Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yfhC [C]
Identifier: 120609786
GI number: 120609786
Start: 1198485
End: 1198844
Strand: Reverse
Name: yfhC [C]
Synonym: Aave_1094
Alternate gene names: 120609786
Gene position: 1198844-1198485 (Counterclockwise)
Preceding gene: 120609787
Following gene: 120609785
Centisome position: 22.4
GC content: 73.61
Gene sequence:
>360_bases GTGCTGGCCGAGCAGGGCAACATCGACACGGTGAACCACGCCGAATCCACCCTCGCGCGCGAGGCCGCGGCGCGCTGGCC CGCCGGCATCCTGCGCGGCTGCACCCTCGTCACCACTTTCGAGCCCTGCGCCATGTGCGCCGGCACCATCTACTGGGCCG GCATCGGGCGCGTGCTGTACGGCGCTGAGGAGACGGCCCTGCGCGCCCTCACGGGCGATCATCCCGCGAACCCCACGCTG GACCTGCCCTGTCGCGAGGTGTTCGCACGCGGCCAGCGCGCGGTGGAGGTGGCCGGCCCGGTCCCCGAACTGCGCGATGC GCTCATCGCCGCGCACCGGGGCTTCTGGGAACGCCGCTGA
Upstream 100 bases:
>100_bases GGCACTGGCGGCCGCCAACGCCGTGGCCTCCAAGGCCCAGCGCTGACGCGCCGGGCGCCATCCCTTCGGCGCGCTGCTGG TCGCGCCGGACGGCGACACC
Downstream 100 bases:
>100_bases ACTCCCGGCGGGCAAGGGGCTGCACCATACTGGTGCAATCCGCGTGAGCGATGCCCCAGGGCCGTTGGCGGACAGGCATC GATCTTGCTGATACTCCCGG
Product: CMP/dCMP deaminase
Products: NA
Alternate protein names: Cytosine/Adenosine Deaminase; Purine Deaminase Protein; Cytidine/Deoxycytidylate Deaminase; Cytidine And Deoxycytidylate Deaminase
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MLAEQGNIDTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIGRVLYGAEETALRALTGDHPANPTL DLPCREVFARGQRAVEVAGPVPELRDALIAAHRGFWERR
Sequences:
>Translated_119_residues MLAEQGNIDTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIGRVLYGAEETALRALTGDHPANPTL DLPCREVFARGQRAVEVAGPVPELRDALIAAHRGFWERR >Mature_119_residues MLAEQGNIDTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIGRVLYGAEETALRALTGDHPANPTL DLPCREVFARGQRAVEVAGPVPELRDALIAAHRGFWERR
Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]
COG id: COG0590
COG function: function code FJ; Cytosine/adenosine deaminases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12886; Mature: 12886
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAEQGNIDTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIGRVLY CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHH GAEETALRALTGDHPANPTLDLPCREVFARGQRAVEVAGPVPELRDALIAAHRGFWERR CCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLAEQGNIDTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIGRVLY CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHH GAEETALRALTGDHPANPTLDLPCREVFARGQRAVEVAGPVPELRDALIAAHRGFWERR CCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA