Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609234
Identifier: 120609234
GI number: 120609234
Start: 576096
End: 577157
Strand: Direct
Name: 120609234
Synonym: Aave_0533
Alternate gene names: NA
Gene position: 576096-577157 (Clockwise)
Preceding gene: 120609225
Following gene: 120609235
Centisome position: 10.76
GC content: 66.48
Gene sequence:
>1062_bases ATGGAGTCCAGCAACCAGCCCATTCCGTACGCCGCGCGATGCGAGCGCCTTCCGCCATCCGGCACCACCGCCCTCGTGTG GCCGTTCGTCAACGTTGCGAAGGGTGAAGGACCGTACGAGCTGTTCCTCGACACCAACGCGCTCGCGCGCACGGAGTGGG CAGAACAGCTCCCGGCCGCGGATCGCGTGCGCTACTCGCTCAACCCGTGGCCGGCGTTGATGGAGCAGTGGATGTCCAAT CAGAAGCTCCGCGAGAGCCCCGACCCGGCCGCCTGGGTCAACGACAGGTTGGCACCCCTGGCATCGCGGGGGTTCCTGTT CCGCGCAAGGTTCGCGCAGCAGCAGGTCGCTCTGCTGCGAAAGAACGAATCAGCGCTGCGTACCCAGTTCAGCCTGATCT TCCCGTACGTCGCGCTCATGCGGTCGCTGCTGTCTCAGAAGGTGCCGCCGGAGGAAGCGCTCGCGAAGCTGGACGCCTTG ATGCAGGCCGACGTCCCACGCTTCACCGGCATGGCCATGCTGCTGGCCCTCAGCGTGCTGCTCAAGGGGCGACAGTCGCT GAAGCTCGATGGGGACCCGAAGCCCGCGTACTCGTATCTCGAATCGTTCCTGAGTTTTCAGCCCGGAAAGAAGGATGAGG CCGACCACATCACCCTGCCGTACCTGCGCAATCGCGCTGGCGACCTGAACCTGTGGCTGAGCGTCCCCATGCTGCGCCAG GCCGGCTACGAGTTCATCGGAACGCCCGCGCTGGTCACCGAAGACAAGGCCTTGCACCGCGTCATCCTGCGAACGCTGCC TCCGGTGCTCACCCCCAATCGAGCGATGGGCTTCGGTGTGGACAGCAATGGGCTCGACCCGGAGATCTGCCATCGCATCG TCATGGCCGTCGGCCCCATGGTGGTACGTGGCGCCGTGACGTCGCAGGAGAAGGAGGAGCGCCTGGGACGCCTGTTCGCG ATGGCGGGGGCGGCGTGCGCCAGGCCGGAGGAGACGGCTGCGCTCGACGAGGCGTGGCGGACATGGTGCCAGCCGGGCAT GCACGAGCGGTTCGTGGTCTGA
Upstream 100 bases:
>100_bases CTTGGTCGAGTCAGGCAACAATCGGCATCGCGGCGCGGCGCTTTGCCGGGCCGCCGGCGTTCACGCCGATAACAAATCGA AATGCAGGGAGAACTTGAGC
Downstream 100 bases:
>100_bases GCAGCGTTCGATCAATGGCGGGGGAGAGGCGTTCTCTGCCGCGACGTACCCCTGAACAGGAGATTGCAGAGATGGCAGGT GAAGAAAAATCGAAGGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MESSNQPIPYAARCERLPPSGTTALVWPFVNVAKGEGPYELFLDTNALARTEWAEQLPAADRVRYSLNPWPALMEQWMSN QKLRESPDPAAWVNDRLAPLASRGFLFRARFAQQQVALLRKNESALRTQFSLIFPYVALMRSLLSQKVPPEEALAKLDAL MQADVPRFTGMAMLLALSVLLKGRQSLKLDGDPKPAYSYLESFLSFQPGKKDEADHITLPYLRNRAGDLNLWLSVPMLRQ AGYEFIGTPALVTEDKALHRVILRTLPPVLTPNRAMGFGVDSNGLDPEICHRIVMAVGPMVVRGAVTSQEKEERLGRLFA MAGAACARPEETAALDEAWRTWCQPGMHERFVV
Sequences:
>Translated_353_residues MESSNQPIPYAARCERLPPSGTTALVWPFVNVAKGEGPYELFLDTNALARTEWAEQLPAADRVRYSLNPWPALMEQWMSN QKLRESPDPAAWVNDRLAPLASRGFLFRARFAQQQVALLRKNESALRTQFSLIFPYVALMRSLLSQKVPPEEALAKLDAL MQADVPRFTGMAMLLALSVLLKGRQSLKLDGDPKPAYSYLESFLSFQPGKKDEADHITLPYLRNRAGDLNLWLSVPMLRQ AGYEFIGTPALVTEDKALHRVILRTLPPVLTPNRAMGFGVDSNGLDPEICHRIVMAVGPMVVRGAVTSQEKEERLGRLFA MAGAACARPEETAALDEAWRTWCQPGMHERFVV >Mature_353_residues MESSNQPIPYAARCERLPPSGTTALVWPFVNVAKGEGPYELFLDTNALARTEWAEQLPAADRVRYSLNPWPALMEQWMSN QKLRESPDPAAWVNDRLAPLASRGFLFRARFAQQQVALLRKNESALRTQFSLIFPYVALMRSLLSQKVPPEEALAKLDAL MQADVPRFTGMAMLLALSVLLKGRQSLKLDGDPKPAYSYLESFLSFQPGKKDEADHITLPYLRNRAGDLNLWLSVPMLRQ AGYEFIGTPALVTEDKALHRVILRTLPPVLTPNRAMGFGVDSNGLDPEICHRIVMAVGPMVVRGAVTSQEKEERLGRLFA MAGAACARPEETAALDEAWRTWCQPGMHERFVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39459; Mature: 39459
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSNQPIPYAARCERLPPSGTTALVWPFVNVAKGEGPYELFLDTNALARTEWAEQLPAA CCCCCCCCCHHHHHCCCCCCCCEEEEECHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCH DRVRYSLNPWPALMEQWMSNQKLRESPDPAAWVNDRLAPLASRGFLFRARFAQQQVALLR HHHEECCCCCHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KNESALRTQFSLIFPYVALMRSLLSQKVPPEEALAKLDALMQADVPRFTGMAMLLALSVL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LKGRQSLKLDGDPKPAYSYLESFLSFQPGKKDEADHITLPYLRNRAGDLNLWLSVPMLRQ HCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECHHHHCCCCCEEEEEECHHHHH AGYEFIGTPALVTEDKALHRVILRTLPPVLTPNRAMGFGVDSNGLDPEICHRIVMAVGPM CCCHHCCCCCCEECHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHH VVRGAVTSQEKEERLGRLFAMAGAACARPEETAALDEAWRTWCQPGMHERFVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MESSNQPIPYAARCERLPPSGTTALVWPFVNVAKGEGPYELFLDTNALARTEWAEQLPAA CCCCCCCCCHHHHHCCCCCCCCEEEEECHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCH DRVRYSLNPWPALMEQWMSNQKLRESPDPAAWVNDRLAPLASRGFLFRARFAQQQVALLR HHHEECCCCCHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KNESALRTQFSLIFPYVALMRSLLSQKVPPEEALAKLDALMQADVPRFTGMAMLLALSVL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LKGRQSLKLDGDPKPAYSYLESFLSFQPGKKDEADHITLPYLRNRAGDLNLWLSVPMLRQ HCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECHHHHCCCCCEEEEEECHHHHH AGYEFIGTPALVTEDKALHRVILRTLPPVLTPNRAMGFGVDSNGLDPEICHRIVMAVGPM CCCHHCCCCCCEECHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHH VVRGAVTSQEKEERLGRLFAMAGAACARPEETAALDEAWRTWCQPGMHERFVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA