Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is flgJ [C]
Identifier: 119947172
GI number: 119947172
Start: 4388738
End: 4389121
Strand: Reverse
Name: flgJ [C]
Synonym: Ping_3570
Alternate gene names: 119947172
Gene position: 4389121-4388738 (Counterclockwise)
Preceding gene: 119947173
Following gene: 119947171
Centisome position: 96.26
GC content: 40.1
Gene sequence:
>384_bases ATGTTTCAGGTAGTGGGCAGTTCAACAGTGTCACTCTATAACGACACGAAAATGATTAACAATATTAAATATCAAAGTGA TCCGGAGGCCGCATTAAAAATGGCTGCTAAACAATTTGAAGGCATGCTCTATCAACAGATTCTTAAAAATATGCGGGCAG CTACAGATTTAATCAATAATGAAGACAGTCCATTATCTTCTAAAAGTGGCAGTATCATGCGTGATATGCACGACGGTCAG TTGGCGATGCAGATGGCACAGGGTGGTCCGGGGTCAATATCTGAAATGCTGGTGAAACAGTTATCCAGTGCCGGCACCAC AGCAGTTAACCATTTTGCACTTAACAATGAGATTGCTTTTAACCAGTTGAATAATAAAGATTAA
Upstream 100 bases:
>100_bases GCGTTGGGGGATCACCCGATGATGTTATGCAGATATTACAAGCATTAGATGAAGCAGGCGCATTAAATGCAGAATTACTC GTTATATAGGGAATAAATTT
Downstream 100 bases:
>100_bases GAGCGCAGGGGATAGTCATGAGTATATATAATATTGCCCTATCAGGGGTAAGCGCAAACCGTACAGCTTTAAATATAACG GCTCAAAATATAGCAAATGC
Product: putative flagellar protein FlgJ
Products: NA
Alternate protein names: Peptidoglycan Hydrolase; Flagellar Protein; Flagellar Biosynthesis
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MFQVVGSSTVSLYNDTKMINNIKYQSDPEAALKMAAKQFEGMLYQQILKNMRAATDLINNEDSPLSSKSGSIMRDMHDGQ LAMQMAQGGPGSISEMLVKQLSSAGTTAVNHFALNNEIAFNQLNNKD
Sequences:
>Translated_127_residues MFQVVGSSTVSLYNDTKMINNIKYQSDPEAALKMAAKQFEGMLYQQILKNMRAATDLINNEDSPLSSKSGSIMRDMHDGQ LAMQMAQGGPGSISEMLVKQLSSAGTTAVNHFALNNEIAFNQLNNKD >Mature_127_residues MFQVVGSSTVSLYNDTKMINNIKYQSDPEAALKMAAKQFEGMLYQQILKNMRAATDLINNEDSPLSSKSGSIMRDMHDGQ LAMQMAQGGPGSISEMLVKQLSSAGTTAVNHFALNNEIAFNQLNNKD
Specific function: Flagellum-Specific Muramidase Which Hydrolyzes The Peptidoglycan Layer To Assemble The Rod Structure In The Periplasmic Space (By Similarity). [C]
COG id: COG3951
COG function: function code MNO; Rod binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.-
Molecular weight: Translated: 13893; Mature: 13893
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.9 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQVVGSSTVSLYNDTKMINNIKYQSDPEAALKMAAKQFEGMLYQQILKNMRAATDLINN CEEECCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDSPLSSKSGSIMRDMHDGQLAMQMAQGGPGSISEMLVKQLSSAGTTAVNHFALNNEIAF CCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEE NQLNNKD CCCCCCC >Mature Secondary Structure MFQVVGSSTVSLYNDTKMINNIKYQSDPEAALKMAAKQFEGMLYQQILKNMRAATDLINN CEEECCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDSPLSSKSGSIMRDMHDGQLAMQMAQGGPGSISEMLVKQLSSAGTTAVNHFALNNEIAF CCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEE NQLNNKD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA