Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946827
Identifier: 119946827
GI number: 119946827
Start: 3976824
End: 3977333
Strand: Reverse
Name: 119946827
Synonym: Ping_3221
Alternate gene names: NA
Gene position: 3977333-3976824 (Counterclockwise)
Preceding gene: 119946828
Following gene: 119946826
Centisome position: 87.23
GC content: 36.86
Gene sequence:
>510_bases ATGACGTTATTTGCAGAAAATGAACACTTAACTGTTCGTCAATTTATAGCATCTGATCTCAATGATTTTACTATGCTGGT AAGTAATGCTAAGAGCATGAAATATTGCCCAACGGGTACATTAAATCGCCAACAAGCAGAAAAATTATTCACTAATATCA TGACTCATGCACAGCGTTACAAGTATTGCCTTTACGCCATTGAAGATAAAAAATACAGTAAAGTCATTGGCTTGGTCGGT CTGCAGGAGTGTCGTATGGAATACGATATTGGACCAAGTTTTGTGTATCGTCTGTTGCCGGAATATAACGACAATATCAC TATCCCCGCTTTATTTTCTCAATTTATTAAAAACCTTATGGTAAGCCTTCAGCTTTCAGAAATGAACGCGGTCATTGCCA AAAAAAATCGACTGACATTAACCCTTATGGAGTCTTTACACTTTAAACCGATATCTACTCTCGTTTGCCGCGGTATTGAT AGTTTTTTGTATCAATATTCACCCGTGTAA
Upstream 100 bases:
>100_bases GTTTTTTACTATTTTGAGTAATCTATAAGTAATTTGCTGTTGATTTTTTGTACGATTTTAGTATAAAGGTTATATGATAA ATAACCGCAGAAATTAAAAT
Downstream 100 bases:
>100_bases ATAAATTTATCTTTTAAAGGCATATCAAGCGAGATGTTTTATTGTTTTATTGAATAAAACGGCTCAAATTGCCATCGTTT TCGGGTAGAATGCTCATCTT
Product: acetyltransferase, GNAT family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTLFAENEHLTVRQFIASDLNDFTMLVSNAKSMKYCPTGTLNRQQAEKLFTNIMTHAQRYKYCLYAIEDKKYSKVIGLVG LQECRMEYDIGPSFVYRLLPEYNDNITIPALFSQFIKNLMVSLQLSEMNAVIAKKNRLTLTLMESLHFKPISTLVCRGID SFLYQYSPV
Sequences:
>Translated_169_residues MTLFAENEHLTVRQFIASDLNDFTMLVSNAKSMKYCPTGTLNRQQAEKLFTNIMTHAQRYKYCLYAIEDKKYSKVIGLVG LQECRMEYDIGPSFVYRLLPEYNDNITIPALFSQFIKNLMVSLQLSEMNAVIAKKNRLTLTLMESLHFKPISTLVCRGID SFLYQYSPV >Mature_168_residues TLFAENEHLTVRQFIASDLNDFTMLVSNAKSMKYCPTGTLNRQQAEKLFTNIMTHAQRYKYCLYAIEDKKYSKVIGLVGL QECRMEYDIGPSFVYRLLPEYNDNITIPALFSQFIKNLMVSLQLSEMNAVIAKKNRLTLTLMESLHFKPISTLVCRGIDS FLYQYSPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19548; Mature: 19417
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFAENEHLTVRQFIASDLNDFTMLVSNAKSMKYCPTGTLNRQQAEKLFTNIMTHAQRY CCEECCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KYCLYAIEDKKYSKVIGLVGLQECRMEYDIGPSFVYRLLPEYNDNITIPALFSQFIKNLM HHHEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHH VSLQLSEMNAVIAKKNRLTLTLMESLHFKPISTLVCRGIDSFLYQYSPV HHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLFAENEHLTVRQFIASDLNDFTMLVSNAKSMKYCPTGTLNRQQAEKLFTNIMTHAQRY CEECCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KYCLYAIEDKKYSKVIGLVGLQECRMEYDIGPSFVYRLLPEYNDNITIPALFSQFIKNLM HHHEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHH VSLQLSEMNAVIAKKNRLTLTLMESLHFKPISTLVCRGIDSFLYQYSPV HHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA