| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is rhlE [H]
Identifier: 119945503
GI number: 119945503
Start: 2192473
End: 2193774
Strand: Reverse
Name: rhlE [H]
Synonym: Ping_1807
Alternate gene names: 119945503
Gene position: 2193774-2192473 (Counterclockwise)
Preceding gene: 119945505
Following gene: 119945502
Centisome position: 48.11
GC content: 42.01
Gene sequence:
>1302_bases ATGAGTGTTGATGCAATAGGTTTATCTGCCGAGTTATTAAAAGCTGTCAAAGCTTGCGGATATAAAAATTTAACCCCGAT TCAGCAGCAGGCAATTCCGATTATCCGTAGCGGGTCGGATCTGCTTGCAAGTGCACAAACAGGGACAGGTAAAACAGCGG CTTTTACCCTGCCTATTCTGGATATATTAGCAAAAAATGCGAATGAAAAGCCAACAACAAATACAACAATTAAAGCCTTA ATACTGACACCTACGCGTGAATTAGCAGCCCAAGTTGCAGCGAATGTAAAGGAATACAGTCAGTTTTTACCGCTAACATC CGGTGTTGTTTCGGGTGGCCGCAGTATGGACTCACAAACCAAAATGCTTAAAGTCGGCGTTGATGTATTAGTCGCAACAC CGGGTCGTCTGCTTGAACACTTAACCTTACGAAATGTCGATCTTTCCCATGTTAAGTATCTTACGCTTGATGAAGCTGAT CGTATGTTAGACCTGGGTTTCTTAACTGACATACAAAAATTGATGGAAGCGATTAAACAAAAACACCAGACTTTAATGTT TTCCGCCACTTTTTCAAATAAAGTTAAAACATTAGCAAAACAGATATTAACCACCCCAAAAACATTAGAGATCTCACCGC AGAACTCAACTGCTGGTAAGGTAAAACAACAGGTTTATTGGGTATCTGAAACCCGTAAGAATGAACTCTTATCTGAGCTG ATTGGGGTTAAAAACTGGAAACAAGTGTTGGTCTTTGCGGGCACCAAAGAAAGCGCCAATCTGTTAGCAAAAGAGTTACA GCTAGACGGAATCAAAACGGCCGTTTGCCATGGAGATAAAACCCAAGGCGCACGTAATCAAGCGATCCAAAAGTTTACTG AAGGCAGTGTCCGTGTGTTAGTGGCGACAGATGTGGCAGCACGTGGCCTTGATATTCCTGATTTACCCTACGTGGTCAAC TTCCATCTTCCATTTTTAGCTGAAGATTATATTCATCGTATTGGCCGTACAGCGCGGGCAGGTAAAAGTGGTACAGCGGT ATCATTAGTCAGCCCGAAAGATGAGCAATTTTTAGATAATATCGAAACGCTAATTGGCCGTAAGTTTGAACGCATTGTGT ATCCGGGTTATGAGATTGATAGCTCCCTGCCCGGCTATTATGAGCAATCTAGTGACAAACCGCTGAAAAAAAGTCGTTAC AAAGCAACGCAAGAGCGCAATAAAATGCTTGAGATCCAAAGAGCAAAAAATACACCTGCGGCCATTCGCAGAGAAAAGAA CAAAAATAAAAAGCAAAGATAA
Upstream 100 bases:
>100_bases ATGCTAAGAAAATATTTCATATTATTAAGTCCATTTTTTTTGTAACTGTTATACTCGCGCCCAATTAAACTTTCAAAAAA AATATAAAAATGGTGATCTC
Downstream 100 bases:
>100_bases GACAAGATAACAATATAATAAAATAAGACAGAGGCACTAAGCGTCTCTGTCTTATCTCTTAGCAATAAACTATTAACAGC AATCATTCCCCCTATTCTCT
Product: ATP-dependent RNA helicase, DEAD box family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSVDAIGLSAELLKAVKACGYKNLTPIQQQAIPIIRSGSDLLASAQTGTGKTAAFTLPILDILAKNANEKPTTNTTIKAL ILTPTRELAAQVAANVKEYSQFLPLTSGVVSGGRSMDSQTKMLKVGVDVLVATPGRLLEHLTLRNVDLSHVKYLTLDEAD RMLDLGFLTDIQKLMEAIKQKHQTLMFSATFSNKVKTLAKQILTTPKTLEISPQNSTAGKVKQQVYWVSETRKNELLSEL IGVKNWKQVLVFAGTKESANLLAKELQLDGIKTAVCHGDKTQGARNQAIQKFTEGSVRVLVATDVAARGLDIPDLPYVVN FHLPFLAEDYIHRIGRTARAGKSGTAVSLVSPKDEQFLDNIETLIGRKFERIVYPGYEIDSSLPGYYEQSSDKPLKKSRY KATQERNKMLEIQRAKNTPAAIRREKNKNKKQR
Sequences:
>Translated_433_residues MSVDAIGLSAELLKAVKACGYKNLTPIQQQAIPIIRSGSDLLASAQTGTGKTAAFTLPILDILAKNANEKPTTNTTIKAL ILTPTRELAAQVAANVKEYSQFLPLTSGVVSGGRSMDSQTKMLKVGVDVLVATPGRLLEHLTLRNVDLSHVKYLTLDEAD RMLDLGFLTDIQKLMEAIKQKHQTLMFSATFSNKVKTLAKQILTTPKTLEISPQNSTAGKVKQQVYWVSETRKNELLSEL IGVKNWKQVLVFAGTKESANLLAKELQLDGIKTAVCHGDKTQGARNQAIQKFTEGSVRVLVATDVAARGLDIPDLPYVVN FHLPFLAEDYIHRIGRTARAGKSGTAVSLVSPKDEQFLDNIETLIGRKFERIVYPGYEIDSSLPGYYEQSSDKPLKKSRY KATQERNKMLEIQRAKNTPAAIRREKNKNKKQR >Mature_432_residues SVDAIGLSAELLKAVKACGYKNLTPIQQQAIPIIRSGSDLLASAQTGTGKTAAFTLPILDILAKNANEKPTTNTTIKALI LTPTRELAAQVAANVKEYSQFLPLTSGVVSGGRSMDSQTKMLKVGVDVLVATPGRLLEHLTLRNVDLSHVKYLTLDEADR MLDLGFLTDIQKLMEAIKQKHQTLMFSATFSNKVKTLAKQILTTPKTLEISPQNSTAGKVKQQVYWVSETRKNELLSELI GVKNWKQVLVFAGTKESANLLAKELQLDGIKTAVCHGDKTQGARNQAIQKFTEGSVRVLVATDVAARGLDIPDLPYVVNF HLPFLAEDYIHRIGRTARAGKSGTAVSLVSPKDEQFLDNIETLIGRKFERIVYPGYEIDSSLPGYYEQSSDKPLKKSRYK ATQERNKMLEIQRAKNTPAAIRREKNKNKKQR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=365, Percent_Identity=38.0821917808219, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=37.431693989071, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=37.431693989071, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI21071032, Length=372, Percent_Identity=37.6344086021505, Blast_Score=245, Evalue=5e-65, Organism=Homo sapiens, GI222352149, Length=371, Percent_Identity=38.0053908355795, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=38.7362637362637, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI262118318, Length=369, Percent_Identity=38.2113821138211, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI301171467, Length=351, Percent_Identity=39.6011396011396, Blast_Score=241, Evalue=7e-64, Organism=Homo sapiens, GI41327771, Length=375, Percent_Identity=36.8, Blast_Score=241, Evalue=7e-64, Organism=Homo sapiens, GI216548263, Length=369, Percent_Identity=38.2113821138211, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI87196351, Length=351, Percent_Identity=39.6011396011396, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI301171475, Length=351, Percent_Identity=39.6011396011396, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI13518015, Length=369, Percent_Identity=38.2113821138211, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI262231852, Length=369, Percent_Identity=38.2113821138211, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI169881239, Length=351, Percent_Identity=39.6011396011396, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI13514809, Length=351, Percent_Identity=39.6011396011396, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=36.1930294906166, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI164419743, Length=365, Percent_Identity=36.7123287671233, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI51094101, Length=365, Percent_Identity=36.7123287671233, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=36.8983957219251, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI4758138, Length=365, Percent_Identity=36.7123287671233, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI148613856, Length=333, Percent_Identity=38.1381381381381, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI38201710, Length=333, Percent_Identity=38.1381381381381, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI55749865, Length=366, Percent_Identity=34.9726775956284, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI188035877, Length=340, Percent_Identity=38.2352941176471, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=35.1421188630491, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI41327776, Length=373, Percent_Identity=34.0482573726542, Blast_Score=211, Evalue=8e-55, Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=32.5966850828729, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI50659095, Length=378, Percent_Identity=34.1269841269841, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI164664518, Length=393, Percent_Identity=32.0610687022901, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI38569505, Length=370, Percent_Identity=34.3243243243243, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI38327634, Length=351, Percent_Identity=33.6182336182336, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI38569503, Length=370, Percent_Identity=34.3243243243243, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI41327779, Length=372, Percent_Identity=32.258064516129, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI13514831, Length=363, Percent_Identity=33.8842975206612, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=32.5581395348837, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI21040371, Length=389, Percent_Identity=30.5912596401028, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI17505907, Length=415, Percent_Identity=29.6385542168675, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI4758112, Length=360, Percent_Identity=30, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI18375623, Length=360, Percent_Identity=30, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=31.4070351758794, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=32.0413436692506, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI4503529, Length=376, Percent_Identity=31.9148936170213, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI83700235, Length=376, Percent_Identity=31.6489361702128, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=32.520325203252, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI62241024, Length=352, Percent_Identity=32.9545454545455, Blast_Score=171, Evalue=8e-43, Organism=Homo sapiens, GI164419732, Length=349, Percent_Identity=32.378223495702, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI4826686, Length=349, Percent_Identity=32.0916905444126, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI256223453, Length=363, Percent_Identity=29.2011019283747, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI154759257, Length=415, Percent_Identity=28.1927710843373, Blast_Score=148, Evalue=8e-36, Organism=Homo sapiens, GI9966805, Length=323, Percent_Identity=31.5789473684211, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI256773275, Length=402, Percent_Identity=29.3532338308458, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI20336298, Length=212, Percent_Identity=34.9056603773585, Blast_Score=129, Evalue=6e-30, Organism=Escherichia coli, GI1787016, Length=384, Percent_Identity=52.34375, Blast_Score=406, Evalue=1e-114, Organism=Escherichia coli, GI87082221, Length=375, Percent_Identity=37.0666666666667, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1790214, Length=396, Percent_Identity=36.6161616161616, Blast_Score=255, Evalue=4e-69, Organism=Escherichia coli, GI1788930, Length=363, Percent_Identity=39.1184573002755, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1787605, Length=347, Percent_Identity=39.4812680115274, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI48994977, Length=341, Percent_Identity=22.8739002932551, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI32565321, Length=375, Percent_Identity=38.9333333333333, Blast_Score=261, Evalue=4e-70, Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=36.5038560411311, Blast_Score=244, Evalue=8e-65, Organism=Caenorhabditis elegans, GI17510309, Length=373, Percent_Identity=38.3378016085791, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17510307, Length=373, Percent_Identity=38.3378016085791, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71995514, Length=373, Percent_Identity=38.3378016085791, Blast_Score=238, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71999646, Length=441, Percent_Identity=34.6938775510204, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI71999644, Length=441, Percent_Identity=34.6938775510204, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=35.3723404255319, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI115533224, Length=335, Percent_Identity=40, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17555296, Length=370, Percent_Identity=34.5945945945946, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI86570094, Length=374, Percent_Identity=36.6310160427808, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI17552642, Length=350, Percent_Identity=36, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI115532548, Length=380, Percent_Identity=35, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI115532546, Length=380, Percent_Identity=35, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI17507945, Length=339, Percent_Identity=36.5781710914454, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI71995724, Length=362, Percent_Identity=33.1491712707182, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=31.5508021390374, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507121, Length=362, Percent_Identity=32.8729281767956, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17537549, Length=376, Percent_Identity=32.9787234042553, Blast_Score=211, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17507877, Length=364, Percent_Identity=35.7142857142857, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507881, Length=364, Percent_Identity=35.7142857142857, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17505370, Length=356, Percent_Identity=37.6404494382022, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17552114, Length=365, Percent_Identity=31.5068493150685, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507879, Length=364, Percent_Identity=35.4395604395604, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17509811, Length=378, Percent_Identity=34.3915343915344, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17508543, Length=416, Percent_Identity=31.25, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17556951, Length=381, Percent_Identity=32.2834645669291, Blast_Score=175, Evalue=3e-44, Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=33.420365535248, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=28.9772727272727, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17507641, Length=411, Percent_Identity=30.4136253041363, Blast_Score=161, Evalue=7e-40, Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=31.1614730878187, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI25148203, Length=420, Percent_Identity=26.4285714285714, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI193206561, Length=397, Percent_Identity=27.455919395466, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI32564046, Length=394, Percent_Identity=30.4568527918782, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17536099, Length=383, Percent_Identity=28.7206266318538, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17536101, Length=383, Percent_Identity=28.7206266318538, Blast_Score=148, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17536103, Length=384, Percent_Identity=28.6458333333333, Blast_Score=144, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17553716, Length=368, Percent_Identity=25.2717391304348, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI25148205, Length=345, Percent_Identity=26.6666666666667, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71997889, Length=379, Percent_Identity=29.023746701847, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI25148291, Length=337, Percent_Identity=24.0356083086053, Blast_Score=118, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=30.6532663316583, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17557982, Length=416, Percent_Identity=25, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17566630, Length=342, Percent_Identity=24.5614035087719, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324778, Length=370, Percent_Identity=36.4864864864865, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=37.883008356546, Blast_Score=245, Evalue=8e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=38.268156424581, Blast_Score=241, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6321856, Length=398, Percent_Identity=37.1859296482412, Blast_Score=239, Evalue=6e-64, Organism=Saccharomyces cerevisiae, GI6321360, Length=365, Percent_Identity=39.4520547945205, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=358, Percent_Identity=37.9888268156425, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=376, Percent_Identity=35.6382978723404, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=361, Percent_Identity=34.0720221606648, Blast_Score=209, Evalue=8e-55, Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=35.5371900826446, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320173, Length=452, Percent_Identity=29.8672566371681, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=31.7808219178082, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=368, Percent_Identity=34.7826086956522, Blast_Score=199, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=380, Percent_Identity=32.3684210526316, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6319714, Length=372, Percent_Identity=31.7204301075269, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320119, Length=382, Percent_Identity=31.9371727748691, Blast_Score=190, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=33.509234828496, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6320400, Length=384, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=9e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=381, Percent_Identity=28.8713910761155, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=421, Percent_Identity=29.6912114014252, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322912, Length=375, Percent_Identity=30.6666666666667, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6322323, Length=375, Percent_Identity=30.6666666666667, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=416, Percent_Identity=27.1634615384615, Blast_Score=152, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=364, Percent_Identity=30.4945054945055, Blast_Score=149, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6324366, Length=427, Percent_Identity=26.9320843091335, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=421, Percent_Identity=27.0783847980998, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321374, Length=440, Percent_Identity=25, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI24584399, Length=347, Percent_Identity=39.4812680115274, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24642151, Length=361, Percent_Identity=37.3961218836565, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI21355075, Length=347, Percent_Identity=39.193083573487, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI17985987, Length=389, Percent_Identity=38.0462724935733, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24584994, Length=397, Percent_Identity=35.264483627204, Blast_Score=245, Evalue=3e-65, Organism=Drosophila melanogaster, GI21356161, Length=361, Percent_Identity=38.5041551246537, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=37.940379403794, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24662330, Length=362, Percent_Identity=37.0165745856354, Blast_Score=241, Evalue=7e-64, Organism=Drosophila melanogaster, GI24585582, Length=365, Percent_Identity=36.1643835616438, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=38.1471389645777, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI17977678, Length=368, Percent_Identity=36.1413043478261, Blast_Score=231, Evalue=5e-61, Organism=Drosophila melanogaster, GI24644479, Length=352, Percent_Identity=37.2159090909091, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644487, Length=352, Percent_Identity=37.2159090909091, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI45551833, Length=352, Percent_Identity=37.2159090909091, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644485, Length=352, Percent_Identity=37.2159090909091, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI281361218, Length=352, Percent_Identity=37.2159090909091, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644481, Length=352, Percent_Identity=37.2159090909091, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644483, Length=352, Percent_Identity=37.2159090909091, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=36.1823361823362, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24583281, Length=365, Percent_Identity=33.972602739726, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI24583279, Length=365, Percent_Identity=33.972602739726, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI17136814, Length=375, Percent_Identity=35.7333333333333, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24645031, Length=362, Percent_Identity=32.3204419889503, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=31.7333333333333, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=31.7333333333333, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=31.7333333333333, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=31.7333333333333, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI28571808, Length=357, Percent_Identity=33.0532212885154, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI28571809, Length=357, Percent_Identity=33.0532212885154, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI24581954, Length=352, Percent_Identity=30.6818181818182, Blast_Score=184, Evalue=7e-47, Organism=Drosophila melanogaster, GI24581952, Length=352, Percent_Identity=30.6818181818182, Blast_Score=184, Evalue=7e-47, Organism=Drosophila melanogaster, GI24581956, Length=352, Percent_Identity=30.6818181818182, Blast_Score=184, Evalue=7e-47, Organism=Drosophila melanogaster, GI24666101, Length=353, Percent_Identity=34.2776203966006, Blast_Score=184, Evalue=9e-47, Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=34.8387096774194, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24642822, Length=373, Percent_Identity=31.9034852546917, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=26.6666666666667, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24643725, Length=397, Percent_Identity=28.2115869017632, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=28.5714285714286, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI17136666, Length=422, Percent_Identity=27.9620853080569, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI19920478, Length=357, Percent_Identity=31.3725490196078, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI24668515, Length=366, Percent_Identity=29.2349726775956, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI18859659, Length=234, Percent_Identity=32.9059829059829, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI28571338, Length=234, Percent_Identity=32.9059829059829, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=26.628895184136, Blast_Score=124, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47789; Mature: 47658
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDAIGLSAELLKAVKACGYKNLTPIQQQAIPIIRSGSDLLASAQTGTGKTAAFTLPIL CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCEECCCHHHEECCCCCCCCEEEHHHHH DILAKNANEKPTTNTTIKALILTPTRELAAQVAANVKEYSQFLPLTSGVVSGGRSMDSQT HHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHH KMLKVGVDVLVATPGRLLEHLTLRNVDLSHVKYLTLDEADRMLDLGFLTDIQKLMEAIKQ HHHHHCCCEEEECHHHHHHHHHHCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHH KHQTLMFSATFSNKVKTLAKQILTTPKTLEISPQNSTAGKVKQQVYWVSETRKNELLSEL HHHEEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHEEHHHHHHHHHHHHH IGVKNWKQVLVFAGTKESANLLAKELQLDGIKTAVCHGDKTQGARNQAIQKFTEGSVRVL HCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEE VATDVAARGLDIPDLPYVVNFHLPFLAEDYIHRIGRTARAGKSGTAVSLVSPKDEQFLDN EEECHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHCCCCCCCEEEEECCCHHHHHHH IETLIGRKFERIVYPGYEIDSSLPGYYEQSSDKPLKKSRYKATQERNKMLEIQRAKNTPA HHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH AIRREKNKNKKQR HHHHHHCCCCCCC >Mature Secondary Structure SVDAIGLSAELLKAVKACGYKNLTPIQQQAIPIIRSGSDLLASAQTGTGKTAAFTLPIL CCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCEECCCHHHEECCCCCCCCEEEHHHHH DILAKNANEKPTTNTTIKALILTPTRELAAQVAANVKEYSQFLPLTSGVVSGGRSMDSQT HHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHH KMLKVGVDVLVATPGRLLEHLTLRNVDLSHVKYLTLDEADRMLDLGFLTDIQKLMEAIKQ HHHHHCCCEEEECHHHHHHHHHHCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHH KHQTLMFSATFSNKVKTLAKQILTTPKTLEISPQNSTAGKVKQQVYWVSETRKNELLSEL HHHEEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHEEHHHHHHHHHHHHH IGVKNWKQVLVFAGTKESANLLAKELQLDGIKTAVCHGDKTQGARNQAIQKFTEGSVRVL HCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEE VATDVAARGLDIPDLPYVVNFHLPFLAEDYIHRIGRTARAGKSGTAVSLVSPKDEQFLDN EEECHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHCCCCCCCEEEEECCCHHHHHHH IETLIGRKFERIVYPGYEIDSSLPGYYEQSSDKPLKKSRYKATQERNKMLEIQRAKNTPA HHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH AIRREKNKNKKQR HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]