Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946882
Identifier: 119946882
GI number: 119946882
Start: 4043203
End: 4043421
Strand: Reverse
Name: 119946882
Synonym: Ping_3276
Alternate gene names: NA
Gene position: 4043421-4043203 (Counterclockwise)
Preceding gene: 119946883
Following gene: 119946881
Centisome position: 88.68
GC content: 30.14
Gene sequence:
>219_bases TTGGCTAAATTATGGTTAACCGATCGTGCTTATCCGTTATGGGCGTATATATTTCGTATCTTATACTGGTTATTTGCTAT TTATCTTTCCTCTTTATATTTACAACATTATTCATATCATGATTGGTTTAAAATTGGCCTGATGTTATTAAGTGTCTTTT TTGTTATTATCTCTTTATTATTAGGACGTTGTCTGGATCACTTTTTTAAACCAGGCTAA
Upstream 100 bases:
>100_bases TGTGCCGGTGTTGCCTTAGGAGTCGATCGCTTGGTAATGCTTGCCTGCGAGAAAAAACATATTGATGATGTTATCAGTTT TACAATTAAAGGAGCCTGAG
Downstream 100 bases:
>100_bases CTGAATTGTTTATTTTAAGACTATAATGGGTTATTAATCCTAATATTAATAATTTTTTAGCCAAACCACTTAAGGGGAAG ATTCAATTGGTTTGGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MAKLWLTDRAYPLWAYIFRILYWLFAIYLSSLYLQHYSYHDWFKIGLMLLSVFFVIISLLLGRCLDHFFKPG
Sequences:
>Translated_72_residues MAKLWLTDRAYPLWAYIFRILYWLFAIYLSSLYLQHYSYHDWFKIGLMLLSVFFVIISLLLGRCLDHFFKPG >Mature_71_residues AKLWLTDRAYPLWAYIFRILYWLFAIYLSSLYLQHYSYHDWFKIGLMLLSVFFVIISLLLGRCLDHFFKPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8800; Mature: 8668
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLWLTDRAYPLWAYIFRILYWLFAIYLSSLYLQHYSYHDWFKIGLMLLSVFFVIISLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH LGRCLDHFFKPG HHHHHHHHCCCC >Mature Secondary Structure AKLWLTDRAYPLWAYIFRILYWLFAIYLSSLYLQHYSYHDWFKIGLMLLSVFFVIISLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH LGRCLDHFFKPG HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA