Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609115
Identifier: 120609115
GI number: 120609115
Start: 444871
End: 445359
Strand: Direct
Name: 120609115
Synonym: Aave_0412
Alternate gene names: NA
Gene position: 444871-445359 (Clockwise)
Preceding gene: 120609114
Following gene: 120609117
Centisome position: 8.31
GC content: 70.55
Gene sequence:
>489_bases ATGCGCCACCCCTTCGATGCAAAGGATCGCCGCGTGACCACCGAAGCCCTGCTGGCCTATGCCCATTTCCTGGCCATCCT GACCATGGCCGTCTTCCTCGCGAGCGAGGCCGCGCTCTGCCGCAAGGAGTGGATGAATGCCGCCGTCGTGGAGCGCCTCG CGCGCGTGGACCTGATCTACGGCCTCTCGGCCCTGGCCGTCCTGGCCACGGGCCTGGCCCGCGTGGCCTGGGGCATGAAG GGCGCGGGGTGGTACTGGTCGCAACCGCTGCTGCACGCCAAGGTCACCCTGTTCGTGGTGATCGGCCTGCTGTCCATCGC CCCCACGATGCGCTTCCTGCGCTGGCGCAAGGCCCTGCGCGCCACCGGCGCACTGCCCGACGACGCCGCCATCCGCAGCA CGCGCCGCCTCGTCATGATCGAAGCCCACCTGCTGGCCGTGATCCCGCTCCTCGCCGTCTTCCTCGCCCGGGGCGTCGGC GCCCGATAA
Upstream 100 bases:
>100_bases GGCTCCACGGGCACCAAGCCCGGCGACAGCGTGCGCGCCTACGCGCTGCCTGCGCAGAAGTAGGCCCGCGCCGGGGTGGC GCAGGGCGGGGCGCGCTACC
Downstream 100 bases:
>100_bases AAGAAATGCGCCCGGAGGCCATGATGGCTTCCGGGCGCGATCCAGGTGAGGCGGTCAGCGAACGGCCTAGCAGACGTTTG TGTATCCAATGCCGGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRHPFDAKDRRVTTEALLAYAHFLAILTMAVFLASEAALCRKEWMNAAVVERLARVDLIYGLSALAVLATGLARVAWGMK GAGWYWSQPLLHAKVTLFVVIGLLSIAPTMRFLRWRKALRATGALPDDAAIRSTRRLVMIEAHLLAVIPLLAVFLARGVG AR
Sequences:
>Translated_162_residues MRHPFDAKDRRVTTEALLAYAHFLAILTMAVFLASEAALCRKEWMNAAVVERLARVDLIYGLSALAVLATGLARVAWGMK GAGWYWSQPLLHAKVTLFVVIGLLSIAPTMRFLRWRKALRATGALPDDAAIRSTRRLVMIEAHLLAVIPLLAVFLARGVG AR >Mature_162_residues MRHPFDAKDRRVTTEALLAYAHFLAILTMAVFLASEAALCRKEWMNAAVVERLARVDLIYGLSALAVLATGLARVAWGMK GAGWYWSQPLLHAKVTLFVVIGLLSIAPTMRFLRWRKALRATGALPDDAAIRSTRRLVMIEAHLLAVIPLLAVFLARGVG AR
Specific function: Unknown
COG id: COG3556
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17862; Mature: 17862
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHPFDAKDRRVTTEALLAYAHFLAILTMAVFLASEAALCRKEWMNAAVVERLARVDLIY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSALAVLATGLARVAWGMKGAGWYWSQPLLHAKVTLFVVIGLLSIAPTMRFLRWRKALR HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGALPDDAAIRSTRRLVMIEAHLLAVIPLLAVFLARGVGAR HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRHPFDAKDRRVTTEALLAYAHFLAILTMAVFLASEAALCRKEWMNAAVVERLARVDLIY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSALAVLATGLARVAWGMKGAGWYWSQPLLHAKVTLFVVIGLLSIAPTMRFLRWRKALR HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGALPDDAAIRSTRRLVMIEAHLLAVIPLLAVFLARGVGAR HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA