Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946881
Identifier: 119946881
GI number: 119946881
Start: 4042817
End: 4043077
Strand: Reverse
Name: 119946881
Synonym: Ping_3275
Alternate gene names: NA
Gene position: 4043077-4042817 (Counterclockwise)
Preceding gene: 119946882
Following gene: 119946879
Centisome position: 88.67
GC content: 39.46
Gene sequence:
>261_bases ATGGCGATTAAAAAAGTTAAATCAGAAGTTGAAAAGTTATCGGCCATTTTGGACGAGGATCTTATTGCTGATAAATGCAC TGCCGGAGACTTACGGCAGGTACATGATCAGCTTCAAGAGGCTATAAAATCTGGTGATCCGGCAAAATTGATCCGGGATA AAAAAATTGCCCAGCAACTGATTGTTTTTGAAGAAACTAATCCGGTTGTTGGTAAGGTGATTAAAGACCTCATTTTAGCC CTTTCCAGCATGGGAATATAA
Upstream 100 bases:
>100_bases ATGGGTTATTAATCCTAATATTAATAATTTTTTAGCCAAACCACTTAAGGGGAAGATTCAATTGGTTTGGTTTTAATTCA TTCACTGTACAGAGGTGTTT
Downstream 100 bases:
>100_bases ACCCGCTGAATTAAAGCGAGTAGGTTTGTATTTTTCCTGAAATATAGACATAAAAAACCGACATCCAGTCGGTTTTTTCA TTTTATTTGGTTAAACTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MAIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQLIVFEETNPVVGKVIKDLILA LSSMGI
Sequences:
>Translated_86_residues MAIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQLIVFEETNPVVGKVIKDLILA LSSMGI >Mature_85_residues AIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQLIVFEETNPVVGKVIKDLILAL SSMGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9426; Mature: 9295
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IVFEETNPVVGKVIKDLILALSSMGI HHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIKKVKSEVEKLSAILDEDLIADKCTAGDLRQVHDQLQEAIKSGDPAKLIRDKKIAQQL CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IVFEETNPVVGKVIKDLILALSSMGI HHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA