Click here to switch to the map view.

The map label for this gene is 120609288

Identifier: 120609288

GI number: 120609288

Start: 641055

End: 642983

Strand: Direct

Name: 120609288

Synonym: Aave_0588

Alternate gene names: NA

Gene position: 641055-642983 (Clockwise)

Preceding gene: 120609287

Following gene: 120609289

Centisome position: 11.98

GC content: 66.56

Gene sequence:

>1929_bases
ATGAGCGATGAGACAGCGGGCGGCGTGGTCGACGAGGTCATGACGTATTTCCAGAAGTATCAGAAACTCAGGTCCAACCC
GGCGGTGTCCAGCGATGTCGCCGCGCGCATGCTGCCCGGTGCACTGAAGATGGCCCGGCGCGGCCTGGATGCCGTGCCAT
TCCTGAGCTTCATGCAGGTCAACAGCGTCCAGGGCCAGCGTGCACGGCAGTTTCTTCCGCAGCAGCTGGCGACCTTGGCC
GGTGACCTCTCGGATGAACTGCTCAACGCTTTCTACGGGGAAAACACCGGAGGCAAGCTCCAATGGCGCATGGATGCGGC
CGCTGCCGACCGGAGGCGGATGACACCGGATTTCGATCGGGAACTCAACGACTATCTGCGGGGCCTGGACGGCACTCTGC
GGCAGCTCGAACCCTGCATGGACGCGATGTCGGTCGCGATCAAGAGCATGGGCACGATGGAGGAAGTCAAAACCGACGCG
GACATGGCCGGTATTCTCAAGCGCGCCGTGGTCGACCTCACGGAAATGCGGTTGAACCGGATCGAGCGGCACCTCGAAGG
CATCCGGCTGTGCCTCCAGCGCCTCTACATGGAACCGGAGCTGGTCGGTACACCGGCCGGAATCGCGCTCGGTGCGCTGA
AAACTCTCACCGCCGACCATGAGGAAATGCTGAACGCACTCGACGTGCTGCTGGATGCACGTGCTCCCATCTCCCCCGAT
AAAGCGGCGCAACTGCAGAGGCAACTGGACGCGCTGCTGGGCGCCGCGCGGGCATTCGTGGAGGCCGCCGGCGCGCAGTT
CTCCTCCGAAGGTGACGATCCGTACATCCCTACCGTGCGCCTGGCGCCGCACATCCTGCACTCTGTCGCGCGCATCGCTG
GCGAAATGGAGGACGCCCTGGGGGCCTACAAGCTGCCGCCGTCCGTGGTCAGGCACGTGCAGGGAACCACCTATATGGGC
CAGGCCATCGGCCGGCATGCGGCGATCCGCCATCCGGCCGACAGCGTGGAGTCCGCCGGAAAGATGGAAGTCGCACCCGA
CAGACCGGCTCCCGTGGCACCGCAACGGCGCAAGGCGCAGGCACGGTCCAGAGTGCACAGGAAGGCTCCGCAGAGCGACA
GCGGAACCTCGACCTCCGGCACGCAGGACACTGCGTGCGGTGCCCTGCTGCAAATGGCGCGCGAACGCCTGGGCGCCTTC
AATCGCCCGCCCCAGGCCGGGGTGACCAGCCTGGACGACGTGGTCGCGGTGGGTGCATCGCTCCGCAAGGACACATCGGC
CCTGCAGGTCTATCGCAACGCCGACAGCGATCCGCTGGAAGTCGGCAGGCAGATGCGGCTGGCGCTCGACAGCTGGTTTG
GCCATGCGGGCCGCTGGAAGGGCGTGCAGGACCAGTTGCAGGCATTGCAGGACAGTGACGGCGGGGCGCTGGCGAAAGAC
CTCCTGAGGAAAATCCGCGAGGAGCGGATCGAGCCGCTCAGGCAGCTGCACGCGCAGATCGATGCCGTGGAACTGGATCG
GGTCAAGACCTTCGCGTATCCCCGGCTCAAGCACGTGGAGCACCTGATGCAGGCCGACCCACAGGGCCGGATCCTGAAGG
TCGGCGCGCCCGTACCGCTGCGCTCGCAGGGCTTCGACGGCCGGAACCGCGCCACGCTCTTCGAGGTGGCGCTGGATGTC
GGAACGCTCGCGAACGGCCAGCCCGCGCCGCCGCTCTACGTGCACCTGCACACCCGGCAACCGGTCACGGCCGAAACCTG
CCGCACCATCGCATTCGACGACCTGGACGCCGTTCACGTCAAGAATGCGGAGCAGCGCGGAAAGGGGCGCACCTGGGAGG
TGCTCAACAACGCCCTCGACAGCGTGCACCGCGGCCCCCTCGACGCGAAGGTGCTCGAGCAGCTGCAGCAGCGCATGGCC
CGGGACTGA

Upstream 100 bases:

>100_bases
CCCCCGCACGCAGGCCGCGAGGCTGTCGCCGGAAAACCGGGCGCAGGACCGGCCGCCGAGGGCTGCGCTGCCCGCGCGGG
TTCGTGCCGCGCCTCCAGCC

Downstream 100 bases:

>100_bases
TGCCGCCACGGCGGGCGCCGCGCGGGCCGCGCACCTGCAAGAATGCCGTCTCCATCCGAACGCATTCCTGAAGGAGACAA
CGCACCATGACTGCACCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Effector

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MSDETAGGVVDEVMTYFQKYQKLRSNPAVSSDVAARMLPGALKMARRGLDAVPFLSFMQVNSVQGQRARQFLPQQLATLA
GDLSDELLNAFYGENTGGKLQWRMDAAAADRRRMTPDFDRELNDYLRGLDGTLRQLEPCMDAMSVAIKSMGTMEEVKTDA
DMAGILKRAVVDLTEMRLNRIERHLEGIRLCLQRLYMEPELVGTPAGIALGALKTLTADHEEMLNALDVLLDARAPISPD
KAAQLQRQLDALLGAARAFVEAAGAQFSSEGDDPYIPTVRLAPHILHSVARIAGEMEDALGAYKLPPSVVRHVQGTTYMG
QAIGRHAAIRHPADSVESAGKMEVAPDRPAPVAPQRRKAQARSRVHRKAPQSDSGTSTSGTQDTACGALLQMARERLGAF
NRPPQAGVTSLDDVVAVGASLRKDTSALQVYRNADSDPLEVGRQMRLALDSWFGHAGRWKGVQDQLQALQDSDGGALAKD
LLRKIREERIEPLRQLHAQIDAVELDRVKTFAYPRLKHVEHLMQADPQGRILKVGAPVPLRSQGFDGRNRATLFEVALDV
GTLANGQPAPPLYVHLHTRQPVTAETCRTIAFDDLDAVHVKNAEQRGKGRTWEVLNNALDSVHRGPLDAKVLEQLQQRMA
RD

Sequences:

>Translated_642_residues
MSDETAGGVVDEVMTYFQKYQKLRSNPAVSSDVAARMLPGALKMARRGLDAVPFLSFMQVNSVQGQRARQFLPQQLATLA
GDLSDELLNAFYGENTGGKLQWRMDAAAADRRRMTPDFDRELNDYLRGLDGTLRQLEPCMDAMSVAIKSMGTMEEVKTDA
DMAGILKRAVVDLTEMRLNRIERHLEGIRLCLQRLYMEPELVGTPAGIALGALKTLTADHEEMLNALDVLLDARAPISPD
KAAQLQRQLDALLGAARAFVEAAGAQFSSEGDDPYIPTVRLAPHILHSVARIAGEMEDALGAYKLPPSVVRHVQGTTYMG
QAIGRHAAIRHPADSVESAGKMEVAPDRPAPVAPQRRKAQARSRVHRKAPQSDSGTSTSGTQDTACGALLQMARERLGAF
NRPPQAGVTSLDDVVAVGASLRKDTSALQVYRNADSDPLEVGRQMRLALDSWFGHAGRWKGVQDQLQALQDSDGGALAKD
LLRKIREERIEPLRQLHAQIDAVELDRVKTFAYPRLKHVEHLMQADPQGRILKVGAPVPLRSQGFDGRNRATLFEVALDV
GTLANGQPAPPLYVHLHTRQPVTAETCRTIAFDDLDAVHVKNAEQRGKGRTWEVLNNALDSVHRGPLDAKVLEQLQQRMA
RD
>Mature_641_residues
SDETAGGVVDEVMTYFQKYQKLRSNPAVSSDVAARMLPGALKMARRGLDAVPFLSFMQVNSVQGQRARQFLPQQLATLAG
DLSDELLNAFYGENTGGKLQWRMDAAAADRRRMTPDFDRELNDYLRGLDGTLRQLEPCMDAMSVAIKSMGTMEEVKTDAD
MAGILKRAVVDLTEMRLNRIERHLEGIRLCLQRLYMEPELVGTPAGIALGALKTLTADHEEMLNALDVLLDARAPISPDK
AAQLQRQLDALLGAARAFVEAAGAQFSSEGDDPYIPTVRLAPHILHSVARIAGEMEDALGAYKLPPSVVRHVQGTTYMGQ
AIGRHAAIRHPADSVESAGKMEVAPDRPAPVAPQRRKAQARSRVHRKAPQSDSGTSTSGTQDTACGALLQMARERLGAFN
RPPQAGVTSLDDVVAVGASLRKDTSALQVYRNADSDPLEVGRQMRLALDSWFGHAGRWKGVQDQLQALQDSDGGALAKDL
LRKIREERIEPLRQLHAQIDAVELDRVKTFAYPRLKHVEHLMQADPQGRILKVGAPVPLRSQGFDGRNRATLFEVALDVG
TLANGQPAPPLYVHLHTRQPVTAETCRTIAFDDLDAVHVKNAEQRGKGRTWEVLNNALDSVHRGPLDAKVLEQLQQRMAR
D

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70430; Mature: 70299

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDETAGGVVDEVMTYFQKYQKLRSNPAVSSDVAARMLPGALKMARRGLDAVPFLSFMQV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NSVQGQRARQFLPQQLATLAGDLSDELLNAFYGENTGGKLQWRMDAAAADRRRMTPDFDR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCCHHH
ELNDYLRGLDGTLRQLEPCMDAMSVAIKSMGTMEEVKTDADMAGILKRAVVDLTEMRLNR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERHLEGIRLCLQRLYMEPELVGTPAGIALGALKTLTADHEEMLNALDVLLDARAPISPD
HHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCH
KAAQLQRQLDALLGAARAFVEAAGAQFSSEGDDPYIPTVRLAPHILHSVARIAGEMEDAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GAYKLPPSVVRHVQGTTYMGQAIGRHAAIRHPADSVESAGKMEVAPDRPAPVAPQRRKAQ
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCCCCCCCHHHHHH
ARSRVHRKAPQSDSGTSTSGTQDTACGALLQMARERLGAFNRPPQAGVTSLDDVVAVGAS
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LRKDTSALQVYRNADSDPLEVGRQMRLALDSWFGHAGRWKGVQDQLQALQDSDGGALAKD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHH
LLRKIREERIEPLRQLHAQIDAVELDRVKTFAYPRLKHVEHLMQADPQGRILKVGAPVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
RSQGFDGRNRATLFEVALDVGTLANGQPAPPLYVHLHTRQPVTAETCRTIAFDDLDAVHV
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHH
KNAEQRGKGRTWEVLNNALDSVHRGPLDAKVLEQLQQRMARD
CCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDETAGGVVDEVMTYFQKYQKLRSNPAVSSDVAARMLPGALKMARRGLDAVPFLSFMQV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NSVQGQRARQFLPQQLATLAGDLSDELLNAFYGENTGGKLQWRMDAAAADRRRMTPDFDR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCCHHH
ELNDYLRGLDGTLRQLEPCMDAMSVAIKSMGTMEEVKTDADMAGILKRAVVDLTEMRLNR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERHLEGIRLCLQRLYMEPELVGTPAGIALGALKTLTADHEEMLNALDVLLDARAPISPD
HHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCH
KAAQLQRQLDALLGAARAFVEAAGAQFSSEGDDPYIPTVRLAPHILHSVARIAGEMEDAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GAYKLPPSVVRHVQGTTYMGQAIGRHAAIRHPADSVESAGKMEVAPDRPAPVAPQRRKAQ
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCCCCCCCHHHHHH
ARSRVHRKAPQSDSGTSTSGTQDTACGALLQMARERLGAFNRPPQAGVTSLDDVVAVGAS
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LRKDTSALQVYRNADSDPLEVGRQMRLALDSWFGHAGRWKGVQDQLQALQDSDGGALAKD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHH
LLRKIREERIEPLRQLHAQIDAVELDRVKTFAYPRLKHVEHLMQADPQGRILKVGAPVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
RSQGFDGRNRATLFEVALDVGTLANGQPAPPLYVHLHTRQPVTAETCRTIAFDDLDAVHV
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHH
KNAEQRGKGRTWEVLNNALDSVHRGPLDAKVLEQLQQRMARD
CCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA