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The map label for this gene is tse [H]

Identifier: 120609792

GI number: 120609792

Start: 1205763

End: 1207598

Strand: Reverse

Name: tse [H]

Synonym: Aave_1100

Alternate gene names: 120609792

Gene position: 1207598-1205763 (Counterclockwise)

Preceding gene: 120609793

Following gene: 120609791

Centisome position: 22.56

GC content: 70.86

Gene sequence:

>1836_bases
ATGCTCCAGACACTGCGCTCCAAGATCCTTTTCATCAGCACCGCCACGGTCGTGTGCGCGCTGGCGGTCACCGGGGCCGC
CACGTACACCATCACCCGGGCGAGCACGTTCGAGACCATCGAGCAGGACCTGAACGCGATCGCCGCCGGCAACGCCATGG
CGGTGGACCAGTGGGTGGCCTCCAAGGGCACCGCCGTGGAGGCGACGGCGGCGGCCATCGAGCACGGCGACCCGCAGGGC
TACGTGCCGCTGATGGGCAAGGCCAACGGCTTCCCCATCACCACCGTGGGCTGGGAAGACAAGACCTTCTTCTCCACCAC
CAAGACCGCCCCGGGCTACGACCCCACGGCACGCCCCTGGTACAAGACCGCGGTGCAGGCCGGCAAGCTGGCCGTCACCA
AGCCCTACGGCGACTCGACCACCGGCGTGCCCTACGTGGCGTTCGTGGCGCCGATGCTGCGCGCCGGCAAGCTCGAGGGT
GTGCTGAGCGGCGCGGTGCCGCTCGACGGCGTGCGCGAGGTGGTTGCGGCCATCCGCCCCACGCCCGGCAGCTTCGGTTT
CGTGGTCAACAGCGACGGGCAGGTCATCGCGCATGCCGACGCCAAGCTGGCGCTCAAGCCGGTCACCGAGATTTCCGCCG
TGCTGACGCCGGCCACCATGGGGTCCATCGCCACGTCGGACAAGCCGCTCGAGGTCGAGATGGACGGCGCCGACAAGCTG
CTCAAGGGCCGCCCCGTGCACGGCACGGACTGGACGCTCGTGGTGGCGCTGGACAAGGCCGAGGCCACGGCCGGCCTGCG
CAGCGTGCTGCACACCCTGGCCGTCGCGATCGTGCTGCTGGCCCTGGCCGCGGCCGGCGTCGCCGCCCTGCTCACCGCCA
CCTCCTTCCGCCGCCTCTCGCAGGTGCGCGACGCCATGGACCGCATCGGCTCCGGCGGCGGCGACCTGACCCAGCGCCTG
CCCGTGTCCGGCCGCGACGAGGTCGCCCAGATCGCCTCCTCGTTCAATGCCTTCGTCGAACAGATCGGCACGGTGCTCAA
GGATGTGCGCCACGGCGTGGAATCGATGAAGACGGCCACGGACGAGATCCGTGCCGGCAACCAGGACCTCTCCAACCGCA
CCGAGGGCTCGGCGAGCGCGCTGCAGGAAACCTCCGCGTCGCTGTCGCAGCTCACCGTCACCCTGCAGCAGTCGGCCGAA
TCCGCCGCGCAGGCCACGCGCCTGGCGAACTCGGCGAGCGCCTCCGCCCTCAAGGGCGGCGAGGTGGTGGCCAGCGCCGT
CCACACCATGGACGACATCTCCAAGGCCTCGTCCAAGATCGGCGAGATCATCGGCGTGATCGACTCCATCGCATTCCAGA
CCAACATCCTGGCGCTGAACGCGGCCGTGGAGGCCGCCCGCGCGGGCGAGCAGGGCCGCGGCTTCGCCGTCGTGGCCGGC
GAGGTGCGCAGCCTGGCGCAGCGCAGCGCGGAGGCCGCCAAGGAAATCAAGTCGCTGATCGACGCCTCGGGCGCCAGCGT
GCTCACCGGAACCGAGCGTGTGCGCGCGGCCGGCGAGACCATGGGCGAGATCGTGGACGGCATCCAGCGCGTCACGCAGA
TCATCGGCGAGATCAACGGCTCCATGGCCGAGCAGAGCTCGGGCATCGCGCAGATCAACCAGGCCGTGGCCGAGATGGAC
CGCGCCACGCAGCAGAACGCGGCGCTGGTGGAGGAATCCACCGCCGCCTCCGGCGTGCTCAACGACCAGGCGCACAACCT
GTCGCGCACCGTGGCGGGCTTCACGCTCGACGAGCGCTCCGCGCCGGAGTCCCACGCACTGGCCCTGCCGCGCTGA

Upstream 100 bases:

>100_bases
CTGCCGGGCCGCTTTTTTGCAACAGCAACGCGTTTTACGTAAAGAAAAGAAACCTTATGCGGTGTAATCAAGGCGCTTTC
CCCGTCCGAAGGTTTCCCCC

Downstream 100 bases:

>100_bases
GCGCGGACGGCCTCCCCCGACGGCACCGATGGGCATCAGCCAGAGCCAGATCGCACAGCAGGTCGTCGAATCCATCCTGG
CGCAGAAGCTGGCGCCCGGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MLQTLRSKILFISTATVVCALAVTGAATYTITRASTFETIEQDLNAIAAGNAMAVDQWVASKGTAVEATAAAIEHGDPQG
YVPLMGKANGFPITTVGWEDKTFFSTTKTAPGYDPTARPWYKTAVQAGKLAVTKPYGDSTTGVPYVAFVAPMLRAGKLEG
VLSGAVPLDGVREVVAAIRPTPGSFGFVVNSDGQVIAHADAKLALKPVTEISAVLTPATMGSIATSDKPLEVEMDGADKL
LKGRPVHGTDWTLVVALDKAEATAGLRSVLHTLAVAIVLLALAAAGVAALLTATSFRRLSQVRDAMDRIGSGGGDLTQRL
PVSGRDEVAQIASSFNAFVEQIGTVLKDVRHGVESMKTATDEIRAGNQDLSNRTEGSASALQETSASLSQLTVTLQQSAE
SAAQATRLANSASASALKGGEVVASAVHTMDDISKASSKIGEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSAEAAKEIKSLIDASGASVLTGTERVRAAGETMGEIVDGIQRVTQIIGEINGSMAEQSSGIAQINQAVAEMD
RATQQNAALVEESTAASGVLNDQAHNLSRTVAGFTLDERSAPESHALALPR

Sequences:

>Translated_611_residues
MLQTLRSKILFISTATVVCALAVTGAATYTITRASTFETIEQDLNAIAAGNAMAVDQWVASKGTAVEATAAAIEHGDPQG
YVPLMGKANGFPITTVGWEDKTFFSTTKTAPGYDPTARPWYKTAVQAGKLAVTKPYGDSTTGVPYVAFVAPMLRAGKLEG
VLSGAVPLDGVREVVAAIRPTPGSFGFVVNSDGQVIAHADAKLALKPVTEISAVLTPATMGSIATSDKPLEVEMDGADKL
LKGRPVHGTDWTLVVALDKAEATAGLRSVLHTLAVAIVLLALAAAGVAALLTATSFRRLSQVRDAMDRIGSGGGDLTQRL
PVSGRDEVAQIASSFNAFVEQIGTVLKDVRHGVESMKTATDEIRAGNQDLSNRTEGSASALQETSASLSQLTVTLQQSAE
SAAQATRLANSASASALKGGEVVASAVHTMDDISKASSKIGEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSAEAAKEIKSLIDASGASVLTGTERVRAAGETMGEIVDGIQRVTQIIGEINGSMAEQSSGIAQINQAVAEMD
RATQQNAALVEESTAASGVLNDQAHNLSRTVAGFTLDERSAPESHALALPR
>Mature_611_residues
MLQTLRSKILFISTATVVCALAVTGAATYTITRASTFETIEQDLNAIAAGNAMAVDQWVASKGTAVEATAAAIEHGDPQG
YVPLMGKANGFPITTVGWEDKTFFSTTKTAPGYDPTARPWYKTAVQAGKLAVTKPYGDSTTGVPYVAFVAPMLRAGKLEG
VLSGAVPLDGVREVVAAIRPTPGSFGFVVNSDGQVIAHADAKLALKPVTEISAVLTPATMGSIATSDKPLEVEMDGADKL
LKGRPVHGTDWTLVVALDKAEATAGLRSVLHTLAVAIVLLALAAAGVAALLTATSFRRLSQVRDAMDRIGSGGGDLTQRL
PVSGRDEVAQIASSFNAFVEQIGTVLKDVRHGVESMKTATDEIRAGNQDLSNRTEGSASALQETSASLSQLTVTLQQSAE
SAAQATRLANSASASALKGGEVVASAVHTMDDISKASSKIGEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSAEAAKEIKSLIDASGASVLTGTERVRAAGETMGEIVDGIQRVTQIIGEINGSMAEQSSGIAQINQAVAEMD
RATQQNAALVEESTAASGVLNDQAHNLSRTVAGFTLDERSAPESHALALPR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=297, Percent_Identity=53.8720538720539, Blast_Score=273, Evalue=3e-74,
Organism=Escherichia coli, GI1788195, Length=284, Percent_Identity=55.9859154929578, Blast_Score=268, Evalue=9e-73,
Organism=Escherichia coli, GI1788194, Length=296, Percent_Identity=51.3513513513513, Blast_Score=267, Evalue=2e-72,
Organism=Escherichia coli, GI1787690, Length=323, Percent_Identity=48.9164086687306, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1789453, Length=324, Percent_Identity=39.1975308641975, Blast_Score=212, Evalue=7e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 63088; Mature: 63088

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTLRSKILFISTATVVCALAVTGAATYTITRASTFETIEQDLNAIAAGNAMAVDQWVA
CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHH
SKGTAVEATAAAIEHGDPQGYVPLMGKANGFPITTVGWEDKTFFSTTKTAPGYDPTARPW
CCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCHH
YKTAVQAGKLAVTKPYGDSTTGVPYVAFVAPMLRAGKLEGVLSGAVPLDGVREVVAAIRP
HHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCC
TPGSFGFVVNSDGQVIAHADAKLALKPVTEISAVLTPATMGSIATSDKPLEVEMDGADKL
CCCCCEEEECCCCCEEEECCCCEEECHHHHHHHHHCCHHHCCCCCCCCCEEEEECCHHHH
LKGRPVHGTDWTLVVALDKAEATAGLRSVLHTLAVAIVLLALAAAGVAALLTATSFRRLS
HCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVRDAMDRIGSGGGDLTQRLPVSGRDEVAQIASSFNAFVEQIGTVLKDVRHGVESMKTAT
HHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIRAGNQDLSNRTEGSASALQETSASLSQLTVTLQQSAESAAQATRLANSASASALKGG
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCH
EVVASAVHTMDDISKASSKIGEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCEEEEHH
EVRSLAQRSAEAAKEIKSLIDASGASVLTGTERVRAAGETMGEIVDGIQRVTQIIGEING
HHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SMAEQSSGIAQINQAVAEMDRATQQNAALVEESTAASGVLNDQAHNLSRTVAGFTLDERS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEECCCC
APESHALALPR
CCCCCCCCCCC
>Mature Secondary Structure
MLQTLRSKILFISTATVVCALAVTGAATYTITRASTFETIEQDLNAIAAGNAMAVDQWVA
CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHH
SKGTAVEATAAAIEHGDPQGYVPLMGKANGFPITTVGWEDKTFFSTTKTAPGYDPTARPW
CCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCHH
YKTAVQAGKLAVTKPYGDSTTGVPYVAFVAPMLRAGKLEGVLSGAVPLDGVREVVAAIRP
HHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCC
TPGSFGFVVNSDGQVIAHADAKLALKPVTEISAVLTPATMGSIATSDKPLEVEMDGADKL
CCCCCEEEECCCCCEEEECCCCEEECHHHHHHHHHCCHHHCCCCCCCCCEEEEECCHHHH
LKGRPVHGTDWTLVVALDKAEATAGLRSVLHTLAVAIVLLALAAAGVAALLTATSFRRLS
HCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVRDAMDRIGSGGGDLTQRLPVSGRDEVAQIASSFNAFVEQIGTVLKDVRHGVESMKTAT
HHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIRAGNQDLSNRTEGSASALQETSASLSQLTVTLQQSAESAAQATRLANSASASALKGG
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCH
EVVASAVHTMDDISKASSKIGEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCEEEEHH
EVRSLAQRSAEAAKEIKSLIDASGASVLTGTERVRAAGETMGEIVDGIQRVTQIIGEING
HHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SMAEQSSGIAQINQAVAEMDRATQQNAALVEESTAASGVLNDQAHNLSRTVAGFTLDERS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEECCCC
APESHALALPR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]