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The map label for this gene is 119946756

Identifier: 119946756

GI number: 119946756

Start: 3876128

End: 3876733

Strand: Reverse

Name: 119946756

Synonym: Ping_3149

Alternate gene names: NA

Gene position: 3876733-3876128 (Counterclockwise)

Preceding gene: 119946757

Following gene: 119946755

Centisome position: 85.02

GC content: 33.83

Gene sequence:

>606_bases
TTGTTAAAACTTGAGAAGCTATTTGATAAATTTGCAGATGGTATTGGAATCATTACATCTATTGCTATGGTGTTAATGAT
TCTAAATGTATTTTATGATGTTATTACAAGGTATGTTTTTAATACAAGCAGTATTGGCATGCAGGAGATGGAGTGGCATC
TTTTTTCAGTTATCATCTTGCTGGGCGTGGCTTATACGCTAAAAGATGATGGACATGTCAGGGTTGATATCATTTATGAT
AATCTTTCATATAGAAAGAAAGCGATGATAAATATGCTTGGCGCTATTTTCTTTATCTTACCTATCTCGCTGCTGGTTGG
CATCAGTTCGATTGACAATGCTGTTTCCGCTTATGCTTCCATGGAACAAAGTGGTAACCCCGGTGGATTACAATATAGAT
GGATTGTCAAAGCATTAATTCCACTTTCATTTCTTTTATTAATTATTACATCGGTAGGTTTTTTTATAAAAAATTTAAAT
GTATACAATGGATTGCACCCCTTAGAAATGGATAGAATCAGACACGAAGCTGAAGATATTAAGCATGATCTTGATGAACA
TAAGCACCACATTGTAGATATTGATGAAAAAGGAGAGTCAAAATGA

Upstream 100 bases:

>100_bases
CATAATAATATTATACTCATTCGATTTTTTACAGTAGGCAAAGGATTTTTATTTTGTTAAAACCTGACACGATATTACAG
TACCCCAAAGGAGTTTTATT

Downstream 100 bases:

>100_bases
TTGGCATCTCAATGTTTTTTACGGCGCTGCTTCTGTTACTGATCGGATTCCCTGTTGCTTTCACATTTGCGGCTGTTGCT
GTGTTTTTTGGCATGATCGC

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; C4-Dicarboxylate Transporter Permease; Trap Dicarboxylate Transporter Dctm Subunit; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Large Permease Component; Permease Component Of C4 Dicarboxylate Transporter; TRAP Transporter Small Transmembrane Protein; Permease; Transporter DctQ-Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP Transporter DctQ Family Protein; TRAP-Type Transport System Small Permease Component; Transmembrane Transporter Component; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; TRAP C4-Dicarboxylate Transport System DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type Transporter Small Permease Component; C4-Dicarboxylate Transporter Small Subunit; Small Permease Of TRAP-Type Transporter; TRAP Transporter; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLKLEKLFDKFADGIGIITSIAMVLMILNVFYDVITRYVFNTSSIGMQEMEWHLFSVIILLGVAYTLKDDGHVRVDIIYD
NLSYRKKAMINMLGAIFFILPISLLVGISSIDNAVSAYASMEQSGNPGGLQYRWIVKALIPLSFLLLIITSVGFFIKNLN
VYNGLHPLEMDRIRHEAEDIKHDLDEHKHHIVDIDEKGESK

Sequences:

>Translated_201_residues
MLKLEKLFDKFADGIGIITSIAMVLMILNVFYDVITRYVFNTSSIGMQEMEWHLFSVIILLGVAYTLKDDGHVRVDIIYD
NLSYRKKAMINMLGAIFFILPISLLVGISSIDNAVSAYASMEQSGNPGGLQYRWIVKALIPLSFLLLIITSVGFFIKNLN
VYNGLHPLEMDRIRHEAEDIKHDLDEHKHHIVDIDEKGESK
>Mature_201_residues
MLKLEKLFDKFADGIGIITSIAMVLMILNVFYDVITRYVFNTSSIGMQEMEWHLFSVIILLGVAYTLKDDGHVRVDIIYD
NLSYRKKAMINMLGAIFFILPISLLVGISSIDNAVSAYASMEQSGNPGGLQYRWIVKALIPLSFLLLIITSVGFFIKNLN
VYNGLHPLEMDRIRHEAEDIKHDLDEHKHHIVDIDEKGESK

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22846; Mature: 22846

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLEKLFDKFADGIGIITSIAMVLMILNVFYDVITRYVFNTSSIGMQEMEWHLFSVIIL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LGVAYTLKDDGHVRVDIIYDNLSYRKKAMINMLGAIFFILPISLLVGISSIDNAVSAYAS
HHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEQSGNPGGLQYRWIVKALIPLSFLLLIITSVGFFIKNLNVYNGLHPLEMDRIRHEAEDI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KHDLDEHKHHIVDIDEKGESK
HHHHHHHHHHEECCCCCCCCC
>Mature Secondary Structure
MLKLEKLFDKFADGIGIITSIAMVLMILNVFYDVITRYVFNTSSIGMQEMEWHLFSVIIL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LGVAYTLKDDGHVRVDIIYDNLSYRKKAMINMLGAIFFILPISLLVGISSIDNAVSAYAS
HHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEQSGNPGGLQYRWIVKALIPLSFLLLIITSVGFFIKNLNVYNGLHPLEMDRIRHEAEDI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KHDLDEHKHHIVDIDEKGESK
HHHHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA