Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is maeB [H]
Identifier: 120609787
GI number: 120609787
Start: 1198899
End: 1201199
Strand: Reverse
Name: maeB [H]
Synonym: Aave_1095
Alternate gene names: 120609787
Gene position: 1201199-1198899 (Counterclockwise)
Preceding gene: 120609788
Following gene: 120609786
Centisome position: 22.44
GC content: 69.49
Gene sequence:
>2301_bases ATGACCAAGCCACTGTCCGCCGCGGAAGCGGCACTGCGCGAAGCAGCGCTCGAATACCACCGCAACCCCAGCCGCGGCAA GATCTCCGTCACGCCGACCAAGCCCCTGTCCAACCAGCGCGACCTCTCCCTGGCCTACTCGCCCGGCGTGGCCTATCCGT GCCTGGACATCCAGGCCGACCCGTCCCTGGCGGCCGAGTACACCTCCCGGGGCAACCTCGTGGGCGTGATCACCAACGGC ACGGCGGTGCTGGGCCTGGGCGACATCGGCCCGCTGGCCGGCAAGCCGGTGATGGAAGGCAAGGGGTGCCTGTTCAAGAA GTTCGCGGGTGTCGATGTGTTCGACATCGAGCTGGCCGAGCGCGACCCGGACAAGATCATCGACATCGTCGCGGCGCTGG AGCCCACGCTGGGCGGCATCAACCTGGAAGACATCAAGGCGCCGGAGTGCTTCTACATCGAGCGCGAACTCTCCAGGCGC ATGAACATCCCGGTGTTCCATGACGACCAGCACGGCACGGCCATCATCTCCAGCGCCGCCCTGCTCAACGGGCTGGAGCT GGTGGGCAAGGACATCGGCGCCGTGAAGGTGGCCGTCTCCGGCGCCGGCGCCGCCGCCATCGCCTGCCTGGACGTCATGG TCGGCCTGGGTGTCAAGCGCGAGAACATCTTCGTGTGCGACTCCAAGGGCGTGATCTACGAAGGCCGCGGCCCGCTGGAC GAATCCAAGGCCCGCTACGCCCAGAAGACGGAGGCCCGGATCCTGGCCGACGTGGTCAACGGCGCCGACGTGTTCCTGGG CTGCTCCACCGCCGGCACGCTCACGGCGGACATGGTCAAGACCATGGCGGACAAGCCCATCATCCTGGCGCTGGCCAACC CGGAACCCGAGATCCGGCCCGAACTGGCCAAGGCCGTGCGCCCGGACTGCATCATCGCCACGGGCCGTTCGGACTACCCG AACCAGGTCAACAACGTGCTGTGCTTCCCCTACATCTTCCGCGGCGCGCTCGATTGCGGCGCCACGAAGATCACGCAGGA GATGAAGCTCGCCTGCGTGCGCGAGATCGCCGACCTCGCCAAGGCCGAGATGAGCGACGAGGTGGCCGCCGCCTACGCGG GCCAGGACCTCTCCTTCGGCCCGGACTACCTCATCCCCACGCCGTTCGACGTGCGCCTGATCCTGCGCATCGCGCCCGCC GTGGCGCGCGCGGCCGAGGCATCGGGCGTGGCCACCCGCCCGATCCAGGACTACGACGCCTACCGCGACAGCCTCACGCG CTTCGTGTACCAGACCAGCATGTTCATGCGCCCGGTCTTCACCGCCGCCAAGGCCAGCCTGCAGCGCGTGGCCTATGCCG AGGGCGAGGACGAACGCGTGCTGCGCGCCGCGCAGGTGGCCGTGGACGACGGTCTCGCCCGCCCCATCCTGATCGGCCGA CCCGCCGTGATCGAGATGCGGATCAAGAAGGCCGGCCTGCGCATCCAGCTCGGCAAGGACGTGGAGGTCTGCGACCCCGA GGACGATCCGCGCTTCCGCCAGTACTGGGAGGCCTACCACCGCCTGATGGGCCGCGACGGCATCACGCCCGAGGCCGCCA AGGCCGCCGTGCGCCGCTCCAACACGCTCATCGGCGCGCTGATGGTGCGCCTGGGCGACGCGGACGCGCTGCTGTGCGGC CTGGTCGGCCGCTTCGACCACCACCTGGAGCACGTGCGCACGGTGATCGGCCTCAAGGACGGCGCCGCGGGCCTCGCGAC GGTGAATGCCCTCACGCTGGACCAGCACACGCTGTTCATCGCCGACACCTACATCCACGAGGATCCGAGCGCCGAGCAGC TCGCGCACATCGCGCAGATGGCGGCCGAGGAAGTGCAGCGCTTCGGCCTGCCGCCCAAGGTCGCGTTCCTCTCGCACTCC AACTACGGCTCGTCCACGCGCCCCTCGGCCCGCAAGATGCGCGCGGCGCGCGACCTGTTCGCGAAGGCCGCGCCGCACAT CGAGAGCGACGGCGAACTGCACGGCGACGCGGCCCTGTCGGAGAAGATCCGCCAGAACGCGCTGGAGGACAGCACGCTCA CCGGCTCGGCCAACGTGCTGATCTGCCCGAACCTGGACGCCGCGAACATCCTGTTCAACGTGCTCAAGACCACCGGCAGC CACGGCACGACCATCGGCCCGATCCTGCTGGGCGCCGCCGCCTCGGCCCACGTGCTCACACCCTCGTCCACCGTGCGCCG CGTGGTGAACATGACGGCACTGGCGGCCGCCAACGCCGTGGCCTCCAAGGCCCAGCGCTGA
Upstream 100 bases:
>100_bases CCCCATGCACATATCGCATGGGTCCAGCACTCCCCTGGCGCGGGCCCGGCGGTTAAGCTCGATAGGCATCGCCCCTGCGC CTTTTTTCCGGAACTCCCGT
Downstream 100 bases:
>100_bases CGCGCCGGGCGCCATCCCTTCGGCGCGCTGCTGGTCGCGCCGGACGGCGACACCGTGCTGGCCGAGCAGGGCAACATCGA CACGGTGAACCACGCCGAAT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 766; Mature: 765
Protein sequence:
>766_residues MTKPLSAAEAALREAALEYHRNPSRGKISVTPTKPLSNQRDLSLAYSPGVAYPCLDIQADPSLAAEYTSRGNLVGVITNG TAVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELAERDPDKIIDIVAALEPTLGGINLEDIKAPECFYIERELSRR MNIPVFHDDQHGTAIISSAALLNGLELVGKDIGAVKVAVSGAGAAAIACLDVMVGLGVKRENIFVCDSKGVIYEGRGPLD ESKARYAQKTEARILADVVNGADVFLGCSTAGTLTADMVKTMADKPIILALANPEPEIRPELAKAVRPDCIIATGRSDYP NQVNNVLCFPYIFRGALDCGATKITQEMKLACVREIADLAKAEMSDEVAAAYAGQDLSFGPDYLIPTPFDVRLILRIAPA VARAAEASGVATRPIQDYDAYRDSLTRFVYQTSMFMRPVFTAAKASLQRVAYAEGEDERVLRAAQVAVDDGLARPILIGR PAVIEMRIKKAGLRIQLGKDVEVCDPEDDPRFRQYWEAYHRLMGRDGITPEAAKAAVRRSNTLIGALMVRLGDADALLCG LVGRFDHHLEHVRTVIGLKDGAAGLATVNALTLDQHTLFIADTYIHEDPSAEQLAHIAQMAAEEVQRFGLPPKVAFLSHS NYGSSTRPSARKMRAARDLFAKAAPHIESDGELHGDAALSEKIRQNALEDSTLTGSANVLICPNLDAANILFNVLKTTGS HGTTIGPILLGAAASAHVLTPSSTVRRVVNMTALAAANAVASKAQR
Sequences:
>Translated_766_residues MTKPLSAAEAALREAALEYHRNPSRGKISVTPTKPLSNQRDLSLAYSPGVAYPCLDIQADPSLAAEYTSRGNLVGVITNG TAVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELAERDPDKIIDIVAALEPTLGGINLEDIKAPECFYIERELSRR MNIPVFHDDQHGTAIISSAALLNGLELVGKDIGAVKVAVSGAGAAAIACLDVMVGLGVKRENIFVCDSKGVIYEGRGPLD ESKARYAQKTEARILADVVNGADVFLGCSTAGTLTADMVKTMADKPIILALANPEPEIRPELAKAVRPDCIIATGRSDYP NQVNNVLCFPYIFRGALDCGATKITQEMKLACVREIADLAKAEMSDEVAAAYAGQDLSFGPDYLIPTPFDVRLILRIAPA VARAAEASGVATRPIQDYDAYRDSLTRFVYQTSMFMRPVFTAAKASLQRVAYAEGEDERVLRAAQVAVDDGLARPILIGR PAVIEMRIKKAGLRIQLGKDVEVCDPEDDPRFRQYWEAYHRLMGRDGITPEAAKAAVRRSNTLIGALMVRLGDADALLCG LVGRFDHHLEHVRTVIGLKDGAAGLATVNALTLDQHTLFIADTYIHEDPSAEQLAHIAQMAAEEVQRFGLPPKVAFLSHS NYGSSTRPSARKMRAARDLFAKAAPHIESDGELHGDAALSEKIRQNALEDSTLTGSANVLICPNLDAANILFNVLKTTGS HGTTIGPILLGAAASAHVLTPSSTVRRVVNMTALAAANAVASKAQR >Mature_765_residues TKPLSAAEAALREAALEYHRNPSRGKISVTPTKPLSNQRDLSLAYSPGVAYPCLDIQADPSLAAEYTSRGNLVGVITNGT AVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELAERDPDKIIDIVAALEPTLGGINLEDIKAPECFYIERELSRRM NIPVFHDDQHGTAIISSAALLNGLELVGKDIGAVKVAVSGAGAAAIACLDVMVGLGVKRENIFVCDSKGVIYEGRGPLDE SKARYAQKTEARILADVVNGADVFLGCSTAGTLTADMVKTMADKPIILALANPEPEIRPELAKAVRPDCIIATGRSDYPN QVNNVLCFPYIFRGALDCGATKITQEMKLACVREIADLAKAEMSDEVAAAYAGQDLSFGPDYLIPTPFDVRLILRIAPAV ARAAEASGVATRPIQDYDAYRDSLTRFVYQTSMFMRPVFTAAKASLQRVAYAEGEDERVLRAAQVAVDDGLARPILIGRP AVIEMRIKKAGLRIQLGKDVEVCDPEDDPRFRQYWEAYHRLMGRDGITPEAAKAAVRRSNTLIGALMVRLGDADALLCGL VGRFDHHLEHVRTVIGLKDGAAGLATVNALTLDQHTLFIADTYIHEDPSAEQLAHIAQMAAEEVQRFGLPPKVAFLSHSN YGSSTRPSARKMRAARDLFAKAAPHIESDGELHGDAALSEKIRQNALEDSTLTGSANVLICPNLDAANILFNVLKTTGSH GTTIGPILLGAAASAHVLTPSSTVRRVVNMTALAAANAVASKAQR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=342, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI62420882, Length=345, Percent_Identity=27.2463768115942, Blast_Score=80, Evalue=1e-14, Organism=Homo sapiens, GI62420880, Length=345, Percent_Identity=27.2463768115942, Blast_Score=80, Evalue=1e-14, Organism=Homo sapiens, GI239049447, Length=345, Percent_Identity=27.2463768115942, Blast_Score=80, Evalue=1e-14, Organism=Homo sapiens, GI4505145, Length=354, Percent_Identity=26.8361581920904, Blast_Score=71, Evalue=4e-12, Organism=Escherichia coli, GI1788806, Length=750, Percent_Identity=62.1333333333333, Blast_Score=964, Evalue=0.0, Organism=Escherichia coli, GI1788800, Length=315, Percent_Identity=31.4285714285714, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1788635, Length=354, Percent_Identity=27.683615819209, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI87081919, Length=292, Percent_Identity=25, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322823, Length=249, Percent_Identity=31.7269076305221, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI21356279, Length=506, Percent_Identity=27.6679841897233, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI281362672, Length=476, Percent_Identity=27.9411764705882, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI281362674, Length=476, Percent_Identity=27.9411764705882, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24646386, Length=402, Percent_Identity=29.3532338308458, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24646388, Length=402, Percent_Identity=29.3532338308458, Blast_Score=86, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 81903; Mature: 81772
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPLSAAEAALREAALEYHRNPSRGKISVTPTKPLSNQRDLSLAYSPGVAYPCLDIQAD CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCEEECCCC PSLAAEYTSRGNLVGVITNGTAVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELAE CCHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECC RDPDKIIDIVAALEPTLGGINLEDIKAPECFYIERELSRRMNIPVFHDDQHGTAIISSAA CCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHHCCCCEEECCCCCHHHHHHHH LLNGLELVGKDIGAVKVAVSGAGAAAIACLDVMVGLGVKRENIFVCDSKGVIYEGRGPLD HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCCCCC ESKARYAQKTEARILADVVNGADVFLGCSTAGTLTADMVKTMADKPIILALANPEPEIRP HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCH ELAKAVRPDCIIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITQEMKLACVREIADLA HHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KAEMSDEVAAAYAGQDLSFGPDYLIPTPFDVRLILRIAPAVARAAEASGVATRPIQDYDA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH YRDSLTRFVYQTSMFMRPVFTAAKASLQRVAYAEGEDERVLRAAQVAVDDGLARPILIGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECC PAVIEMRIKKAGLRIQLGKDVEVCDPEDDPRFRQYWEAYHRLMGRDGITPEAAKAAVRRS CCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC NTLIGALMVRLGDADALLCGLVGRFDHHLEHVRTVIGLKDGAAGLATVNALTLDQHTLFI CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEE ADTYIHEDPSAEQLAHIAQMAAEEVQRFGLPPKVAFLSHSNYGSSTRPSARKMRAARDLF EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH AKAAPHIESDGELHGDAALSEKIRQNALEDSTLTGSANVLICPNLDAANILFNVLKTTGS HHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCC HGTTIGPILLGAAASAHVLTPSSTVRRVVNMTALAAANAVASKAQR CCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKPLSAAEAALREAALEYHRNPSRGKISVTPTKPLSNQRDLSLAYSPGVAYPCLDIQAD CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCEEECCCC PSLAAEYTSRGNLVGVITNGTAVLGLGDIGPLAGKPVMEGKGCLFKKFAGVDVFDIELAE CCHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECC RDPDKIIDIVAALEPTLGGINLEDIKAPECFYIERELSRRMNIPVFHDDQHGTAIISSAA CCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHHCCCCEEECCCCCHHHHHHHH LLNGLELVGKDIGAVKVAVSGAGAAAIACLDVMVGLGVKRENIFVCDSKGVIYEGRGPLD HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCCCCC ESKARYAQKTEARILADVVNGADVFLGCSTAGTLTADMVKTMADKPIILALANPEPEIRP HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCH ELAKAVRPDCIIATGRSDYPNQVNNVLCFPYIFRGALDCGATKITQEMKLACVREIADLA HHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KAEMSDEVAAAYAGQDLSFGPDYLIPTPFDVRLILRIAPAVARAAEASGVATRPIQDYDA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH YRDSLTRFVYQTSMFMRPVFTAAKASLQRVAYAEGEDERVLRAAQVAVDDGLARPILIGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECC PAVIEMRIKKAGLRIQLGKDVEVCDPEDDPRFRQYWEAYHRLMGRDGITPEAAKAAVRRS CCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC NTLIGALMVRLGDADALLCGLVGRFDHHLEHVRTVIGLKDGAAGLATVNALTLDQHTLFI CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEE ADTYIHEDPSAEQLAHIAQMAAEEVQRFGLPPKVAFLSHSNYGSSTRPSARKMRAARDLF EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH AKAAPHIESDGELHGDAALSEKIRQNALEDSTLTGSANVLICPNLDAANILFNVLKTTGS HHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCC HGTTIGPILLGAAASAHVLTPSSTVRRVVNMTALAAANAVASKAQR CCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]