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The map label for this gene is yiaN [C]

Identifier: 119946755

GI number: 119946755

Start: 3874758

End: 3876131

Strand: Reverse

Name: yiaN [C]

Synonym: Ping_3148

Alternate gene names: 119946755

Gene position: 3876131-3874758 (Counterclockwise)

Preceding gene: 119946756

Following gene: 119946754

Centisome position: 85.01

GC content: 39.59

Gene sequence:

>1374_bases
ATGATTGGCATCTCAATGTTTTTTACGGCGCTGCTTCTGTTACTGATCGGATTCCCTGTTGCTTTCACATTTGCGGCTGT
TGCTGTGTTTTTTGGCATGATCGCAGGTATCGTAGAAATTTATTCTTACGGCGGATTTGATGCCGGGCTGATATCTGGTC
TTATTGAGGGACTCAATGAAGGCGTAGCGATGTTTGGCTATATGCCATATCGCATTTTTGCAATACAGCAAAATACAATT
TTAATGGCTATTCCTATGTTTATCTTTATGGGCATAGTGTTACAAAAAACAGGACTTGCTGAAAAACTTTTAGAGTCCAT
GGGCTTTCTATTTGGTGAGATTCGAGGTGGGATAGCAATTTCAACTGTGTTGGTGGGCTCTTTATTAGCGGCATCCACCG
GTGTTGTTGGCGCATCTGTTGTGGCGATGGGAGTGATTTCACTTCCGGTTATGATGAAATATAAATACAGTACAGAATTA
GCCACAGGGACTATCTGTGCGTCGGGTACGCTTGGACAAATAATTCCTCCTTCAATAGTACTGATTATTCTTGGGGATGT
GTTTCAAGTTCCGGTAGGAGATCTTTTTAAAGCGGCTGTATGGCCAGCACTAACGCTGGTTGCATCGTATATTGTCTATA
TATTGATAGTTTCCTATATTAAAAAAGATGTCGCACCCGCAATTCCTGCTGATCCTAGTCGTGGATCAAAGAAGAAACAG
GTATACAAAGCGCTTATTGATATCATTCCATCACTCACCCTGATTATTTTAGTGCTTGGTTCGATTTTTGGAGGCATTGC
AACGCCAACGGAATCTTCAGCTGTCGGATCAATTGGAGCGGTCGGTTTAGCTTTGATGTATAAAACTTTTTCAATAGACA
TGATAAAAATGGCAGCACAGGAATCTGTCAAGATAACATCGATGGTTTTTGCTATTTTAATCGGGGCGACTGCCTTTTCA
ATGGTATTTTCTTATACTGGCGGAGAAGAGATAGTTACCGAGTTTATGAATAATCTGCCTGGTGATAATAAGACTTCATT
TATTCTCTTTACCATGCTTGCTATCCTGATTTTAGGGTTCTTTATCGATTTTGTTGAGATATCCTATATTATAGTGCCAA
TTATAGTGCCAATAGCAGCAGCTTTAGGAATAAACCCCGTATGGTTTGCAATATTGATTGCGATGAATTTACAAACGTCA
TTTTTGACCCCGCCGTTTGGATTTTCACTGTTTTATTTAAAAGGTGTTGCACCTCCATCGGTGAGTACAGTGCAAATTTA
TAGAGGTGTAATACCCTTTATACTGATACAAATTGTTGTATTAGGTGTTCTCGCTTTTTATCCAGAATTCTTTGGTATTG
ACTCAATGATGTAA

Upstream 100 bases:

>100_bases
TAGAAATGGATAGAATCAGACACGAAGCTGAAGATATTAAGCATGATCTTGATGAACATAAGCACCACATTGTAGATATT
GATGAAAAAGGAGAGTCAAA

Downstream 100 bases:

>100_bases
TAGTTAGCTTTAGGTAATTATAGAGCTAGATTTAAGTCATTAAATCTAGCTCTACTTTTCTGTTATTATTGTTGTTACTT
ATATAAATACTCTCAAAAGC

Product: TRAP dicarboxylate transporter, DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MIGISMFFTALLLLLIGFPVAFTFAAVAVFFGMIAGIVEIYSYGGFDAGLISGLIEGLNEGVAMFGYMPYRIFAIQQNTI
LMAIPMFIFMGIVLQKTGLAEKLLESMGFLFGEIRGGIAISTVLVGSLLAASTGVVGASVVAMGVISLPVMMKYKYSTEL
ATGTICASGTLGQIIPPSIVLIILGDVFQVPVGDLFKAAVWPALTLVASYIVYILIVSYIKKDVAPAIPADPSRGSKKKQ
VYKALIDIIPSLTLIILVLGSIFGGIATPTESSAVGSIGAVGLALMYKTFSIDMIKMAAQESVKITSMVFAILIGATAFS
MVFSYTGGEEIVTEFMNNLPGDNKTSFILFTMLAILILGFFIDFVEISYIIVPIIVPIAAALGINPVWFAILIAMNLQTS
FLTPPFGFSLFYLKGVAPPSVSTVQIYRGVIPFILIQIVVLGVLAFYPEFFGIDSMM

Sequences:

>Translated_457_residues
MIGISMFFTALLLLLIGFPVAFTFAAVAVFFGMIAGIVEIYSYGGFDAGLISGLIEGLNEGVAMFGYMPYRIFAIQQNTI
LMAIPMFIFMGIVLQKTGLAEKLLESMGFLFGEIRGGIAISTVLVGSLLAASTGVVGASVVAMGVISLPVMMKYKYSTEL
ATGTICASGTLGQIIPPSIVLIILGDVFQVPVGDLFKAAVWPALTLVASYIVYILIVSYIKKDVAPAIPADPSRGSKKKQ
VYKALIDIIPSLTLIILVLGSIFGGIATPTESSAVGSIGAVGLALMYKTFSIDMIKMAAQESVKITSMVFAILIGATAFS
MVFSYTGGEEIVTEFMNNLPGDNKTSFILFTMLAILILGFFIDFVEISYIIVPIIVPIAAALGINPVWFAILIAMNLQTS
FLTPPFGFSLFYLKGVAPPSVSTVQIYRGVIPFILIQIVVLGVLAFYPEFFGIDSMM
>Mature_457_residues
MIGISMFFTALLLLLIGFPVAFTFAAVAVFFGMIAGIVEIYSYGGFDAGLISGLIEGLNEGVAMFGYMPYRIFAIQQNTI
LMAIPMFIFMGIVLQKTGLAEKLLESMGFLFGEIRGGIAISTVLVGSLLAASTGVVGASVVAMGVISLPVMMKYKYSTEL
ATGTICASGTLGQIIPPSIVLIILGDVFQVPVGDLFKAAVWPALTLVASYIVYILIVSYIKKDVAPAIPADPSRGSKKKQ
VYKALIDIIPSLTLIILVLGSIFGGIATPTESSAVGSIGAVGLALMYKTFSIDMIKMAAQESVKITSMVFAILIGATAFS
MVFSYTGGEEIVTEFMNNLPGDNKTSFILFTMLAILILGFFIDFVEISYIIVPIIVPIAAALGINPVWFAILIAMNLQTS
FLTPPFGFSLFYLKGVAPPSVSTVQIYRGVIPFILIQIVVLGVLAFYPEFFGIDSMM

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=371, Percent_Identity=25.8760107816712, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 48715; Mature: 48715

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGISMFFTALLLLLIGFPVAFTFAAVAVFFGMIAGIVEIYSYGGFDAGLISGLIEGLNE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GVAMFGYMPYRIFAIQQNTILMAIPMFIFMGIVLQKTGLAEKLLESMGFLFGEIRGGIAI
CHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHH
STVLVGSLLAASTGVVGASVVAMGVISLPVMMKYKYSTELATGTICASGTLGQIIPPSIV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCEECCCCCCCCCCHHHH
LIILGDVFQVPVGDLFKAAVWPALTLVASYIVYILIVSYIKKDVAPAIPADPSRGSKKKQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VYKALIDIIPSLTLIILVLGSIFGGIATPTESSAVGSIGAVGLALMYKTFSIDMIKMAAQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ESVKITSMVFAILIGATAFSMVFSYTGGEEIVTEFMNNLPGDNKTSFILFTMLAILILGF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FIDFVEISYIIVPIIVPIAAALGINPVWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPPS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCHHHHEECCCCCC
VSTVQIYRGVIPFILIQIVVLGVLAFYPEFFGIDSMM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIGISMFFTALLLLLIGFPVAFTFAAVAVFFGMIAGIVEIYSYGGFDAGLISGLIEGLNE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GVAMFGYMPYRIFAIQQNTILMAIPMFIFMGIVLQKTGLAEKLLESMGFLFGEIRGGIAI
CHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHH
STVLVGSLLAASTGVVGASVVAMGVISLPVMMKYKYSTELATGTICASGTLGQIIPPSIV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCEECCCCCCCCCCHHHH
LIILGDVFQVPVGDLFKAAVWPALTLVASYIVYILIVSYIKKDVAPAIPADPSRGSKKKQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VYKALIDIIPSLTLIILVLGSIFGGIATPTESSAVGSIGAVGLALMYKTFSIDMIKMAAQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ESVKITSMVFAILIGATAFSMVFSYTGGEEIVTEFMNNLPGDNKTSFILFTMLAILILGF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FIDFVEISYIIVPIIVPIAAALGINPVWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPPS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCHHHHEECCCCCC
VSTVQIYRGVIPFILIQIVVLGVLAFYPEFFGIDSMM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]