Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is flgI [H]
Identifier: 119947173
GI number: 119947173
Start: 4389133
End: 4390239
Strand: Reverse
Name: flgI [H]
Synonym: Ping_3571
Alternate gene names: 119947173
Gene position: 4390239-4389133 (Counterclockwise)
Preceding gene: 119947174
Following gene: 119947172
Centisome position: 96.29
GC content: 44.44
Gene sequence:
>1107_bases ATGTCTAAAATGTTAAGAAGTTTTTGTTATCTTGGCTTGGTTTTCCTTATCAATTCGAGTGTTGCCGATGATTTGATGAA TCTGGTTGATATTAAGGGTATCCGCACAAATGAGCTTGCCGGTTACGGTCTAGTCGTTGGTTTAGATGGTACCGGCGATA AAAGCCAGGTTAAATTTACCAGTCAATCTGTGACTAATATGATCAAAAAGTTTGGTGTGCAGCTTAACCCTGGCGTTAAC CCTAAATTGAAAAATGTTGCGGCAGTATCGGTTACTGCAACGGTGACCGCCATGTTAGGTGAAGGGCAAAAAATAAATGT AGTGGTATCGAGTTTAGGGGATGCTAAAAGTTTACGCGGTGGAACCTTAATTTTAACGCCGCTGCACGGAATGGATGGTG AAATCTATGCGATTGCGCAGGGTAGCGTGATTGTTGGCGGTCTCGGTGTTCAGGGTGCCGACGGCAGCAGTGTGACGATT AATCTACCTACCACCGGGCGTATCCCTAACGGTGCAATTTTGGAACGTGAGATTTTGAATACCTTTAATGAGAGCTCGCA TATCACCCTTAATTTGCAGAAACCGAATTTCACTACGGCAAAAAATATTGCCCGCAGTATCAATATGATTTTTGGACCTG GCGTTGCTGAGGCGATGAGTTTTGCAAGTGTGCAAGTCGCTGCGCCGATGGATAAGGGCCAGCGTGTGACATTTATGTCG ATGCTTGAAGAAATTGATGTCGATCAAGGCAAAGGCAAAGCGCGCGTTATCTTTAACTCTCGCACCGGTACCGTGGTTAT TAGCGAGTCGGTAAAAATATCGCGGGTGGCCGTGTCTCATGGTGGTCTTACTATCAGTATTCAGGAAGATGCCTTTGTCA GTCAACCCGCTGCATTATCGGAGGGAGGCAATACCGAGGTCATTAAAAATTCAAAAATTGTTATAGAGCAGGATAATCCC CAGATGATGGTTTGGCGCGAGGGGGTTGATTTACAGACTATTGTTAATGCAATTAACAGCGTTGGGGGATCACCCGATGA TGTTATGCAGATATTACAAGCATTAGATGAAGCAGGCGCATTAAATGCAGAATTACTCGTTATATAG
Upstream 100 bases:
>100_bases ATTACCTATTCAGGAAAAGGCGCCTTGGCAGACAGCAATGCAGCCGGCTGGTTAATGCAGTTTTTTACCTCCCCCTGGAT GCCATTTTAAAGGAGTCATA
Downstream 100 bases:
>100_bases GGAATAAATTTATGTTTCAGGTAGTGGGCAGTTCAACAGTGTCACTCTATAACGACACGAAAATGATTAACAATATTAAA TATCAAAGTGATCCGGAGGC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein 1 [H]
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSKMLRSFCYLGLVFLINSSVADDLMNLVDIKGIRTNELAGYGLVVGLDGTGDKSQVKFTSQSVTNMIKKFGVQLNPGVN PKLKNVAAVSVTATVTAMLGEGQKINVVVSSLGDAKSLRGGTLILTPLHGMDGEIYAIAQGSVIVGGLGVQGADGSSVTI NLPTTGRIPNGAILEREILNTFNESSHITLNLQKPNFTTAKNIARSINMIFGPGVAEAMSFASVQVAAPMDKGQRVTFMS MLEEIDVDQGKGKARVIFNSRTGTVVISESVKISRVAVSHGGLTISIQEDAFVSQPAALSEGGNTEVIKNSKIVIEQDNP QMMVWREGVDLQTIVNAINSVGGSPDDVMQILQALDEAGALNAELLVI
Sequences:
>Translated_368_residues MSKMLRSFCYLGLVFLINSSVADDLMNLVDIKGIRTNELAGYGLVVGLDGTGDKSQVKFTSQSVTNMIKKFGVQLNPGVN PKLKNVAAVSVTATVTAMLGEGQKINVVVSSLGDAKSLRGGTLILTPLHGMDGEIYAIAQGSVIVGGLGVQGADGSSVTI NLPTTGRIPNGAILEREILNTFNESSHITLNLQKPNFTTAKNIARSINMIFGPGVAEAMSFASVQVAAPMDKGQRVTFMS MLEEIDVDQGKGKARVIFNSRTGTVVISESVKISRVAVSHGGLTISIQEDAFVSQPAALSEGGNTEVIKNSKIVIEQDNP QMMVWREGVDLQTIVNAINSVGGSPDDVMQILQALDEAGALNAELLVI >Mature_367_residues SKMLRSFCYLGLVFLINSSVADDLMNLVDIKGIRTNELAGYGLVVGLDGTGDKSQVKFTSQSVTNMIKKFGVQLNPGVNP KLKNVAAVSVTATVTAMLGEGQKINVVVSSLGDAKSLRGGTLILTPLHGMDGEIYAIAQGSVIVGGLGVQGADGSSVTIN LPTTGRIPNGAILEREILNTFNESSHITLNLQKPNFTTAKNIARSINMIFGPGVAEAMSFASVQVAAPMDKGQRVTFMSM LEEIDVDQGKGKARVIFNSRTGTVVISESVKISRVAVSHGGLTISIQEDAFVSQPAALSEGGNTEVIKNSKIVIEQDNPQ MMVWREGVDLQTIVNAINSVGGSPDDVMQILQALDEAGALNAELLVI
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=366, Percent_Identity=39.344262295082, Blast_Score=248, Evalue=4e-67,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 38775; Mature: 38644
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKMLRSFCYLGLVFLINSSVADDLMNLVDIKGIRTNELAGYGLVVGLDGTGDKSQVKFT CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEC SQSVTNMIKKFGVQLNPGVNPKLKNVAAVSVTATVTAMLGEGQKINVVVSSLGDAKSLRG HHHHHHHHHHCCCEECCCCCCCCCCEEEEEEHEEEEEHHCCCCEEEEEEECCCCHHHCCC GTLILTPLHGMDGEIYAIAQGSVIVGGLGVQGADGSSVTINLPTTGRIPNGAILEREILN CEEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHH TFNESSHITLNLQKPNFTTAKNIARSINMIFGPGVAEAMSFASVQVAAPMDKGQRVTFMS HCCCCCEEEEEEECCCCCHHHHHHHHHHEEECCCHHHHHHHHEEEEECCCCCCCEEHHHH MLEEIDVDQGKGKARVIFNSRTGTVVISESVKISRVAVSHGGLTISIQEDAFVSQPAALS HHHHCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCHHC EGGNTEVIKNSKIVIEQDNPQMMVWREGVDLQTIVNAINSVGGSPDDVMQILQALDEAGA CCCCEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC LNAELLVI CCEEEEEC >Mature Secondary Structure SKMLRSFCYLGLVFLINSSVADDLMNLVDIKGIRTNELAGYGLVVGLDGTGDKSQVKFT HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEC SQSVTNMIKKFGVQLNPGVNPKLKNVAAVSVTATVTAMLGEGQKINVVVSSLGDAKSLRG HHHHHHHHHHCCCEECCCCCCCCCCEEEEEEHEEEEEHHCCCCEEEEEEECCCCHHHCCC GTLILTPLHGMDGEIYAIAQGSVIVGGLGVQGADGSSVTINLPTTGRIPNGAILEREILN CEEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHH TFNESSHITLNLQKPNFTTAKNIARSINMIFGPGVAEAMSFASVQVAAPMDKGQRVTFMS HCCCCCEEEEEEECCCCCHHHHHHHHHHEEECCCHHHHHHHHEEEEECCCCCCCEEHHHH MLEEIDVDQGKGKARVIFNSRTGTVVISESVKISRVAVSHGGLTISIQEDAFVSQPAALS HHHHCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCHHC EGGNTEVIKNSKIVIEQDNPQMMVWREGVDLQTIVNAINSVGGSPDDVMQILQALDEAGA CCCCEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC LNAELLVI CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]