Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609236
Identifier: 120609236
GI number: 120609236
Start: 578158
End: 579669
Strand: Direct
Name: 120609236
Synonym: Aave_0535
Alternate gene names: NA
Gene position: 578158-579669 (Clockwise)
Preceding gene: 120609235
Following gene: 120609270
Centisome position: 10.8
GC content: 67.39
Gene sequence:
>1512_bases ATGGCAGCGGGGAAAGACATCGCCAGAGGCGCTCTGCTCAGCTTGGGCTACTGTGCCTCCTTCCTGCTGGCGTGGCGCTG TTCGATGGATCAGTGGTACCTGCCGGCGGGGCTGCGCGCCGCGACCTTGCTGTTCCTGCCGTATCGCCTCTGGCCCTATC TGCTCGCCGGTGATGCGGCCGCGCTGCTGGTGATCCGCGTGCCGATGGTCGAGCGCGGCGCGAGCCCGGTGTGGGCGTAC GCCAGTCCCTTCCTGCTGATGCCCTGTGTGGCGCTGGCCGTGCATGCCGCGCGGCGCCAGTTGCCGCGGCTGGTGGACCA GGAGTACCTGCTGCTGCCGCTGGCCTTGATGCTGGCGCTGTGGAGCACCTTGTGCAACATGGCATTGAATGCGCTGTTCA AGGGCTATACCGCACTGACGCCGCTGGAAGCGCTCACGCGTTACTGGCTGGGCGACTACCTGGGCATGCTGATGTTCACG CTCCCAGCCCTGCTATGGCTGCGCCGGGATGAGCCGATGACCGCCCGCCCGCGGCTGCCGAGGGATGGCCTGCTCGGGTC GGCAGCCGTGGTGGCGCTGTTCCTGATCTCCGGCATGGCGCAGGATCGCCTGTCGCACCAGGTGCTGATGTCCCTGATGG TCGTGCCGTCGGTGGTGCTCACGCTGCTGCACGGCTGGCGTGGGGCCGCTGTCGGCGTCGTGCTGGCCAACGTGGCGATC GGGATCATGCTGCCGGATGCCATGACGCTGGCGTCGTACCACGCCGAGGCATTCCGCGTGCAGATCGCGCTCGCGGCGGC GGCCACCGGCCTGTTCGTATTCGGGTCCCGGTTGTCGGCGGCCTTCGAGCATGCCAGCTATTTCCGCCACCAGCGTCAGG AGGCCTGGCAGATCGCGCAGGCGAGTTATCTGCAGGCGGAACGCACGCTGCGACGCCGGGTGGTCGAGTACAGCGACATC ACCGTCCACATCAACAAGCTGCGCACGGACATCGTCGCCCACCTCCGCTCGCGGGGACAACACGCCGCGGCCATGGAGAT GACGCGCACGGGCGTGATCCAGGCCCAGTTGCTCGACGAGTACGTCACCGCGCTGTACCCGCTCGGCATCGAGACGCATG GGCTGTACGCCATCCTGCGATCGGTCGCGATGAGCAATCTCTGCGATACCGAGTTCCAATGCCGCCTGCGTGGCGATCCC ATGCAGCTTTCTCTCGGGCTGCAGCTTGTCGCGTACCGATGCGCGCTCAACGTGATCGAAACACTGCCACCCGCGAAGCG CCATCTCATCAAGGGCAGGGTCTGGCGCGCGGGTGGTCGCCAGGGCATCGCGCTCTGCGTCGTCGCCGACGCGTCCCCGT TGGAACGAGGACGTACCGTGGCCCACGACGCGGACTGGGAGCTCGCGGCCAGGCTCAAAGTGCATGGCGGCACCTGTCGG CGCCGCCATGCGTACTGCCTCAGCTTTCTCGTCTCAGAGTCGGTGGGCGAAGGGCTCAGTCTGCGGCGCTGA
Upstream 100 bases:
>100_bases TGGCAGCGAGTTGAGTTGTACTGCGCTCTCCTGGGAACTGTCTACCTGCCGCGCCGACCGCGCTTGTACAGTGGCGCCCA CACGCCACGGACCGGTTGGA
Downstream 100 bases:
>100_bases TTTCCCAAGAATTGCCGCCGCTGCCGCCTGGCACCACGCGCACGACGAAGCCCGACGTCTGGTACACCACGGACCCGCTG GTGCCCGCACCCTTGGCCGG
Product: MASE1 domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MAAGKDIARGALLSLGYCASFLLAWRCSMDQWYLPAGLRAATLLFLPYRLWPYLLAGDAAALLVIRVPMVERGASPVWAY ASPFLLMPCVALAVHAARRQLPRLVDQEYLLLPLALMLALWSTLCNMALNALFKGYTALTPLEALTRYWLGDYLGMLMFT LPALLWLRRDEPMTARPRLPRDGLLGSAAVVALFLISGMAQDRLSHQVLMSLMVVPSVVLTLLHGWRGAAVGVVLANVAI GIMLPDAMTLASYHAEAFRVQIALAAAATGLFVFGSRLSAAFEHASYFRHQRQEAWQIAQASYLQAERTLRRRVVEYSDI TVHINKLRTDIVAHLRSRGQHAAAMEMTRTGVIQAQLLDEYVTALYPLGIETHGLYAILRSVAMSNLCDTEFQCRLRGDP MQLSLGLQLVAYRCALNVIETLPPAKRHLIKGRVWRAGGRQGIALCVVADASPLERGRTVAHDADWELAARLKVHGGTCR RRHAYCLSFLVSESVGEGLSLRR
Sequences:
>Translated_503_residues MAAGKDIARGALLSLGYCASFLLAWRCSMDQWYLPAGLRAATLLFLPYRLWPYLLAGDAAALLVIRVPMVERGASPVWAY ASPFLLMPCVALAVHAARRQLPRLVDQEYLLLPLALMLALWSTLCNMALNALFKGYTALTPLEALTRYWLGDYLGMLMFT LPALLWLRRDEPMTARPRLPRDGLLGSAAVVALFLISGMAQDRLSHQVLMSLMVVPSVVLTLLHGWRGAAVGVVLANVAI GIMLPDAMTLASYHAEAFRVQIALAAAATGLFVFGSRLSAAFEHASYFRHQRQEAWQIAQASYLQAERTLRRRVVEYSDI TVHINKLRTDIVAHLRSRGQHAAAMEMTRTGVIQAQLLDEYVTALYPLGIETHGLYAILRSVAMSNLCDTEFQCRLRGDP MQLSLGLQLVAYRCALNVIETLPPAKRHLIKGRVWRAGGRQGIALCVVADASPLERGRTVAHDADWELAARLKVHGGTCR RRHAYCLSFLVSESVGEGLSLRR >Mature_502_residues AAGKDIARGALLSLGYCASFLLAWRCSMDQWYLPAGLRAATLLFLPYRLWPYLLAGDAAALLVIRVPMVERGASPVWAYA SPFLLMPCVALAVHAARRQLPRLVDQEYLLLPLALMLALWSTLCNMALNALFKGYTALTPLEALTRYWLGDYLGMLMFTL PALLWLRRDEPMTARPRLPRDGLLGSAAVVALFLISGMAQDRLSHQVLMSLMVVPSVVLTLLHGWRGAAVGVVLANVAIG IMLPDAMTLASYHAEAFRVQIALAAAATGLFVFGSRLSAAFEHASYFRHQRQEAWQIAQASYLQAERTLRRRVVEYSDIT VHINKLRTDIVAHLRSRGQHAAAMEMTRTGVIQAQLLDEYVTALYPLGIETHGLYAILRSVAMSNLCDTEFQCRLRGDPM QLSLGLQLVAYRCALNVIETLPPAKRHLIKGRVWRAGGRQGIALCVVADASPLERGRTVAHDADWELAARLKVHGGTCRR RHAYCLSFLVSESVGEGLSLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55611; Mature: 55480
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGKDIARGALLSLGYCASFLLAWRCSMDQWYLPAGLRAATLLFLPYRLWPYLLAGDAA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHH ALLVIRVPMVERGASPVWAYASPFLLMPCVALAVHAARRQLPRLVDQEYLLLPLALMLAL EEHHEECCHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH WSTLCNMALNALFKGYTALTPLEALTRYWLGDYLGMLMFTLPALLWLRRDEPMTARPRLP HHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RDGLLGSAAVVALFLISGMAQDRLSHQVLMSLMVVPSVVLTLLHGWRGAAVGVVLANVAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GIMLPDAMTLASYHAEAFRVQIALAAAATGLFVFGSRLSAAFEHASYFRHQRQEAWQIAQ HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASYLQAERTLRRRVVEYSDITVHINKLRTDIVAHLRSRGQHAAAMEMTRTGVIQAQLLDE HHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YVTALYPLGIETHGLYAILRSVAMSNLCDTEFQCRLRGDPMQLSLGLQLVAYRCALNVIE HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHH TLPPAKRHLIKGRVWRAGGRQGIALCVVADASPLERGRTVAHDADWELAARLKVHGGTCR HCCHHHHHHHHCCCEECCCCCCEEEEEEECCCHHHCCCCCCCCCCCCEEEEEEECCCCHH RRHAYCLSFLVSESVGEGLSLRR HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AAGKDIARGALLSLGYCASFLLAWRCSMDQWYLPAGLRAATLLFLPYRLWPYLLAGDAA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHH ALLVIRVPMVERGASPVWAYASPFLLMPCVALAVHAARRQLPRLVDQEYLLLPLALMLAL EEHHEECCHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH WSTLCNMALNALFKGYTALTPLEALTRYWLGDYLGMLMFTLPALLWLRRDEPMTARPRLP HHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RDGLLGSAAVVALFLISGMAQDRLSHQVLMSLMVVPSVVLTLLHGWRGAAVGVVLANVAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GIMLPDAMTLASYHAEAFRVQIALAAAATGLFVFGSRLSAAFEHASYFRHQRQEAWQIAQ HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASYLQAERTLRRRVVEYSDITVHINKLRTDIVAHLRSRGQHAAAMEMTRTGVIQAQLLDE HHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YVTALYPLGIETHGLYAILRSVAMSNLCDTEFQCRLRGDPMQLSLGLQLVAYRCALNVIE HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHH TLPPAKRHLIKGRVWRAGGRQGIALCVVADASPLERGRTVAHDADWELAARLKVHGGTCR HCCHHHHHHHHCCCEECCCCCCEEEEEEECCCHHHCCCCCCCCCCCCEEEEEEECCCCHH RRHAYCLSFLVSESVGEGLSLRR HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA