Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is hisB
Identifier: 120609725
GI number: 120609725
Start: 1130903
End: 1131532
Strand: Direct
Name: hisB
Synonym: Aave_1032
Alternate gene names: 120609725
Gene position: 1130903-1131532 (Clockwise)
Preceding gene: 120609724
Following gene: 120609726
Centisome position: 21.13
GC content: 67.62
Gene sequence:
>630_bases ATGACTTCCTCCGCACTCGTTCCCTCCACCGCCTCCGAGGGCGACCGCATCGCCGAGGTCGCCCGCAACACCGCCGAGAC CCGCATCCGCGTGCGCGTGAACCTCGACGGCACGGGCAATGCCCGCCTGTCCTCGGGCATCGGCTTCTTCGACCACATGC TCGACCAGATCGCGCGGCACGGCCTGATCGACCTGGACATCGAGTGCGAGGGCGACCTGCACATCGACGGACACCACACG GTGGAAGACGTGGGCATCACGCTGGGCCAGGCGTTCGCGCGGGCCGTGGGCGACAAGAAGGGCATCCGCCGCTACGGCCA TGCCTATGTGCCGCTCGACGAGGCGCTCTCGCGCGTGGTGGTCGATTTCTCGGGCCGGCCGGGCCTGCACATGGACGTGA AGTTCACGGCCGGCAGCATCGGCCAGCTCGATACCCAGCTGGTGTACGAGTTCTTCCAGGGCTTCGTGAACCATGCGGGC GTGACGCTGCACATCGACAACCTGAAGGGCTTCAATGCCCACCACCAGTGCGAAACCATCTTCAAGGCCTTCGCGCGAGC GCTGCGCGCAGCGCTCGCGCGCGACCCGCGCTCGGCCGGCGTCATTCCCTCCACCAAGGGCTCGCTCTAG
Upstream 100 bases:
>100_bases ACGTTTCTACAATGCATCCCTTGCTGGCCCGCTGCCTGCGCCTCACGGTGGGCAGCGAGGCCGACAACGCCCAGATGCTC GACGCGCTCCAGGCTTCCCT
Downstream 100 bases:
>100_bases GCTGCCACCATGAATGTTGAAGCAAAGACTGTCGCCGTCGTGGACTACGGCATGGGGAACCTGCGCTCGGTGTCCCAGGC CGTGCAGGCCGCCGCCGAGG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTSSALVPSTASEGDRIAEVARNTAETRIRVRVNLDGTGNARLSSGIGFFDHMLDQIARHGLIDLDIECEGDLHIDGHHT VEDVGITLGQAFARAVGDKKGIRRYGHAYVPLDEALSRVVVDFSGRPGLHMDVKFTAGSIGQLDTQLVYEFFQGFVNHAG VTLHIDNLKGFNAHHQCETIFKAFARALRAALARDPRSAGVIPSTKGSL
Sequences:
>Translated_209_residues MTSSALVPSTASEGDRIAEVARNTAETRIRVRVNLDGTGNARLSSGIGFFDHMLDQIARHGLIDLDIECEGDLHIDGHHT VEDVGITLGQAFARAVGDKKGIRRYGHAYVPLDEALSRVVVDFSGRPGLHMDVKFTAGSIGQLDTQLVYEFFQGFVNHAG VTLHIDNLKGFNAHHQCETIFKAFARALRAALARDPRSAGVIPSTKGSL >Mature_208_residues TSSALVPSTASEGDRIAEVARNTAETRIRVRVNLDGTGNARLSSGIGFFDHMLDQIARHGLIDLDIECEGDLHIDGHHTV EDVGITLGQAFARAVGDKKGIRRYGHAYVPLDEALSRVVVDFSGRPGLHMDVKFTAGSIGQLDTQLVYEFFQGFVNHAGV TLHIDNLKGFNAHHQCETIFKAFARALRAALARDPRSAGVIPSTKGSL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=196, Percent_Identity=49.4897959183673, Blast_Score=186, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6324776, Length=219, Percent_Identity=39.7260273972603, Blast_Score=162, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_ACIAC (A1TKZ1)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969403.1 - ProteinModelPortal: A1TKZ1 - SMR: A1TKZ1 - STRING: A1TKZ1 - GeneID: 4669510 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1032 - NMPDR: fig|397945.5.peg.897 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - PhylomeDB: A1TKZ1 - ProtClustDB: PRK00951 - BioCyc: AAVE397945:AAVE_1032-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22617; Mature: 22486
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSALVPSTASEGDRIAEVARNTAETRIRVRVNLDGTGNARLSSGIGFFDHMLDQIARH CCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHC GLIDLDIECEGDLHIDGHHTVEDVGITLGQAFARAVGDKKGIRRYGHAYVPLDEALSRVV CCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHH VDFSGRPGLHMDVKFTAGSIGQLDTQLVYEFFQGFVNHAGVTLHIDNLKGFNAHHQCETI HCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH FKAFARALRAALARDPRSAGVIPSTKGSL HHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TSSALVPSTASEGDRIAEVARNTAETRIRVRVNLDGTGNARLSSGIGFFDHMLDQIARH CCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHC GLIDLDIECEGDLHIDGHHTVEDVGITLGQAFARAVGDKKGIRRYGHAYVPLDEALSRVV CCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHH VDFSGRPGLHMDVKFTAGSIGQLDTQLVYEFFQGFVNHAGVTLHIDNLKGFNAHHQCETI HCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH FKAFARALRAALARDPRSAGVIPSTKGSL HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA