Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609235
Identifier: 120609235
GI number: 120609235
Start: 577229
End: 578026
Strand: Direct
Name: 120609235
Synonym: Aave_0534
Alternate gene names: NA
Gene position: 577229-578026 (Clockwise)
Preceding gene: 120609234
Following gene: 120609236
Centisome position: 10.78
GC content: 60.28
Gene sequence:
>798_bases ATGGCAGGTGAAGAAAAATCGAAGGACAGCGCGAAGGAGGGGCTGCCCCATCTCAGCCTGATGGAAAAGGCGTGGGATGC TCAGTGGGTGATGCGGTTCGTGTGCATCGTGCTTTTCATTGATGGCGCACTGGTTCTGAAAGGGGGCAGCGGGTTGCTTC AGTGGTCCACATCCACCGACAAGCTGTGGCAGGACCTGGGTTTCCTGGTCGTTGCGGCGGCAAGCTTCGGACTGCTCGTC AGCTTCGTGTTGCCGACGCTGGGCATTTTCTTGTGCTGGATCGGCTACCACAGCCGCCGACTCGCTCGCCACGTCCTTGA GGTCGAAGACCGTGATGACTTTGGTGGGGCGTATGGTCATGTAGACGCCCATAGGTTTCATGTGTATGCCCTGGAGAAGG AAAGCGATTTCCTGCTGCGAATGTATGAGAACGCCTGGCGGCGTGAGGTGCAGCGCCGCGAGGAACTTGATCAGATCGGC AATCTGGTCTTTGCGACGGCATTTCTCGCGGTCGCGGACGGCTTGCTCGCCTTCATGCAACCGGGCGGCCGCTCTCTCGT TCACGATGCGCTCGCGCCGCTCGGCGACAGCGGACTCGTGCTGGGGTTTGTTCTGCTCGTGCTTGCGGGCTACATCTTGA GCGAGGAGACCTGGGGCGCACCAGATCGCCCTGCACGCGTGTACTACCCACCGCTGTATCTGCAACTCGCTGAGGAGCGG AGGCAGCGTCGCGACGAAGCGCGGCGGCAACGCCTAAACGACGAAGAGGAATCTCTCCGAAAGAGGCGATCAGGTTAA
Upstream 100 bases:
>100_bases CGGGCATGCACGAGCGGTTCGTGGTCTGAGCAGCGTTCGATCAATGGCGGGGGAGAGGCGTTCTCTGCCGCGACGTACCC CTGAACAGGAGATTGCAGAG
Downstream 100 bases:
>100_bases CCTGTGGAGGGGCTGTGGCCCGCCATGGCCATGGCAGCGAGTTGAGTTGTACTGCGCTCTCCTGGGAACTGTCTACCTGC CGCGCCGACCGCGCTTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MAGEEKSKDSAKEGLPHLSLMEKAWDAQWVMRFVCIVLFIDGALVLKGGSGLLQWSTSTDKLWQDLGFLVVAAASFGLLV SFVLPTLGIFLCWIGYHSRRLARHVLEVEDRDDFGGAYGHVDAHRFHVYALEKESDFLLRMYENAWRREVQRREELDQIG NLVFATAFLAVADGLLAFMQPGGRSLVHDALAPLGDSGLVLGFVLLVLAGYILSEETWGAPDRPARVYYPPLYLQLAEER RQRRDEARRQRLNDEEESLRKRRSG
Sequences:
>Translated_265_residues MAGEEKSKDSAKEGLPHLSLMEKAWDAQWVMRFVCIVLFIDGALVLKGGSGLLQWSTSTDKLWQDLGFLVVAAASFGLLV SFVLPTLGIFLCWIGYHSRRLARHVLEVEDRDDFGGAYGHVDAHRFHVYALEKESDFLLRMYENAWRREVQRREELDQIG NLVFATAFLAVADGLLAFMQPGGRSLVHDALAPLGDSGLVLGFVLLVLAGYILSEETWGAPDRPARVYYPPLYLQLAEER RQRRDEARRQRLNDEEESLRKRRSG >Mature_264_residues AGEEKSKDSAKEGLPHLSLMEKAWDAQWVMRFVCIVLFIDGALVLKGGSGLLQWSTSTDKLWQDLGFLVVAAASFGLLVS FVLPTLGIFLCWIGYHSRRLARHVLEVEDRDDFGGAYGHVDAHRFHVYALEKESDFLLRMYENAWRREVQRREELDQIGN LVFATAFLAVADGLLAFMQPGGRSLVHDALAPLGDSGLVLGFVLLVLAGYILSEETWGAPDRPARVYYPPLYLQLAEERR QRRDEARRQRLNDEEESLRKRRSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30037; Mature: 29906
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEEKSKDSAKEGLPHLSLMEKAWDAQWVMRFVCIVLFIDGALVLKGGSGLLQWSTSTD CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEECCCHH KLWQDLGFLVVAAASFGLLVSFVLPTLGIFLCWIGYHSRRLARHVLEVEDRDDFGGAYGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VDAHRFHVYALEKESDFLLRMYENAWRREVQRREELDQIGNLVFATAFLAVADGLLAFMQ CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGGRSLVHDALAPLGDSGLVLGFVLLVLAGYILSEETWGAPDRPARVYYPPLYLQLAEER CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHH RQRRDEARRQRLNDEEESLRKRRSG HHHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure AGEEKSKDSAKEGLPHLSLMEKAWDAQWVMRFVCIVLFIDGALVLKGGSGLLQWSTSTD CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEECCCHH KLWQDLGFLVVAAASFGLLVSFVLPTLGIFLCWIGYHSRRLARHVLEVEDRDDFGGAYGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VDAHRFHVYALEKESDFLLRMYENAWRREVQRREELDQIGNLVFATAFLAVADGLLAFMQ CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGGRSLVHDALAPLGDSGLVLGFVLLVLAGYILSEETWGAPDRPARVYYPPLYLQLAEER CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHH RQRRDEARRQRLNDEEESLRKRRSG HHHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA