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The map label for this gene is ycgG [C]

Identifier: 120609811

GI number: 120609811

Start: 1226658

End: 1228571

Strand: Reverse

Name: ycgG [C]

Synonym: Aave_1120

Alternate gene names: 120609811

Gene position: 1228571-1226658 (Counterclockwise)

Preceding gene: 120609812

Following gene: 120609808

Centisome position: 22.95

GC content: 71.0

Gene sequence:

>1914_bases
ATGGCAGTAACAACCGCTCCCGTCAATGACAGCACGCTGCAGGCGGTGCTGGATTCTCTGTCGTCCGCGGTGCGCGACGG
CACGGGCCCGCTCGTACAGCTCATGCGTGAAGGCGGGCTCCACTGTGTCTTCCAGCCCCTGGCCGATCTGCGCGAGGGCA
ACGTCTATGCCCACGAGGCCCTGATCCGCGGCCCGGCGGGCACGCCGCTGCACACGCCCGACCGGCTGCTGCAGACCGCG
CTCGGGGAAGGCGTTCTGCAGGAGTTCGAGCTGCTGTGCGTGGCGATCGCCCTGCGCCAGTGGGGGGCGTCCGGCGGCGC
AGGCCGCCTGTTCGTGAACATCAGCGCGGATGCCCTGGTGCGCGGGGTGGCGCTGTGCCGCGGCATGACCCTGGCGGGCG
CCGCCCGCGCCGCGGGCGTGTCGGCGGAGAACGTGGTGCTGGAGATCACCGAGCACGAGCGCGTGGGCGACATGGCCTCG
CTGCGCGAGGCGCTCAAGCAGGTGCACGCCTGCGGCGCCCGCATCGCGCTCGACGATTTCGGGGACGGCCGCTCCAGCCT
GCGGCTCTGGTCCGAGACGCGGCCGGACTTCGTGAAGATCGACAAGTACTTCGTGCGCGACATCAGCGCCCACCCCGGGA
ACCTGCAGATGCTGCAGGCCATCAAGGGCATCGCCGACGTGTTCGGCACGACCCTGATCGCCGAGGGCATCGAGACCCAG
GACGACCTGCGGGCGCTGCGCGACCTCGACATTCCCTACGGCCAGGGCTACCTGCTGGGCCGGCCGGGGTCCGGGCCTCG
CGGGCGGATCGAAGTGCCCGCCCTGGACGCCGTGCGCGACCGCCGCGTGGCGATCCTGCCGCACCGCGGCCAGAACGCGC
GGCCGGGCATCCTGCGCAACCTGCTGGTGGTGCACGCGCCCACGGCCACGGCCGAGACCAGCAACGACACGGTGGCCGGC
TTCTTCAAGGCGCATCCCGAACTGCACGCCCTGCCGGTGCTCGACGGCACCCGGCCGGTGGCGCTGATCAACCGCCAGCA
ATTCATGAACCACTACGCGACGCTGTACTTCCGCGAGGTGCACGGGCGCAAGGCCTGCGCGGCCTTCGCGAACCCGGCCC
CGCGCGTGGTGGAACTCGACTGCGACGTGGACCAGCTCGTGGGCATCCTGACCTCGCAGGACCAGCGCTACCTGAGCGAC
GGATTCATCGTCACCGACAACGGCCGCTACGTGGGTCTGGGCACGGGCGAACAATTGGTGCGCAGCGTGACCGAGGCCCG
CATCGAGGCGGCGCGGCACGCCAACCCCCTCACCTTCCTGCCGGGCAACATTCCCATCAGCCTGCACATGCAGCGGCTGA
TCGACAGCGGCACGGAGTTCGTGGCCTGCTATGCCGACCTGAACCACTTCAAGCCCTTCAACGACTACTACGGCTACTGG
CGCGGCGACCAGATGATCCGCCTCGTGGCGCGGCTGGCCGTGGCGCACTGCGATGCGCAGCGGGACTTCATCGGGCACGT
GGGCGGGGACGACTTCATGCTGCTGTTCCAGAGCGGCGACTGGCTGCAGCGCTGCCAGCGCATCGTGCAGGACTTCGCGC
GCGAGGCCTTCAATCTGTTCGACGACGCCGCGCGCGCGGCCGGCGGCATCTGGGCGGAAGACCGGCACGGGGTGAAACGC
TTTTTCCCCTGCACGACGCTGGCGATCGGCGCGGCGCGCGTGGTGCCGGGCACGATGCGCCACGCCGAGGAGGTGGCCAA
TGCCGCCGCGCTGGCCAAGCACGAAGCCAAGGGCTGCGCGAGCGGCCTGGCCTGGCGCACGGCAGAGCAGGCCGCCCATC
TGGCGCACGCTTTCGGGCAGGCACCGCCGCGCGCCCGGCAGGGCTCCGCCGCCACGGCCGCAGCATCCGCCTGA

Upstream 100 bases:

>100_bases
CGCGCAGCCGTGCGGGCCGCTCCTGACGGGATTCCCCGCTGCGGGACGGACCGTGTCATTCCGACGTCATGCGAAGGGGG
TAACTTCGCGACAATTGTTC

Downstream 100 bases:

>100_bases
TCGGCTTGCGCGGCCTGCACAGGCCGCCAGCGGTCAGCGGGCCGGCGCGCCGCCCTCGAACCAGCGCCGCACGAGATCCC
GCTCGGCATCCGTCATGCCG

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 636

Protein sequence:

>637_residues
MAVTTAPVNDSTLQAVLDSLSSAVRDGTGPLVQLMREGGLHCVFQPLADLREGNVYAHEALIRGPAGTPLHTPDRLLQTA
LGEGVLQEFELLCVAIALRQWGASGGAGRLFVNISADALVRGVALCRGMTLAGAARAAGVSAENVVLEITEHERVGDMAS
LREALKQVHACGARIALDDFGDGRSSLRLWSETRPDFVKIDKYFVRDISAHPGNLQMLQAIKGIADVFGTTLIAEGIETQ
DDLRALRDLDIPYGQGYLLGRPGSGPRGRIEVPALDAVRDRRVAILPHRGQNARPGILRNLLVVHAPTATAETSNDTVAG
FFKAHPELHALPVLDGTRPVALINRQQFMNHYATLYFREVHGRKACAAFANPAPRVVELDCDVDQLVGILTSQDQRYLSD
GFIVTDNGRYVGLGTGEQLVRSVTEARIEAARHANPLTFLPGNIPISLHMQRLIDSGTEFVACYADLNHFKPFNDYYGYW
RGDQMIRLVARLAVAHCDAQRDFIGHVGGDDFMLLFQSGDWLQRCQRIVQDFAREAFNLFDDAARAAGGIWAEDRHGVKR
FFPCTTLAIGAARVVPGTMRHAEEVANAAALAKHEAKGCASGLAWRTAEQAAHLAHAFGQAPPRARQGSAATAAASA

Sequences:

>Translated_637_residues
MAVTTAPVNDSTLQAVLDSLSSAVRDGTGPLVQLMREGGLHCVFQPLADLREGNVYAHEALIRGPAGTPLHTPDRLLQTA
LGEGVLQEFELLCVAIALRQWGASGGAGRLFVNISADALVRGVALCRGMTLAGAARAAGVSAENVVLEITEHERVGDMAS
LREALKQVHACGARIALDDFGDGRSSLRLWSETRPDFVKIDKYFVRDISAHPGNLQMLQAIKGIADVFGTTLIAEGIETQ
DDLRALRDLDIPYGQGYLLGRPGSGPRGRIEVPALDAVRDRRVAILPHRGQNARPGILRNLLVVHAPTATAETSNDTVAG
FFKAHPELHALPVLDGTRPVALINRQQFMNHYATLYFREVHGRKACAAFANPAPRVVELDCDVDQLVGILTSQDQRYLSD
GFIVTDNGRYVGLGTGEQLVRSVTEARIEAARHANPLTFLPGNIPISLHMQRLIDSGTEFVACYADLNHFKPFNDYYGYW
RGDQMIRLVARLAVAHCDAQRDFIGHVGGDDFMLLFQSGDWLQRCQRIVQDFAREAFNLFDDAARAAGGIWAEDRHGVKR
FFPCTTLAIGAARVVPGTMRHAEEVANAAALAKHEAKGCASGLAWRTAEQAAHLAHAFGQAPPRARQGSAATAAASA
>Mature_636_residues
AVTTAPVNDSTLQAVLDSLSSAVRDGTGPLVQLMREGGLHCVFQPLADLREGNVYAHEALIRGPAGTPLHTPDRLLQTAL
GEGVLQEFELLCVAIALRQWGASGGAGRLFVNISADALVRGVALCRGMTLAGAARAAGVSAENVVLEITEHERVGDMASL
REALKQVHACGARIALDDFGDGRSSLRLWSETRPDFVKIDKYFVRDISAHPGNLQMLQAIKGIADVFGTTLIAEGIETQD
DLRALRDLDIPYGQGYLLGRPGSGPRGRIEVPALDAVRDRRVAILPHRGQNARPGILRNLLVVHAPTATAETSNDTVAGF
FKAHPELHALPVLDGTRPVALINRQQFMNHYATLYFREVHGRKACAAFANPAPRVVELDCDVDQLVGILTSQDQRYLSDG
FIVTDNGRYVGLGTGEQLVRSVTEARIEAARHANPLTFLPGNIPISLHMQRLIDSGTEFVACYADLNHFKPFNDYYGYWR
GDQMIRLVARLAVAHCDAQRDFIGHVGGDDFMLLFQSGDWLQRCQRIVQDFAREAFNLFDDAARAAGGIWAEDRHGVKRF
FPCTTLAIGAARVVPGTMRHAEEVANAAALAKHEAKGCASGLAWRTAEQAAHLAHAFGQAPPRARQGSAATAAASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082096, Length=257, Percent_Identity=29.5719844357977, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081845, Length=234, Percent_Identity=27.3504273504274, Blast_Score=83, Evalue=7e-17,
Organism=Escherichia coli, GI1790496, Length=233, Percent_Identity=25.7510729613734, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788849, Length=236, Percent_Identity=26.271186440678, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787055, Length=237, Percent_Identity=29.1139240506329, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI226510982, Length=231, Percent_Identity=30.7359307359307, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87081921, Length=239, Percent_Identity=28.8702928870293, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081743, Length=233, Percent_Identity=28.3261802575107, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081980, Length=232, Percent_Identity=29.3103448275862, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1787541, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788502, Length=118, Percent_Identity=32.2033898305085, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1786507, Length=124, Percent_Identity=31.4516129032258, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 68878; Mature: 68747

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTTAPVNDSTLQAVLDSLSSAVRDGTGPLVQLMREGGLHCVFQPLADLREGNVYAHEA
CCEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHCCCEEEHHH
LIRGPAGTPLHTPDRLLQTALGEGVLQEFELLCVAIALRQWGASGGAGRLFVNISADALV
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHH
RGVALCRGMTLAGAARAAGVSAENVVLEITEHERVGDMASLREALKQVHACGARIALDDF
HHHHHHCCCHHHCHHHHCCCCCCCEEEEEECCHHCCCHHHHHHHHHHHHHCCCEEEECCC
GDGRSSLRLWSETRPDFVKIDKYFVRDISAHPGNLQMLQAIKGIADVFGTTLIAEGIETQ
CCCHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
DDLRALRDLDIPYGQGYLLGRPGSGPRGRIEVPALDAVRDRRVAILPHRGQNARPGILRN
HHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCHHHHCCCCEEEECCCCCCCCCHHHHH
LLVVHAPTATAETSNDTVAGFFKAHPELHALPVLDGTRPVALINRQQFMNHYATLYFREV
HHEEECCCCCCCCCCCCEEHHHHCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHH
HGRKACAAFANPAPRVVELDCDVDQLVGILTSQDQRYLSDGFIVTDNGRYVGLGTGEQLV
CCCHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCHHHHHCCEEEECCCEEEEECCHHHHH
RSVTEARIEAARHANPLTFLPGNIPISLHMQRLIDSGTEFVACYADLNHFKPFNDYYGYW
HHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEECHHCCCCCHHHCCEE
RGDQMIRLVARLAVAHCDAQRDFIGHVGGDDFMLLFQSGDWLQRCQRIVQDFAREAFNLF
CHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
DDAARAAGGIWAEDRHGVKRFFPCTTLAIGAARVVPGTMRHAEEVANAAALAKHEAKGCA
HHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SGLAWRTAEQAAHLAHAFGQAPPRARQGSAATAAASA
HCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
AVTTAPVNDSTLQAVLDSLSSAVRDGTGPLVQLMREGGLHCVFQPLADLREGNVYAHEA
CEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHCCCEEEHHH
LIRGPAGTPLHTPDRLLQTALGEGVLQEFELLCVAIALRQWGASGGAGRLFVNISADALV
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHH
RGVALCRGMTLAGAARAAGVSAENVVLEITEHERVGDMASLREALKQVHACGARIALDDF
HHHHHHCCCHHHCHHHHCCCCCCCEEEEEECCHHCCCHHHHHHHHHHHHHCCCEEEECCC
GDGRSSLRLWSETRPDFVKIDKYFVRDISAHPGNLQMLQAIKGIADVFGTTLIAEGIETQ
CCCHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
DDLRALRDLDIPYGQGYLLGRPGSGPRGRIEVPALDAVRDRRVAILPHRGQNARPGILRN
HHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCHHHHCCCCEEEECCCCCCCCCHHHHH
LLVVHAPTATAETSNDTVAGFFKAHPELHALPVLDGTRPVALINRQQFMNHYATLYFREV
HHEEECCCCCCCCCCCCEEHHHHCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHH
HGRKACAAFANPAPRVVELDCDVDQLVGILTSQDQRYLSDGFIVTDNGRYVGLGTGEQLV
CCCHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCHHHHHCCEEEECCCEEEEECCHHHHH
RSVTEARIEAARHANPLTFLPGNIPISLHMQRLIDSGTEFVACYADLNHFKPFNDYYGYW
HHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEECHHCCCCCHHHCCEE
RGDQMIRLVARLAVAHCDAQRDFIGHVGGDDFMLLFQSGDWLQRCQRIVQDFAREAFNLF
CHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
DDAARAAGGIWAEDRHGVKRFFPCTTLAIGAARVVPGTMRHAEEVANAAALAKHEAKGCA
HHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SGLAWRTAEQAAHLAHAFGQAPPRARQGSAATAAASA
HCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]