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The map label for this gene is oadB [H]

Identifier: 119946980

GI number: 119946980

Start: 4167786

End: 4168916

Strand: Reverse

Name: oadB [H]

Synonym: Ping_3375

Alternate gene names: 119946980

Gene position: 4168916-4167786 (Counterclockwise)

Preceding gene: 119946981

Following gene: 119946979

Centisome position: 91.43

GC content: 43.5

Gene sequence:

>1131_bases
GTGGATGGATTAATAACACTTTGGGCAGATACGGGTATAGCACATTTTACCTTTCCTGATCTGGTCATGATTGCTGTAGG
TCTCTTATTATTATACCTCGCAATAGTACGTAAATTTGAGCCGTTGTTGCTATTACCAATTGGTTTTGGCGCAATTTTAG
CAAACATACCTAATGCTGGTTTTACCGAACCGGGCGGCATACTTTATTACATCTACCATGTGGGTATTGAAACGGGGGTT
TTCCCGTTAATTATCTTTATGGGGGTTGGGGCACTGACGGATTTTGGTGCTTTAATTGCGAATCCTAAAACATTGTTTTT
AGGAGCTGCTGCTCAGTTTGGTATTTTTACTACATTATTTGGTGCTATTTTACTTAATTTAGTGCCTGGTTTTGAATTTA
GCCTGCAGGATGCTTCTGCTATTGCCATTATTGGTGGCGCCGATGGTCCGACTGCGATTTTCTTAGCATCTAAGCTTGCG
CCTGACTTGCTTGGACCTATTGCTGTTGCGGCTTATTCATATATGGCACTGGTACCCTTGATCCAGCCACCCATTATGCG
CGCTTTAACGACTCAAGCTGAGCGTGAAATTAAGATGGAACAGTTACGTCCTGTCAGTAAAAGAGAAAAAATTATTTTCC
CTCTGGCAGTATTGTTAATGACTATCTTATTTTTACCGGCGGCAACACCGCTTGTTGGGATGTTCTGCTTAGGTAACCTG
ATGCGTGAGTCAGGCGTTGTTGAGCGTTTAAGCAACACCGCACAAAATGAGCTTATTAATATAGTGACTATCTTTTTAGG
CTTGGGCGTAGGTTCAAAGTTATCGGCAGATAAGTTCTTAAATCTGGAAACCTTAGGTATTTTAGGATTGGGCGCGATTG
CCTTTTCTATCGGCACCGCATCGGGTGTGCTAATGGCAAAACTGATGGGCAAATTTTCCAAAGATAAAATAAACCCATTA
ATCGGTGCGGCAGGGGTTTCAGCTGTTCCAATGGCTGCACGAGTTGCAAATAAGGTTGGTTTAGAGGCAAACCCTCATAA
CTTCCTGTTAATGCATGCGATGGGCCCCAATGTTGCGGGCGTACTTGGTAGTGCCGTTGCCGCGGGTGTGCTTTTAGCAA
TCGTAGGGTAA

Upstream 100 bases:

>100_bases
CGAGCACCAAAATCGGGGGTTATCCAAGGCGTTTTTGTCAAAGAAGGTTCTTCTGTTGCCGTGGGTGAAACCCTGTTTAA
AATAGCTTAAGGAAGATAAC

Downstream 100 bases:

>100_bases
CTTACTGCTTCTATTAAGTTTTTTATAAAGGCCACTTTATTAAGTGGTCTTTTTTATGGGTAAAGGAGTTTCATTTGTGG
TCTGAATTAATTGTTTTGTT

Product: oxaloacetate decarboxylase, beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDGLITLWADTGIAHFTFPDLVMIAVGLLLLYLAIVRKFEPLLLLPIGFGAILANIPNAGFTEPGGILYYIYHVGIETGV
FPLIIFMGVGALTDFGALIANPKTLFLGAAAQFGIFTTLFGAILLNLVPGFEFSLQDASAIAIIGGADGPTAIFLASKLA
PDLLGPIAVAAYSYMALVPLIQPPIMRALTTQAEREIKMEQLRPVSKREKIIFPLAVLLMTILFLPAATPLVGMFCLGNL
MRESGVVERLSNTAQNELINIVTIFLGLGVGSKLSADKFLNLETLGILGLGAIAFSIGTASGVLMAKLMGKFSKDKINPL
IGAAGVSAVPMAARVANKVGLEANPHNFLLMHAMGPNVAGVLGSAVAAGVLLAIVG

Sequences:

>Translated_376_residues
MDGLITLWADTGIAHFTFPDLVMIAVGLLLLYLAIVRKFEPLLLLPIGFGAILANIPNAGFTEPGGILYYIYHVGIETGV
FPLIIFMGVGALTDFGALIANPKTLFLGAAAQFGIFTTLFGAILLNLVPGFEFSLQDASAIAIIGGADGPTAIFLASKLA
PDLLGPIAVAAYSYMALVPLIQPPIMRALTTQAEREIKMEQLRPVSKREKIIFPLAVLLMTILFLPAATPLVGMFCLGNL
MRESGVVERLSNTAQNELINIVTIFLGLGVGSKLSADKFLNLETLGILGLGAIAFSIGTASGVLMAKLMGKFSKDKINPL
IGAAGVSAVPMAARVANKVGLEANPHNFLLMHAMGPNVAGVLGSAVAAGVLLAIVG
>Mature_376_residues
MDGLITLWADTGIAHFTFPDLVMIAVGLLLLYLAIVRKFEPLLLLPIGFGAILANIPNAGFTEPGGILYYIYHVGIETGV
FPLIIFMGVGALTDFGALIANPKTLFLGAAAQFGIFTTLFGAILLNLVPGFEFSLQDASAIAIIGGADGPTAIFLASKLA
PDLLGPIAVAAYSYMALVPLIQPPIMRALTTQAEREIKMEQLRPVSKREKIIFPLAVLLMTILFLPAATPLVGMFCLGNL
MRESGVVERLSNTAQNELINIVTIFLGLGVGSKLSADKFLNLETLGILGLGAIAFSIGTASGVLMAKLMGKFSKDKINPL
IGAAGVSAVPMAARVANKVGLEANPHNFLLMHAMGPNVAGVLGSAVAAGVLLAIVG

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 39266; Mature: 39266

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLITLWADTGIAHFTFPDLVMIAVGLLLLYLAIVRKFEPLLLLPIGFGAILANIPNAG
CCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCC
FTEPGGILYYIYHVGIETGVFPLIIFMGVGALTDFGALIANPKTLFLGAAAQFGIFTTLF
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
GAILLNLVPGFEFSLQDASAIAIIGGADGPTAIFLASKLAPDLLGPIAVAAYSYMALVPL
HHHHHHHCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
IQPPIMRALTTQAEREIKMEQLRPVSKREKIIFPLAVLLMTILFLPAATPLVGMFCLGNL
HCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
MRESGVVERLSNTAQNELINIVTIFLGLGVGSKLSADKFLNLETLGILGLGAIAFSIGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCH
SGVLMAKLMGKFSKDKINPLIGAAGVSAVPMAARVANKVGLEANPHNFLLMHAMGPNVAG
HHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGVLLAIVG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGLITLWADTGIAHFTFPDLVMIAVGLLLLYLAIVRKFEPLLLLPIGFGAILANIPNAG
CCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCC
FTEPGGILYYIYHVGIETGVFPLIIFMGVGALTDFGALIANPKTLFLGAAAQFGIFTTLF
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
GAILLNLVPGFEFSLQDASAIAIIGGADGPTAIFLASKLAPDLLGPIAVAAYSYMALVPL
HHHHHHHCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
IQPPIMRALTTQAEREIKMEQLRPVSKREKIIFPLAVLLMTILFLPAATPLVGMFCLGNL
HCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
MRESGVVERLSNTAQNELINIVTIFLGLGVGSKLSADKFLNLETLGILGLGAIAFSIGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCH
SGVLMAKLMGKFSKDKINPLIGAAGVSAVPMAARVANKVGLEANPHNFLLMHAMGPNVAG
HHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGVLLAIVG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]