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The map label for this gene is flgH [H]

Identifier: 119947174

GI number: 119947174

Start: 4390250

End: 4390948

Strand: Reverse

Name: flgH [H]

Synonym: Ping_3572

Alternate gene names: 119947174

Gene position: 4390948-4390250 (Counterclockwise)

Preceding gene: 119947175

Following gene: 119947173

Centisome position: 96.3

GC content: 43.78

Gene sequence:

>699_bases
ATGGCCAGACATGAGGCAGGTCCTACCATCTATTATAAATCAGCATTTTTGCTTTTATTATCTTTATTCATAAGCGCTTG
CACAGTACGCTCTGAATTTGTTCCACCTGCTCCAAATGACGCCGCGTTTGCGCCACCATTGCTGGATTATTCCCAGCCTA
AAACCAGAAATGGTAGTTTATTCAAGCCTACCCAGTCTTTCTCACTTTTTACCGATATACGCGCCTATGACGTTGGCGAT
ATTCTAATGGTATACCTCAACGAAGAAACCTCATCAAAGAAAGCAGCCGGTACAGAATTTGGAAAAAGCAGCAGTGCTGA
AATCAGCGCACCAACTTTTGGCAGCAGCGTACTAGACAATTATTCTGCAAGTGTTGCGGGTGAGCGTGACTTTAGTGGTT
CAGCCTCGAGCTCACAAGGTAATAAATTAAGTGGCTCAATCACAGTAACGGTTTATGAGGTTTTGCCCAATGGAGTATTA
CATATTCGTGGCGAAAAATGGATCACCTTAAATCAGGGCGATGAATTTATTCGTTTGACTGGCAATGTCAGGGTTGAAGA
TATTAACAGTGATAACGCTATTGGCTCACAGCGTATTGCCGATGCAAGAATTACCTATTCAGGAAAAGGCGCCTTGGCAG
ACAGCAATGCAGCCGGCTGGTTAATGCAGTTTTTTACCTCCCCCTGGATGCCATTTTAA

Upstream 100 bases:

>100_bases
AAATGGTTGATATGATTTCAACTCAACGTGCTTATGAAATGAGCGCGAAAATGGTTTCTGCCGCAGATGAAATGTTAAAA
TACATAGCGCAAGCAACCTA

Downstream 100 bases:

>100_bases
AGGAGTCATAATGTCTAAAATGTTAAGAAGTTTTTGTTATCTTGGCTTGGTTTTCCTTATCAATTCGAGTGTTGCCGATG
ATTTGATGAATCTGGTTGAT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein 2 [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MARHEAGPTIYYKSAFLLLLSLFISACTVRSEFVPPAPNDAAFAPPLLDYSQPKTRNGSLFKPTQSFSLFTDIRAYDVGD
ILMVYLNEETSSKKAAGTEFGKSSSAEISAPTFGSSVLDNYSASVAGERDFSGSASSSQGNKLSGSITVTVYEVLPNGVL
HIRGEKWITLNQGDEFIRLTGNVRVEDINSDNAIGSQRIADARITYSGKGALADSNAAGWLMQFFTSPWMPF

Sequences:

>Translated_232_residues
MARHEAGPTIYYKSAFLLLLSLFISACTVRSEFVPPAPNDAAFAPPLLDYSQPKTRNGSLFKPTQSFSLFTDIRAYDVGD
ILMVYLNEETSSKKAAGTEFGKSSSAEISAPTFGSSVLDNYSASVAGERDFSGSASSSQGNKLSGSITVTVYEVLPNGVL
HIRGEKWITLNQGDEFIRLTGNVRVEDINSDNAIGSQRIADARITYSGKGALADSNAAGWLMQFFTSPWMPF
>Mature_231_residues
ARHEAGPTIYYKSAFLLLLSLFISACTVRSEFVPPAPNDAAFAPPLLDYSQPKTRNGSLFKPTQSFSLFTDIRAYDVGDI
LMVYLNEETSSKKAAGTEFGKSSSAEISAPTFGSSVLDNYSASVAGERDFSGSASSSQGNKLSGSITVTVYEVLPNGVLH
IRGEKWITLNQGDEFIRLTGNVRVEDINSDNAIGSQRIADARITYSGKGALADSNAAGWLMQFFTSPWMPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=226, Percent_Identity=34.9557522123894, Blast_Score=110, Evalue=6e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 25051; Mature: 24920

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARHEAGPTIYYKSAFLLLLSLFISACTVRSEFVPPAPNDAAFAPPLLDYSQPKTRNGSL
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
FKPTQSFSLFTDIRAYDVGDILMVYLNEETSSKKAAGTEFGKSSSAEISAPTFGSSVLDN
ECCCCCCEEEHHHEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHC
YSASVAGERDFSGSASSSQGNKLSGSITVTVYEVLPNGVLHIRGEKWITLNQGDEFIRLT
CCCCCCCCCCCCCCCCCCCCCEECCEEEEEEEEECCCCEEEECCCEEEEECCCCCEEEEE
GNVRVEDINSDNAIGSQRIADARITYSGKGALADSNAAGWLMQFFTSPWMPF
CCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARHEAGPTIYYKSAFLLLLSLFISACTVRSEFVPPAPNDAAFAPPLLDYSQPKTRNGSL
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
FKPTQSFSLFTDIRAYDVGDILMVYLNEETSSKKAAGTEFGKSSSAEISAPTFGSSVLDN
ECCCCCCEEEHHHEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHC
YSASVAGERDFSGSASSSQGNKLSGSITVTVYEVLPNGVLHIRGEKWITLNQGDEFIRLT
CCCCCCCCCCCCCCCCCCCCCEECCEEEEEEEEECCCCEEEECCCEEEEECCCCCEEEEE
GNVRVEDINSDNAIGSQRIADARITYSGKGALADSNAAGWLMQFFTSPWMPF
CCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]