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The map label for this gene is yqaA [H]

Identifier: 119946979

GI number: 119946979

Start: 4167295

End: 4167711

Strand: Reverse

Name: yqaA [H]

Synonym: Ping_3374

Alternate gene names: 119946979

Gene position: 4167711-4167295 (Counterclockwise)

Preceding gene: 119946980

Following gene: 119946978

Centisome position: 91.41

GC content: 37.89

Gene sequence:

>417_bases
TTGTGGTCTGAATTAATTGTTTTGTTGGTCAGTAGTTTTGTTTCTGCCACTTTATTTCCCGGAGGATCTGAATTTTTACT
GATTTATTATATAAAAAATAATCCAAGTGACCTTTGGTGGTATTTTAGTGCTGTGACGCTGGGCAACAGTTTGGGTGCAC
TTAGCAGCTATTTTTTGGGTTTCTATGTTTGTGGTGGAATGGAAAAAGCGAAGTCTAAATACTTGAAAACGTGGATATTT
TGCAAAAAATATGGCCTATGGGCCTTATTATTAAGCTGGTTGCCCGTTGTTGGCGATTTTATTCCTTTGGCGGCAGGCTG
GTTAAAACTGCCCATCTTTCGCTCTATTTTATTGATAACATTAGGCAAAGCGTTGCGTTATGCTGTTATCACATTCGCTA
CACTGTCATTAATCTAA

Upstream 100 bases:

>100_bases
GTGTGCTTTTAGCAATCGTAGGGTAACTTACTGCTTCTATTAAGTTTTTTATAAAGGCCACTTTATTAAGTGGTCTTTTT
TATGGGTAAAGGAGTTTCAT

Downstream 100 bases:

>100_bases
GCATTTCTTTATATTTTCCCCCGGAACAACAGTTATTTATATGTTGTTCGGCGCTTATTATTTTTTTGAACTTGTAAATG
GTATCTTTATTAAGGTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MWSELIVLLVSSFVSATLFPGGSEFLLIYYIKNNPSDLWWYFSAVTLGNSLGALSSYFLGFYVCGGMEKAKSKYLKTWIF
CKKYGLWALLLSWLPVVGDFIPLAAGWLKLPIFRSILLITLGKALRYAVITFATLSLI

Sequences:

>Translated_138_residues
MWSELIVLLVSSFVSATLFPGGSEFLLIYYIKNNPSDLWWYFSAVTLGNSLGALSSYFLGFYVCGGMEKAKSKYLKTWIF
CKKYGLWALLLSWLPVVGDFIPLAAGWLKLPIFRSILLITLGKALRYAVITFATLSLI
>Mature_138_residues
MWSELIVLLVSSFVSATLFPGGSEFLLIYYIKNNPSDLWWYFSAVTLGNSLGALSSYFLGFYVCGGMEKAKSKYLKTWIF
CKKYGLWALLLSWLPVVGDFIPLAAGWLKLPIFRSILLITLGKALRYAVITFATLSLI

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=133, Percent_Identity=40.6015037593985, Blast_Score=87, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 15510; Mature: 15510

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSELIVLLVSSFVSATLFPGGSEFLLIYYIKNNPSDLWWYFSAVTLGNSLGALSSYFLG
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHH
FYVCGGMEKAKSKYLKTWIFCKKYGLWALLLSWLPVVGDFIPLAAGWLKLPIFRSILLIT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGKALRYAVITFATLSLI
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWSELIVLLVSSFVSATLFPGGSEFLLIYYIKNNPSDLWWYFSAVTLGNSLGALSSYFLG
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHH
FYVCGGMEKAKSKYLKTWIFCKKYGLWALLLSWLPVVGDFIPLAAGWLKLPIFRSILLIT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGKALRYAVITFATLSLI
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]