| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608845
Identifier: 120608845
GI number: 120608845
Start: 147188
End: 147619
Strand: Direct
Name: 120608845
Synonym: Aave_0137
Alternate gene names: NA
Gene position: 147188-147619 (Clockwise)
Preceding gene: 120608841
Following gene: 120608854
Centisome position: 2.75
GC content: 67.36
Gene sequence:
>432_bases ATGACGAACTTTGTACACATCGAATACCGTACCGAACATCCCGGCGTGGCACGTGCCGAACAGGCCGCCGCCACCCTGAA GAGCGCCTTCGAAGGCGCACGCGGCGCCTCCTCGCTGCTCCTGGCCGCCGTCGTGGCTGCCGTGCTGGTGGTGGCCAACC AGTTCATCGACACATGGGGCGAAGGCCACACCCTCGCTGCATGGATGGTGCTCTGGCTGATCGCCTTCGCCGCCCTGGCC CTGCTGGCCGGCCCCGTCCGCCGCGCTGCCGCCATGCTGCGCGCCGGCTTCCATGCCTGGAAGGAGGCCCGCCGCCGTGA AGCCGAAGACGAAAAGACCTGGAACGCCGCCCTGCACGATGCCCGCATCATGGCCGATCTGAGCCGCGCCATGAACGGTA TCGCCGTGGACAACATCCGCCGCTACTACTGA
Upstream 100 bases:
>100_bases CTGGGATTCAAAATATAAAGTGGAACAGCTATGGGGTAAACCCTAAGATACCTGCATTCGCCCGGCAACTTCGCCACAAG CGTTTGAAAGGGTCTGCATC
Downstream 100 bases:
>100_bases TCCGGACCGGGCCTGGCGCCCGGCCAGATCGCCGGGGTCTTGCCCTGGCACCTTCTTCGAGGGCACCGCGAGGTGCCCTT TTTTCGTGGGCGAACGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTNFVHIEYRTEHPGVARAEQAAATLKSAFEGARGASSLLLAAVVAAVLVVANQFIDTWGEGHTLAAWMVLWLIAFAALA LLAGPVRRAAAMLRAGFHAWKEARRREAEDEKTWNAALHDARIMADLSRAMNGIAVDNIRRYY
Sequences:
>Translated_143_residues MTNFVHIEYRTEHPGVARAEQAAATLKSAFEGARGASSLLLAAVVAAVLVVANQFIDTWGEGHTLAAWMVLWLIAFAALA LLAGPVRRAAAMLRAGFHAWKEARRREAEDEKTWNAALHDARIMADLSRAMNGIAVDNIRRYY >Mature_142_residues TNFVHIEYRTEHPGVARAEQAAATLKSAFEGARGASSLLLAAVVAAVLVVANQFIDTWGEGHTLAAWMVLWLIAFAALAL LAGPVRRAAAMLRAGFHAWKEARRREAEDEKTWNAALHDARIMADLSRAMNGIAVDNIRRYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15701; Mature: 15570
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFVHIEYRTEHPGVARAEQAAATLKSAFEGARGASSLLLAAVVAAVLVVANQFIDTWG CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EGHTLAAWMVLWLIAFAALALLAGPVRRAAAMLRAGFHAWKEARRREAEDEKTWNAALHD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ARIMADLSRAMNGIAVDNIRRYY HHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure TNFVHIEYRTEHPGVARAEQAAATLKSAFEGARGASSLLLAAVVAAVLVVANQFIDTWG CCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EGHTLAAWMVLWLIAFAALALLAGPVRRAAAMLRAGFHAWKEARRREAEDEKTWNAALHD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ARIMADLSRAMNGIAVDNIRRYY HHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA