGCCCGGCAGCCATCTGAGCTATTCCCCCTGGT GCGTGCCCACCACCATGAATGGCGTGAAGTGCGTGGTGGTCCACCGCGACCTCCAGACGCATGAGCCCATGGCCTGGGAC TTCGTCATGAATTTCGCGCGAGACAACGGCCTGCAGGTGGCCGAGGCCTGCCTGCTGCCGGACGGCGTTCCTGCCCCTGG GAAGGCCTGA
Upstream 100 bases:
>100_bases TCTTTGGGATGGGTAGCTCTTATATAAGAGTTAGAATGCTGGTCAGTAGCGCCTGGCGGCGATCCTGCGGCGATTCCACT CCACGACCCCCCGATCCCCC
Downstream 100 bases:
>100_bases GCCCCGCTGGGTCCTGCCTTTCCGCGAACCGGGCGCGCCGCTCCAGGCCATCGGGCTGCGCGTCCGCTCCCCCATCCCCG TTTCCCATGAGCCCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MVSPNSKEVFIQGITHDGKTFRPSDWAERLAGVMGQFRPGGARPGSHLSYSPWCVPTTMNGVKCVVVHRDLQTHEPMAWD FVMNFARDNGLQVAEACLLPDGVPAPGKA
Sequences:
>Translated_109_residues MVSPNSKEVFIQGITHDGKTFRPSDWAERLAGVMGQFRPGGARPGSHLSYSPWCVPTTMNGVKCVVVHRDLQTHEPMAWD FVMNFARDNGLQVAEACLLPDGVPAPGKA >Mature_109_residues MVSPNSKEVFIQGITHDGKTFRPSDWAERLAGVMGQFRPGGARPGSHLSYSPWCVPTTMNGVKCVVVHRDLQTHEPMAWD FVMNFARDNGLQVAEACLLPDGVPAPGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11878; Mature: 11878
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPNSKEVFIQGITHDGKTFRPSDWAERLAGVMGQFRPGGARPGSHLSYSPWCVPTTMN CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCC GVKCVVVHRDLQTHEPMAWDFVMNFARDNGLQVAEACLLPDGVPAPGKA CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVSPNSKEVFIQGITHDGKTFRPSDWAERLAGVMGQFRPGGARPGSHLSYSPWCVPTTMN CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCC GVKCVVVHRDLQTHEPMAWDFVMNFARDNGLQVAEACLLPDGVPAPGKA CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA