Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609808
Identifier: 120609808
GI number: 120609808
Start: 1223643
End: 1224269
Strand: Reverse
Name: 120609808
Synonym: Aave_1117
Alternate gene names: NA
Gene position: 1224269-1223643 (Counterclockwise)
Preceding gene: 120609811
Following gene: 120609806
Centisome position: 22.87
GC content: 74.16
Gene sequence:
>627_bases ATGCCCGCCACTTTCCCCTGCAGCCCGCCACGGACCACCGATGAAGCCTTTCCCCCCCTCTTCCCACGGCTCGCCGGGCG GTGCACGCCACTGGCTGCGGGCCGGCCTGATGGCGGCCGTCGCCTCCCTCGTCGCCGCCTGCAAGTCGGGGCCGGAACCG GCCGCCCCGCCCGGCGAGACCGGCGCCCCCGCCGCCGCGGCATCCAGCGGCGTCAAGGGTCCGGAGCCGGCCACGCGCGG CTCGGCGCGCACCTCGGCCGCGGCCAATCCGCGCGCCTACCGGCAGGACGCCGCCACGCACCTCTACGGCCTGAACCAGG CACGCATCTACCGGGGCAAGCTTCCGCCCCTGCTGTACGCCATCGGTACGCTGCAGGTGGACATCGACCGCAACGGACAG GTCACCCGCCTGTCCTGGATGCGCGCGCCGCGCCACGCGCCGGAGGTGATCGCGGAAATCGAGCGCACCGTGCGCGCCGC GGCGCCCTACCCCGTGCCCGAGCGGATGGGCCGCGTGACCTATACCGACACCTGGCTCTGGCACAAGTCGGGCCGGTTCC AGCTCGACACGCTGACCGAGGGCCAGCTCTGACGCCTCCGGGCTCGGCAGTTCAGGAGCCACGGTAG
Upstream 100 bases:
>100_bases CAGACAGGCCGGGCGCCCGGCCAGCCCCTGGAGCAAGGCGTGCAGGGCGGACGTCAACGCCATGGCACGCCCCCGCGTTG GGCCATCCGGGGCCCGGCGC
Downstream 100 bases:
>100_bases GTCGAGTAGCTCCAGGGGCTGACCAGCAGCGGCACGTGGTAGTGCTGGTCGGCATGGGCGACGCCGAAGTCCAGGCTCAC GCGGTCGAGGAAGTTCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPATFPCSPPRTTDEAFPPLFPRLAGRCTPLAAGRPDGGRRLPRRRLQVGAGTGRPARRDRRPRRRGIQRRQGSGAGHAR LGAHLGRGQSARLPAGRRHAPLRPEPGTHLPGQASAPAVRHRYAAGGHRPQRTGHPPVLDARAAPRAGGDRGNRAHRARR GALPRARADGPRDLYRHLALAQVGPVPARHADRGPALTPPGSAVQEPR
Sequences:
>Translated_208_residues MPATFPCSPPRTTDEAFPPLFPRLAGRCTPLAAGRPDGGRRLPRRRLQVGAGTGRPARRDRRPRRRGIQRRQGSGAGHAR LGAHLGRGQSARLPAGRRHAPLRPEPGTHLPGQASAPAVRHRYAAGGHRPQRTGHPPVLDARAAPRAGGDRGNRAHRARR GALPRARADGPRDLYRHLALAQVGPVPARHADRGPALTPPGSAVQEPR >Mature_207_residues PATFPCSPPRTTDEAFPPLFPRLAGRCTPLAAGRPDGGRRLPRRRLQVGAGTGRPARRDRRPRRRGIQRRQGSGAGHARL GAHLGRGQSARLPAGRRHAPLRPEPGTHLPGQASAPAVRHRYAAGGHRPQRTGHPPVLDARAAPRAGGDRGNRAHRARRG ALPRARADGPRDLYRHLALAQVGPVPARHADRGPALTPPGSAVQEPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22278; Mature: 22146
Theoretical pI: Translated: 12.73; Mature: 12.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATFPCSPPRTTDEAFPPLFPRLAGRCTPLAAGRPDGGRRLPRRRLQVGAGTGRPARRD CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHH RRPRRRGIQRRQGSGAGHARLGAHLGRGQSARLPAGRRHAPLRPEPGTHLPGQASAPAVR CCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH HRYAAGGHRPQRTGHPPVLDARAAPRAGGDRGNRAHRARRGALPRARADGPRDLYRHLAL HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH AQVGPVPARHADRGPALTPPGSAVQEPR HHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PATFPCSPPRTTDEAFPPLFPRLAGRCTPLAAGRPDGGRRLPRRRLQVGAGTGRPARRD CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHH RRPRRRGIQRRQGSGAGHARLGAHLGRGQSARLPAGRRHAPLRPEPGTHLPGQASAPAVR CCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH HRYAAGGHRPQRTGHPPVLDARAAPRAGGDRGNRAHRARRGALPRARADGPRDLYRHLAL HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH AQVGPVPARHADRGPALTPPGSAVQEPR HHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA