Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is ywrD [H]
Identifier: 120609289
GI number: 120609289
Start: 643070
End: 644686
Strand: Direct
Name: ywrD [H]
Synonym: Aave_0589
Alternate gene names: 120609289
Gene position: 643070-644686 (Clockwise)
Preceding gene: 120609288
Following gene: 120609293
Centisome position: 12.01
GC content: 73.65
Gene sequence:
>1617_bases ATGACTGCACCCCACGGCGACCGCGCCATCGATTGGACCCTGCCCTATGCCTCGCACCGCAGCGCGGTCATGGGCCGCAA TGTCGTTTCCACCTCGCAGCCCCTGGCCGCCCAGGCCGGGCTGCGGATGCTGCAGGCGGGCGGCAATGCGGTCGATGCGG CCCTGGCCGCGGCGATGGTGCTCACCGTGGTCGAGCCCACGGGCTGCGGCATCGGCAGCGATGCATTCGCCATCGTATGG GACGGCCAGGAACTGCACGGCCTGAACGCCTCGGGGCGGGCCCCCGCCGCCTGGACACCCGGCTACTTCGCCGAGCGCGG CGGCATCCCGGAGACGGGCTGGAACGCCGTGACGGTGCCGGGCGCCGTCTCGGGCTGGGTGGCGCTCTCGCGGCGCTTCG GCCGCCTGCCTTTCGCGCAGCTCGCGCAGCCGGCCATCGATTACGCGCGCGGCGGTTTCGCCGTCTCGCCCACCATCGCC CGGCAATGGGCGCTGGGGGCCGCCAGGCTGGGGAGCCAGCCGGGGTTCGCCGAATGCTTCCTGCCCGGCGGCCGCGCGCC GCGCGCGGGCGAGATCTTCCGCAGCGAAGCCCATGCCCGCACGCTGGAGCGCATCGCCGTCACCGGGGGCGAGGACTTCT ACCGGGGCGAACTGGCCCGGCAGATGGCCGCGCACGCCCGCGCGAACGGCGGCGCGATGACCGAGGACGATCTCGCGGCC CACCAGGCCGACTGGGTGGGTACCGTGAGCCGGCGCTTCGGTGACTCCGTGATCCACGAGATTCCGCCCAACGGTCAGGG CATCGCGGCGCTGATGGCGCTGGGCATGCTGGATGTGGCCGGCATCGGCGCGCAGCCGGTGGACCATGTGGACACCGTGC ACGCGAGCATCGAGGCGATGAAGCTCGCGCTGGCCGACCTGTACCGCCACAACGCCGATGCCGATGCCATGCGGGTGGCC GCGCGCGACCTGCTGTCGGATGCCTACGTGCGCGAGCGCGCCGCGCTCATCGACCCGGCCCGCGCGGGCGATCCCGGCCA CGGCATGCCGCGCCCGGGCGGCACCGTGTACCTCGCCGCGGCCGACGAGAGCGGCATGATGGTCTCCTTCATCCAGTCCA ACTACATGGGCTTCGGCTCCGGAGTGGTGGTGCCGGGTACGGGCATCAGCCTGCAGAACCGTGGTCACTGCTTCACCGCC GAGGCAGGGCACGCGAACGAGGTGGCGCCGCGCAAGCGCCCCTCGCACACCATCATCCCGGCCTTCGCCACGGATGCCGA CGGCGCGCCGCGCATGGCCTTCGGCGTCATGGGCGGGCCGATGCAGTCGCAGGGCCACGTGCAGATGGCGCTGCGCGTGC TGCGCTACGGCCAGAACCCCCAGGCCGCTGCCGATGCACCGCGCTGGCGCGTGACGGGCGGCCGCGGCGTGGCCGTGGAG CCGGCATTCGATCCCGCCGTGGTCGGGGCGCTGCGCGCGCGCGGCCACGACGTGGCGGTGGAGGCGGGTGATGGCGTCTT CGCGTTCGGCGGCGCCCAGTTGGTGCTGCGGCTGGACAGCGGCGCCTACGCCGCGGGTTCGGACCCGCGCAAGGACGGGC ACGCCGTCGCGTACTGA
Upstream 100 bases:
>100_bases TGGCCCGGGACTGATGCCGCCACGGCGGGCGCCGCGCGGGCCGCGCACCTGCAAGAATGCCGTCTCCATCCGAACGCATT CCTGAAGGAGACAACGCACC
Downstream 100 bases:
>100_bases GCGTTGCCCACAAGCCCCGTCCCCGCCCGCGGCCCCCGTGGGGGCGGTGCCGCGTCAGCGCCGCGCCAGCAGCATCGCGT CGCCGTAGCTGAAGAACCGG
Product: gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTAPHGDRAIDWTLPYASHRSAVMGRNVVSTSQPLAAQAGLRMLQAGGNAVDAALAAAMVLTVVEPTGCGIGSDAFAIVW DGQELHGLNASGRAPAAWTPGYFAERGGIPETGWNAVTVPGAVSGWVALSRRFGRLPFAQLAQPAIDYARGGFAVSPTIA RQWALGAARLGSQPGFAECFLPGGRAPRAGEIFRSEAHARTLERIAVTGGEDFYRGELARQMAAHARANGGAMTEDDLAA HQADWVGTVSRRFGDSVIHEIPPNGQGIAALMALGMLDVAGIGAQPVDHVDTVHASIEAMKLALADLYRHNADADAMRVA ARDLLSDAYVRERAALIDPARAGDPGHGMPRPGGTVYLAAADESGMMVSFIQSNYMGFGSGVVVPGTGISLQNRGHCFTA EAGHANEVAPRKRPSHTIIPAFATDADGAPRMAFGVMGGPMQSQGHVQMALRVLRYGQNPQAAADAPRWRVTGGRGVAVE PAFDPAVVGALRARGHDVAVEAGDGVFAFGGAQLVLRLDSGAYAAGSDPRKDGHAVAY
Sequences:
>Translated_538_residues MTAPHGDRAIDWTLPYASHRSAVMGRNVVSTSQPLAAQAGLRMLQAGGNAVDAALAAAMVLTVVEPTGCGIGSDAFAIVW DGQELHGLNASGRAPAAWTPGYFAERGGIPETGWNAVTVPGAVSGWVALSRRFGRLPFAQLAQPAIDYARGGFAVSPTIA RQWALGAARLGSQPGFAECFLPGGRAPRAGEIFRSEAHARTLERIAVTGGEDFYRGELARQMAAHARANGGAMTEDDLAA HQADWVGTVSRRFGDSVIHEIPPNGQGIAALMALGMLDVAGIGAQPVDHVDTVHASIEAMKLALADLYRHNADADAMRVA ARDLLSDAYVRERAALIDPARAGDPGHGMPRPGGTVYLAAADESGMMVSFIQSNYMGFGSGVVVPGTGISLQNRGHCFTA EAGHANEVAPRKRPSHTIIPAFATDADGAPRMAFGVMGGPMQSQGHVQMALRVLRYGQNPQAAADAPRWRVTGGRGVAVE PAFDPAVVGALRARGHDVAVEAGDGVFAFGGAQLVLRLDSGAYAAGSDPRKDGHAVAY >Mature_537_residues TAPHGDRAIDWTLPYASHRSAVMGRNVVSTSQPLAAQAGLRMLQAGGNAVDAALAAAMVLTVVEPTGCGIGSDAFAIVWD GQELHGLNASGRAPAAWTPGYFAERGGIPETGWNAVTVPGAVSGWVALSRRFGRLPFAQLAQPAIDYARGGFAVSPTIAR QWALGAARLGSQPGFAECFLPGGRAPRAGEIFRSEAHARTLERIAVTGGEDFYRGELARQMAAHARANGGAMTEDDLAAH QADWVGTVSRRFGDSVIHEIPPNGQGIAALMALGMLDVAGIGAQPVDHVDTVHASIEAMKLALADLYRHNADADAMRVAA RDLLSDAYVRERAALIDPARAGDPGHGMPRPGGTVYLAAADESGMMVSFIQSNYMGFGSGVVVPGTGISLQNRGHCFTAE AGHANEVAPRKRPSHTIIPAFATDADGAPRMAFGVMGGPMQSQGHVQMALRVLRYGQNPQAAADAPRWRVTGGRGVAVEP AFDPAVVGALRARGHDVAVEAGDGVFAFGGAQLVLRLDSGAYAAGSDPRKDGHAVAY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=556, Percent_Identity=28.2374100719424, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI73915090, Length=556, Percent_Identity=28.2374100719424, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI73915096, Length=556, Percent_Identity=28.2374100719424, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI73915094, Length=556, Percent_Identity=28.2374100719424, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI113429324, Length=556, Percent_Identity=27.5179856115108, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI113429326, Length=561, Percent_Identity=27.6292335115865, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI153266885, Length=544, Percent_Identity=26.8382352941176, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI153266901, Length=545, Percent_Identity=26.7889908256881, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI153266907, Length=540, Percent_Identity=25.9259259259259, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI109148539, Length=489, Percent_Identity=28.0163599182004, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI30581157, Length=210, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI30581155, Length=210, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789856, Length=531, Percent_Identity=28.6252354048964, Blast_Score=182, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17506189, Length=539, Percent_Identity=26.1595547309833, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI212646519, Length=465, Percent_Identity=26.0215053763441, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI72000294, Length=465, Percent_Identity=26.0215053763441, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI193208247, Length=508, Percent_Identity=25.7874015748031, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI193208245, Length=508, Percent_Identity=25.7874015748031, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI161077878, Length=534, Percent_Identity=26.2172284644195, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24642670, Length=534, Percent_Identity=26.2172284644195, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24642666, Length=534, Percent_Identity=26.2172284644195, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI161077880, Length=534, Percent_Identity=26.2172284644195, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI45551474, Length=534, Percent_Identity=26.2172284644195, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI18859893, Length=498, Percent_Identity=26.7068273092369, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI161077496, Length=505, Percent_Identity=25.1485148514851, Blast_Score=112, Evalue=7e-25, Organism=Drosophila melanogaster, GI18859741, Length=525, Percent_Identity=24.952380952381, Blast_Score=109, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 55908; Mature: 55776
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPHGDRAIDWTLPYASHRSAVMGRNVVSTSQPLAAQAGLRMLQAGGNAVDAALAAAMV CCCCCCCCEEEEECCCCCCCHHHHCCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH LTVVEPTGCGIGSDAFAIVWDGQELHGLNASGRAPAAWTPGYFAERGGIPETGWNAVTVP HHEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECC GAVSGWVALSRRFGRLPFAQLAQPAIDYARGGFAVSPTIARQWALGAARLGSQPGFAECF CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCCEEEE LPGGRAPRAGEIFRSEAHARTLERIAVTGGEDFYRGELARQMAAHARANGGAMTEDDLAA CCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH HQADWVGTVSRRFGDSVIHEIPPNGQGIAALMALGMLDVAGIGAQPVDHVDTVHASIEAM HHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH KLALADLYRHNADADAMRVAARDLLSDAYVRERAALIDPARAGDPGHGMPRPGGTVYLAA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE ADESGMMVSFIQSNYMGFGSGVVVPGTGISLQNRGHCFTAEAGHANEVAPRKRPSHTIIP ECCCCCEEEEEHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEE AFATDADGAPRMAFGVMGGPMQSQGHVQMALRVLRYGQNPQAAADAPRWRVTGGRGVAVE EEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEC PAFDPAVVGALRARGHDVAVEAGDGVFAFGGAQLVLRLDSGAYAAGSDPRKDGHAVAY CCCCHHHHHHHHHCCCEEEEECCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAPHGDRAIDWTLPYASHRSAVMGRNVVSTSQPLAAQAGLRMLQAGGNAVDAALAAAMV CCCCCCCEEEEECCCCCCCHHHHCCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH LTVVEPTGCGIGSDAFAIVWDGQELHGLNASGRAPAAWTPGYFAERGGIPETGWNAVTVP HHEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECC GAVSGWVALSRRFGRLPFAQLAQPAIDYARGGFAVSPTIARQWALGAARLGSQPGFAECF CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCCEEEE LPGGRAPRAGEIFRSEAHARTLERIAVTGGEDFYRGELARQMAAHARANGGAMTEDDLAA CCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH HQADWVGTVSRRFGDSVIHEIPPNGQGIAALMALGMLDVAGIGAQPVDHVDTVHASIEAM HHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH KLALADLYRHNADADAMRVAARDLLSDAYVRERAALIDPARAGDPGHGMPRPGGTVYLAA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE ADESGMMVSFIQSNYMGFGSGVVVPGTGISLQNRGHCFTAEAGHANEVAPRKRPSHTIIP ECCCCCEEEEEHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEE AFATDADGAPRMAFGVMGGPMQSQGHVQMALRVLRYGQNPQAAADAPRWRVTGGRGVAVE EEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEC PAFDPAVVGALRARGHDVAVEAGDGVFAFGGAQLVLRLDSGAYAAGSDPRKDGHAVAY CCCCHHHHHHHHHCCCEEEEECCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]