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The map label for this gene is 119945502

Identifier: 119945502

GI number: 119945502

Start: 2191724

End: 2192143

Strand: Reverse

Name: 119945502

Synonym: Ping_1806

Alternate gene names: NA

Gene position: 2192143-2191724 (Counterclockwise)

Preceding gene: 119945503

Following gene: 119945497

Centisome position: 48.08

GC content: 35.24

Gene sequence:

>420_bases
ATGAACATAGTACCAAGAAGCCAATGGTTAAGCCCAGAACATGTTTTCGACGATTTTTTTGCCTTAAACAAACTAAAAGG
CAAAGAGGGTTATTTTGAACCTCGCGTAGATATTATTGAAAAAGATGATCAATACGTCTTCGTCGCTGAGCTACCCGGTG
TAGATAAAGAAGATATCAATGTCCAGCTGCAGGATGGTTTATTGACCATTGAAGCTAAGGTGCATGAAGAAAAAGAATCT
GAAGTAGATAATGTTATCAAAAAAGAAATAAGAAGTGGTTTCTTTAGCCGCAGTATTAATGTGGGAAAAAATATTAAAGA
AGAAGAAATAAAAGCCGAACTAGTAAATGGTTTATTGAAACTTACAGCCCCAAAAGCAAAACCAGCTGGTCACGAAGTTC
ACAAAATTGAAATATCATAA

Upstream 100 bases:

>100_bases
TTATTTAGCTTGTCAGGTTTTTTTTCCGGCATCTATTCTATACTTTAATCGAGAAAATAATTTTCTCGGGATGTTAGCAC
TATTTTTTGAGGAGGAAATT

Downstream 100 bases:

>100_bases
AACTTATTGATGCCAGTAAAAAGAGGTTAGGGCTTTGTAGACCTAACCTCTTTTTTTTGTTGGCTGTTTTTTTAACCCTA
TCTTTGCTTTATCCTCAAAC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNIVPRSQWLSPEHVFDDFFALNKLKGKEGYFEPRVDIIEKDDQYVFVAELPGVDKEDINVQLQDGLLTIEAKVHEEKES
EVDNVIKKEIRSGFFSRSINVGKNIKEEEIKAELVNGLLKLTAPKAKPAGHEVHKIEIS

Sequences:

>Translated_139_residues
MNIVPRSQWLSPEHVFDDFFALNKLKGKEGYFEPRVDIIEKDDQYVFVAELPGVDKEDINVQLQDGLLTIEAKVHEEKES
EVDNVIKKEIRSGFFSRSINVGKNIKEEEIKAELVNGLLKLTAPKAKPAGHEVHKIEIS
>Mature_139_residues
MNIVPRSQWLSPEHVFDDFFALNKLKGKEGYFEPRVDIIEKDDQYVFVAELPGVDKEDINVQLQDGLLTIEAKVHEEKES
EVDNVIKKEIRSGFFSRSINVGKNIKEEEIKAELVNGLLKLTAPKAKPAGHEVHKIEIS

Specific function: Probable chaperone [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15827; Mature: 15827

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVPRSQWLSPEHVFDDFFALNKLKGKEGYFEPRVDIIEKDDQYVFVAELPGVDKEDIN
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCE
VQLQDGLLTIEAKVHEEKESEVDNVIKKEIRSGFFSRSINVGKNIKEEEIKAELVNGLLK
EEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LTAPKAKPAGHEVHKIEIS
HCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MNIVPRSQWLSPEHVFDDFFALNKLKGKEGYFEPRVDIIEKDDQYVFVAELPGVDKEDIN
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCE
VQLQDGLLTIEAKVHEEKESEVDNVIKKEIRSGFFSRSINVGKNIKEEEIKAELVNGLLK
EEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LTAPKAKPAGHEVHKIEIS
HCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA