Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is dctA2 [H]
Identifier: 120609793
GI number: 120609793
Start: 1207700
End: 1208977
Strand: Reverse
Name: dctA2 [H]
Synonym: Aave_1101
Alternate gene names: 120609793
Gene position: 1208977-1207700 (Counterclockwise)
Preceding gene: 120609795
Following gene: 120609792
Centisome position: 22.59
GC content: 67.37
Gene sequence:
>1278_bases ATGCATTTCCTTTTCCGCACCCTGTTCGGCCGTGTCGTGCTGGCCCTCGTGGCCGGCGTCGCCGTGGGGCTTCTGTGGCC CCAGTGGGCCGTGCAGCTCAAACCCCTGGGCGACGGCTTCATCAAGCTCATCAAGATGCTGATCCCGCTGGTGGTGTTCT GCGTCGTGGTGCACGGCATCGCCGGCACGGGGGACCTGAAGCGCGTGGGCCGCGTGGGCGTCAAGGCGCTGATCTACTTC GAGGTGGTCACCACCATCGCGCTGGCGCTGGGCCTCGTTCTCGCCTTCGTGTTCGAGCCCGGCGTGGGCATGAACGTGGA CCCGCGCGGGCTGGACGCCTCGGCGCTGAGTGCCTACACGGACAACGCCAGCAAGCTTTCGGGCGGCGGCTTCAGCGATT TCGCGCTCAAGCTCATTCCCGCCACGGCGGTGAGCGCCTTCTCCAGCGGCGACGTGCTGCAGGTGCTGTTGTTCTCGATC ATCTTCGGCTGCGCGCTGGCGCTGGTGGGCGAACGTGGCGCACGCGTGGCCGGGCTCATCGAGGATTTCTCGGTGGTGCT GTTCCGCGCCATGGGCCTCATCATCCAGCTCGCGCCGCTCGGCGTGCTGGGCGCCATCGCCTTCACCGTGGGCAAGTACG GCATCGGCTCGCTCAAGCAGCTCGGCATGCTGGTGGGGCTGTTCTACATCGCCGTGGCGCTGTTCGTGGTGGTCGTGCTC GGGCTCATCATGCGCGTCTCGGGCTTCAGCCTGTTCAAGCTGCTGCGCTACCTGCGCGAAGAGCTGGCCGTGGTGTTCGC CACCACCTCGTCCGACAGCGTGCTGCCGCAGATCATGGCCAAGCTCAAGCACATGGGCGTGCGCGACTCCACCGTGGGCC TGGTGATCCCCACCGGCTACTCGTTCAACCTGGACGCGTTCTCCATCTACATCACGCTCGCGGCCGTGTTCATCGCCCAG GCGACCAACACGCCGATCAGCATGGCCGACCTGCTGACCATCCTCGCGATCTCGCTCGTCACCTCCAAGGGCGCGCACGG CGTGCCGGGCTCGGCCATCGTGGTGCTGGCCGCCACGCTGCACGCGATCCCGGCCATTCCGGCCATCGGCCTGGTACTGG TGCTCTCGGTGGACTGGTTCATGGGCATCGCCCGCGCGCTGGGCAATCTCGTGGGCAATTGCGTAGCCACCGTGGCGATT GCCGCGTGGGAAGGCGATATCGACCGGGAGCGCGCCCGGGCCGTGCTCGACGGCCAGGATGTGCCTCCCGTGGCCTGA
Upstream 100 bases:
>100_bases AACCAGGGATTACCCGCATCCGGCCCGGCCATTTACTGTCTACATTTTTTGTATGCAAAATTGGCGCACAAGACATCGCG CCCATCCTCGGGGGTTTTCC
Downstream 100 bases:
>100_bases ACTGCCGGGCCGCTTTTTTGCAACAGCAACGCGTTTTACGTAAAGAAAAGAAACCTTATGCGGTGTAATCAAGGCGCTTT CCCCGTCCGAAGGTTTCCCC
Product: C4-dicarboxylate transporter DctA
Products: orotate [Cytoplasm]; fumarate [Cytoplasm]; malate [Cytoplasm]; Na (I) [Cytoplasm]; succinate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MHFLFRTLFGRVVLALVAGVAVGLLWPQWAVQLKPLGDGFIKLIKMLIPLVVFCVVVHGIAGTGDLKRVGRVGVKALIYF EVVTTIALALGLVLAFVFEPGVGMNVDPRGLDASALSAYTDNASKLSGGGFSDFALKLIPATAVSAFSSGDVLQVLLFSI IFGCALALVGERGARVAGLIEDFSVVLFRAMGLIIQLAPLGVLGAIAFTVGKYGIGSLKQLGMLVGLFYIAVALFVVVVL GLIMRVSGFSLFKLLRYLREELAVVFATTSSDSVLPQIMAKLKHMGVRDSTVGLVIPTGYSFNLDAFSIYITLAAVFIAQ ATNTPISMADLLTILAISLVTSKGAHGVPGSAIVVLAATLHAIPAIPAIGLVLVLSVDWFMGIARALGNLVGNCVATVAI AAWEGDIDRERARAVLDGQDVPPVA
Sequences:
>Translated_425_residues MHFLFRTLFGRVVLALVAGVAVGLLWPQWAVQLKPLGDGFIKLIKMLIPLVVFCVVVHGIAGTGDLKRVGRVGVKALIYF EVVTTIALALGLVLAFVFEPGVGMNVDPRGLDASALSAYTDNASKLSGGGFSDFALKLIPATAVSAFSSGDVLQVLLFSI IFGCALALVGERGARVAGLIEDFSVVLFRAMGLIIQLAPLGVLGAIAFTVGKYGIGSLKQLGMLVGLFYIAVALFVVVVL GLIMRVSGFSLFKLLRYLREELAVVFATTSSDSVLPQIMAKLKHMGVRDSTVGLVIPTGYSFNLDAFSIYITLAAVFIAQ ATNTPISMADLLTILAISLVTSKGAHGVPGSAIVVLAATLHAIPAIPAIGLVLVLSVDWFMGIARALGNLVGNCVATVAI AAWEGDIDRERARAVLDGQDVPPVA >Mature_425_residues MHFLFRTLFGRVVLALVAGVAVGLLWPQWAVQLKPLGDGFIKLIKMLIPLVVFCVVVHGIAGTGDLKRVGRVGVKALIYF EVVTTIALALGLVLAFVFEPGVGMNVDPRGLDASALSAYTDNASKLSGGGFSDFALKLIPATAVSAFSSGDVLQVLLFSI IFGCALALVGERGARVAGLIEDFSVVLFRAMGLIIQLAPLGVLGAIAFTVGKYGIGSLKQLGMLVGLFYIAVALFVVVVL GLIMRVSGFSLFKLLRYLREELAVVFATTSSDSVLPQIMAKLKHMGVRDSTVGLVIPTGYSFNLDAFSIYITLAAVFIAQ ATNTPISMADLLTILAISLVTSKGAHGVPGSAIVVLAATLHAIPAIPAIGLVLVLSVDWFMGIARALGNLVGNCVATVAI AAWEGDIDRERARAVLDGQDVPPVA
Specific function: Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=400, Percent_Identity=28.5, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI66773030, Length=375, Percent_Identity=24, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI5032093, Length=404, Percent_Identity=27.2277227722772, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI169790839, Length=457, Percent_Identity=22.5382932166302, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI4827012, Length=307, Percent_Identity=25.7328990228013, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI194239697, Length=485, Percent_Identity=21.8556701030928, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI223468566, Length=273, Percent_Identity=26.7399267399267, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI223468564, Length=273, Percent_Identity=26.7399267399267, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI40254478, Length=414, Percent_Identity=24.3961352657005, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI301601644, Length=160, Percent_Identity=30, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1789947, Length=416, Percent_Identity=51.6826923076923, Blast_Score=428, Evalue=1e-121, Organism=Escherichia coli, GI1790514, Length=385, Percent_Identity=40.7792207792208, Blast_Score=267, Evalue=1e-72, Organism=Escherichia coli, GI1788024, Length=415, Percent_Identity=22.8915662650602, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17537407, Length=419, Percent_Identity=25.5369928400955, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI193206654, Length=424, Percent_Identity=23.1132075471698, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71996953, Length=463, Percent_Identity=25.2699784017279, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI193206505, Length=424, Percent_Identity=23.8207547169811, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17541374, Length=408, Percent_Identity=22.3039215686275, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71983106, Length=443, Percent_Identity=22.1218961625282, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71983099, Length=443, Percent_Identity=22.1218961625282, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24583025, Length=398, Percent_Identity=24.3718592964824, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17137668, Length=398, Percent_Identity=24.3718592964824, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24583023, Length=398, Percent_Identity=24.3718592964824, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281360483, Length=451, Percent_Identity=25.7206208425721, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI17137666, Length=451, Percent_Identity=25.7206208425721, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI281360481, Length=451, Percent_Identity=25.7206208425721, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 44476; Mature: 44476
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFLFRTLFGRVVLALVAGVAVGLLWPQWAVQLKPLGDGFIKLIKMLIPLVVFCVVVHGI CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCC AGTGDLKRVGRVGVKALIYFEVVTTIALALGLVLAFVFEPGVGMNVDPRGLDASALSAYT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC DNASKLSGGGFSDFALKLIPATAVSAFSSGDVLQVLLFSIIFGCALALVGERGARVAGLI CCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EDFSVVLFRAMGLIIQLAPLGVLGAIAFTVGKYGIGSLKQLGMLVGLFYIAVALFVVVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLIMRVSGFSLFKLLRYLREELAVVFATTSSDSVLPQIMAKLKHMGVRDSTVGLVIPTGY HHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC SFNLDAFSIYITLAAVFIAQATNTPISMADLLTILAISLVTSKGAHGVPGSAIVVLAATL CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH HAIPAIPAIGLVLVLSVDWFMGIARALGNLVGNCVATVAIAAWEGDIDRERARAVLDGQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC VPPVA CCCCC >Mature Secondary Structure MHFLFRTLFGRVVLALVAGVAVGLLWPQWAVQLKPLGDGFIKLIKMLIPLVVFCVVVHGI CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCC AGTGDLKRVGRVGVKALIYFEVVTTIALALGLVLAFVFEPGVGMNVDPRGLDASALSAYT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC DNASKLSGGGFSDFALKLIPATAVSAFSSGDVLQVLLFSIIFGCALALVGERGARVAGLI CCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EDFSVVLFRAMGLIIQLAPLGVLGAIAFTVGKYGIGSLKQLGMLVGLFYIAVALFVVVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLIMRVSGFSLFKLLRYLREELAVVFATTSSDSVLPQIMAKLKHMGVRDSTVGLVIPTGY HHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC SFNLDAFSIYITLAAVFIAQATNTPISMADLLTILAISLVTSKGAHGVPGSAIVVLAATL CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH HAIPAIPAIGLVLVLSVDWFMGIARALGNLVGNCVATVAIAAWEGDIDRERARAVLDGQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC VPPVA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: orotate [Periplasm]; fumarate [Periplasm]; malate [Periplasm]; Na (I) [Periplasm]; succinate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + orotate [Periplasm] = Na (I) [Cytoplasm] + orotate [Cytoplasm] Na (I) [Periplasm] + fumarate [Periplasm] = Na (I) [Cytoplasm] + fumarate [Cytoplasm] Na (I) [Periplasm] + malate [Periplasm] = Na (I) [Cytoplasm] + malate [Cytoplasm] Na
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]