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The map label for this gene is 120608841

Identifier: 120608841

GI number: 120608841

Start: 143978

End: 144553

Strand: Direct

Name: 120608841

Synonym: Aave_0133

Alternate gene names: NA

Gene position: 143978-144553 (Clockwise)

Preceding gene: 120608840

Following gene: 120608845

Centisome position: 2.69

GC content: 68.4

Gene sequence:

>576_bases
ATGCACGAGGCCCGCGCCCAGGCCATCGTCGCCGCAGCAGGCCGGTTGCTGGGCGAAAAGGGCTTCGAGGCCATGACGCT
CGACGAAGTCGCCGCCGAGGTGGGCGTGGCCAAGGCCAGCCTCTACAAGCATTTCGCCGGCAAGGAAGACCTCTGCGCCA
CGGCCATGGCGCGCGCCGTCGAGCGCCTGCGCGAGTTCCTCGAAGGGCTGCCCCAAGGCCTTCCGCCGCTCGATTGCCTC
GAGCGGCTGCTGCGCTGGCTGCTGTCGCTGCAGCTCACCGACGAGCTGCCCCTGCTGCTCAGTCGCAACTCGGGCCTGCA
GCGGCCACTCAAGGAATGCGCGGCCTACCAGAGCGCCCTGCAATGCGTGAGCGCGCGCGTCATGGAGTGGATCACCGCCG
CGCAGGGCGAAGGCCTGCTGAGCCGGATGCTGCCGGCCGAGGTGATTCTCTACTCCATCTATGCCCGCAGTGCCGACCCG
CTGCTGTCCATGCTGCGCGACCAGGGCGGCCACACCGATGAGCAGATCGTGGACTGGGCGGTGCAGACCTGCTTCGATGG
CTTGAAGTCCAGGTAG

Upstream 100 bases:

>100_bases
CCATCAGCTCGACCGTGAGCGACGGCGTTCTGGGCGCAGGCCCTAAGATGGCTGCATGAATACGCCTTCCCCGCTACCCC
GCCGCTCCTTCAGGGCACAG

Downstream 100 bases:

>100_bases
GCATTCGTTCCCACGGATCGATGGTCACCCCGTGGGTTGGAAGTCCGCCGCGTTGCGCGTGCCCACCGCCATGGTCAGGA
GCCCCTCCTGCCGGTCCGTA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator TetR Family; Transcriptional Regulator TetR Family; TetR Family Transcription Regulator Protein; Regulatory Protein TetR; Transcriptional Regulator Tetr Family

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MHEARAQAIVAAAGRLLGEKGFEAMTLDEVAAEVGVAKASLYKHFAGKEDLCATAMARAVERLREFLEGLPQGLPPLDCL
ERLLRWLLSLQLTDELPLLLSRNSGLQRPLKECAAYQSALQCVSARVMEWITAAQGEGLLSRMLPAEVILYSIYARSADP
LLSMLRDQGGHTDEQIVDWAVQTCFDGLKSR

Sequences:

>Translated_191_residues
MHEARAQAIVAAAGRLLGEKGFEAMTLDEVAAEVGVAKASLYKHFAGKEDLCATAMARAVERLREFLEGLPQGLPPLDCL
ERLLRWLLSLQLTDELPLLLSRNSGLQRPLKECAAYQSALQCVSARVMEWITAAQGEGLLSRMLPAEVILYSIYARSADP
LLSMLRDQGGHTDEQIVDWAVQTCFDGLKSR
>Mature_191_residues
MHEARAQAIVAAAGRLLGEKGFEAMTLDEVAAEVGVAKASLYKHFAGKEDLCATAMARAVERLREFLEGLPQGLPPLDCL
ERLLRWLLSLQLTDELPLLLSRNSGLQRPLKECAAYQSALQCVSARVMEWITAAQGEGLLSRMLPAEVILYSIYARSADP
LLSMLRDQGGHTDEQIVDWAVQTCFDGLKSR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20998; Mature: 20998

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEARAQAIVAAAGRLLGEKGFEAMTLDEVAAEVGVAKASLYKHFAGKEDLCATAMARAV
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ERLREFLEGLPQGLPPLDCLERLLRWLLSLQLTDELPLLLSRNSGLQRPLKECAAYQSAL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHH
QCVSARVMEWITAAQGEGLLSRMLPAEVILYSIYARSADPLLSMLRDQGGHTDEQIVDWA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH
VQTCFDGLKSR
HHHHHHHHCCC
>Mature Secondary Structure
MHEARAQAIVAAAGRLLGEKGFEAMTLDEVAAEVGVAKASLYKHFAGKEDLCATAMARAV
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ERLREFLEGLPQGLPPLDCLERLLRWLLSLQLTDELPLLLSRNSGLQRPLKECAAYQSAL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHH
QCVSARVMEWITAAQGEGLLSRMLPAEVILYSIYARSADPLLSMLRDQGGHTDEQIVDWA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH
VQTCFDGLKSR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA