| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608951
Identifier: 120608951
GI number: 120608951
Start: 278036
End: 278770
Strand: Direct
Name: 120608951
Synonym: Aave_0248
Alternate gene names: NA
Gene position: 278036-278770 (Clockwise)
Preceding gene: 120608950
Following gene: 120608952
Centisome position: 5.19
GC content: 70.2
Gene sequence:
>735_bases ATGACCACCGACAACGACAATTCCGCGAAGGACCGCTCAGCGTTCGAGACATCCATCTGGATGCTCAAGGTGGAGATGGC CAATGCCGGCGCGCACATGACCATCGACGCCAATGCCCGGCTCACCTATACCCGCCAGATCGACGCCATGGCCAACGAGC TGCGCGCGCAGGCCCTGTCGGGGAACATCACCTGGGCTCAGGCCGCGCAGCAGGCGCAGGACACGCGCAACGTGATCATG GAAGTGATCCGTGGCCGCAGCACCCCGTTCGGGCGGGCCATGGCGCAGCAGCTCAAGGCCGAGGGCAAGACGCTCAATGA ACTCATCGCGCGCAAGGTGCAGCAGCTGCACGGCCCGGGGGCGCAGTTCGACCGGCTCACGGCGGCGCAGCAGAACGGCG TCTATGCGGAGATCGTGAAATCCGCCGGCAAATCCAATCCGCGCGTCACCCAGACGATGCGGGGGCTGTCGCGCGCGGGG CGGGGGCTGTCGCGCGCGGGGCGGGGGCTGATCGTGCTGTCGCTGGCGCTGTCGGTGTACAACGTGGCGACGGCGCAGGA CAAGGTGGCGGCGGCCGGCAGGGAGGTGGCCGTCACGGGCGCGGGGATCGGCGGCGGCATCGCGGGTGGCGCGCTCGCGG GCCTGGCCTGCGGCCCCGGTGCGCCGGTCTGCGTGGCGGTCGGGGCCTTCGTGGGCGGTGCGCTGTCTGCCTTCGGCGTG GACATGCTCTGGTGA
Upstream 100 bases:
>100_bases GGTCGTTGCGCAACCGTGCCGACCGGCGCTGGTACGGTTGGCACCAGTGCCATGGCCCCATTTTTCCGGAACCGGGCGCG CCAGACGGGCAGGAGGAGAC
Downstream 100 bases:
>100_bases GGCGCCCGGTCCATGGACGTCCTCGCCCCCGAAGAACTCTCCCTCCACCTTCTGCGGGAGGCCGACGAGCGGCACAAGCC GCTGAGCGACATCGTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTTDNDNSAKDRSAFETSIWMLKVEMANAGAHMTIDANARLTYTRQIDAMANELRAQALSGNITWAQAAQQAQDTRNVIM EVIRGRSTPFGRAMAQQLKAEGKTLNELIARKVQQLHGPGAQFDRLTAAQQNGVYAEIVKSAGKSNPRVTQTMRGLSRAG RGLSRAGRGLIVLSLALSVYNVATAQDKVAAAGREVAVTGAGIGGGIAGGALAGLACGPGAPVCVAVGAFVGGALSAFGV DMLW
Sequences:
>Translated_244_residues MTTDNDNSAKDRSAFETSIWMLKVEMANAGAHMTIDANARLTYTRQIDAMANELRAQALSGNITWAQAAQQAQDTRNVIM EVIRGRSTPFGRAMAQQLKAEGKTLNELIARKVQQLHGPGAQFDRLTAAQQNGVYAEIVKSAGKSNPRVTQTMRGLSRAG RGLSRAGRGLIVLSLALSVYNVATAQDKVAAAGREVAVTGAGIGGGIAGGALAGLACGPGAPVCVAVGAFVGGALSAFGV DMLW >Mature_243_residues TTDNDNSAKDRSAFETSIWMLKVEMANAGAHMTIDANARLTYTRQIDAMANELRAQALSGNITWAQAAQQAQDTRNVIME VIRGRSTPFGRAMAQQLKAEGKTLNELIARKVQQLHGPGAQFDRLTAAQQNGVYAEIVKSAGKSNPRVTQTMRGLSRAGR GLSRAGRGLIVLSLALSVYNVATAQDKVAAAGREVAVTGAGIGGGIAGGALAGLACGPGAPVCVAVGAFVGGALSAFGVD MLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25327; Mature: 25196
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDNDNSAKDRSAFETSIWMLKVEMANAGAHMTIDANARLTYTRQIDAMANELRAQALS CCCCCCCCCHHHHHHHHEEEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHC GNITWAQAAQQAQDTRNVIMEVIRGRSTPFGRAMAQQLKAEGKTLNELIARKVQQLHGPG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC AQFDRLTAAQQNGVYAEIVKSAGKSNPRVTQTMRGLSRAGRGLSRAGRGLIVLSLALSVY CHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH NVATAQDKVAAAGREVAVTGAGIGGGIAGGALAGLACGPGAPVCVAVGAFVGGALSAFGV HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DMLW HHCC >Mature Secondary Structure TTDNDNSAKDRSAFETSIWMLKVEMANAGAHMTIDANARLTYTRQIDAMANELRAQALS CCCCCCCCHHHHHHHHEEEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHC GNITWAQAAQQAQDTRNVIMEVIRGRSTPFGRAMAQQLKAEGKTLNELIARKVQQLHGPG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC AQFDRLTAAQQNGVYAEIVKSAGKSNPRVTQTMRGLSRAGRGLSRAGRGLIVLSLALSVY CHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH NVATAQDKVAAAGREVAVTGAGIGGGIAGGALAGLACGPGAPVCVAVGAFVGGALSAFGV HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DMLW HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA