| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608952
Identifier: 120608952
GI number: 120608952
Start: 278783
End: 279256
Strand: Direct
Name: 120608952
Synonym: Aave_0249
Alternate gene names: NA
Gene position: 278783-279256 (Clockwise)
Preceding gene: 120608951
Following gene: 120608956
Centisome position: 5.21
GC content: 69.62
Gene sequence:
>474_bases ATGGACGTCCTCGCCCCCGAAGAACTCTCCCTCCACCTTCTGCGGGAGGCCGACGAGCGGCACAAGCCGCTGAGCGACAT CGTGCTGGCCGGGCAGCGCATCGGCCGCACCGTGGAGGCCGCCGTGCTGGAGGCAGCGTTCCGCTGCGACAGCGGATACC TTCTGTTCACCACCGACGACGTCCCGGGCGAGGAGTTCCTCGGCATCCACCTGTTCAGCCCTGCCTTCGAGCGGCTGGAT ACCGCCACGCTCGGCGGGATGTATTCCACCGGCAGCTTCCTGCTGCTCGGCGTGGAAGGAACGGACACGGTGCGGTTCCG GTTCATCGGCGGCACCGATTGGCGGCTGAGGGTGCTGCCGAGGCCGCGCCTGCGCATGCCCCTGATGCCGGAGGCGCGCG GGGTTTCGAGGCCGCTGGGGTTCTCCCGGCGTTTCGAGATCACGGGGCGGCCCCAGCGCGAGCTGTCCGACTGA
Upstream 100 bases:
>100_bases CTGCGGCCCCGGTGCGCCGGTCTGCGTGGCGGTCGGGGCCTTCGTGGGCGGTGCGCTGTCTGCCTTCGGCGTGGACATGC TCTGGTGAGGCGCCCGGTCC
Downstream 100 bases:
>100_bases GCGCCTGGCCGGCGTGCTTCAGGGCGCGGGCCGGGCGAGTTCCGCCTCGATGTCGCCGGCGAGCGACGCGGGCTTGGCGG TGGGCGCGTAGCGGCGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDVLAPEELSLHLLREADERHKPLSDIVLAGQRIGRTVEAAVLEAAFRCDSGYLLFTTDDVPGEEFLGIHLFSPAFERLD TATLGGMYSTGSFLLLGVEGTDTVRFRFIGGTDWRLRVLPRPRLRMPLMPEARGVSRPLGFSRRFEITGRPQRELSD
Sequences:
>Translated_157_residues MDVLAPEELSLHLLREADERHKPLSDIVLAGQRIGRTVEAAVLEAAFRCDSGYLLFTTDDVPGEEFLGIHLFSPAFERLD TATLGGMYSTGSFLLLGVEGTDTVRFRFIGGTDWRLRVLPRPRLRMPLMPEARGVSRPLGFSRRFEITGRPQRELSD >Mature_157_residues MDVLAPEELSLHLLREADERHKPLSDIVLAGQRIGRTVEAAVLEAAFRCDSGYLLFTTDDVPGEEFLGIHLFSPAFERLD TATLGGMYSTGSFLLLGVEGTDTVRFRFIGGTDWRLRVLPRPRLRMPLMPEARGVSRPLGFSRRFEITGRPQRELSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17616; Mature: 17616
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLAPEELSLHLLREADERHKPLSDIVLAGQRIGRTVEAAVLEAAFRCDSGYLLFTTDD CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECC VPGEEFLGIHLFSPAFERLDTATLGGMYSTGSFLLLGVEGTDTVRFRFIGGTDWRLRVLP CCCCCEEEEEECCHHHHHHHHHHCCCEECCCCEEEEEECCCCEEEEEEECCCCEEEEECC RPRLRMPLMPEARGVSRPLGFSRRFEITGRPQRELSD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHCCCC >Mature Secondary Structure MDVLAPEELSLHLLREADERHKPLSDIVLAGQRIGRTVEAAVLEAAFRCDSGYLLFTTDD CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECC VPGEEFLGIHLFSPAFERLDTATLGGMYSTGSFLLLGVEGTDTVRFRFIGGTDWRLRVLP CCCCCEEEEEECCHHHHHHHHHHCCCEECCCCEEEEEECCCCEEEEEEECCCCEEEEECC RPRLRMPLMPEARGVSRPLGFSRRFEITGRPQRELSD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA