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The map label for this gene is ygjR [H]

Identifier: 119945505

GI number: 119945505

Start: 2194960

End: 2195934

Strand: Reverse

Name: ygjR [H]

Synonym: Ping_1809

Alternate gene names: 119945505

Gene position: 2195934-2194960 (Counterclockwise)

Preceding gene: 119945509

Following gene: 119945503

Centisome position: 48.16

GC content: 38.26

Gene sequence:

>975_bases
ATGATTAATTTTGCCGTTATCGGTAGCAACTGGATAACTGAAAAGTTTATTAACGGGACATTAGTTAATAATGACCTGAA
CTTAACAGCCGTTTATTCCCGCACCTTAAAGACAGCACAAAACTTTGCCGGTAAATTTAACGTGCAACAGTGCTTTGATG
ACCTGCAGGCATTAAGTCAATGTGACGATATTGATGCGGTTTATATTGCCAGCCCGAATGCTTTACACTTTGAACATGCT
TTATTGATGTTGGAAAAGGGTAAACATGTTATTTGTGAAAAACCCTTAGCGTCCAATATCCAGGAGGTTGATGCACTTTA
TCAAGCGGCGACTGCAAACAATGTTATTTTGTTTGAAGCCTATAAGACAGCTTATTTGCCAAATTTTGCACAAATAAAAA
ATAATCTCTCTAAAATCGGTAAATTACGTAAAGCGCATATTAATTACTGCCAATATTCCTCCCGTTACCAAAAATATCTC
AATGGTGAAAATCCAAATACCTTTAACCCGTATTTTTCTAACGGCTCAATTATGGATATTGGTTATTACTGCGTGGCTTT
TACTATTGCCCTGTTTGGTAAACCGCAGCATATTCAAGCCGATGCGGTTTTACTCAATTCCGGCGTAGATGGTTGTGGCG
CTGTTCTGCTAAACTATGGCGATTTTTCGGTCACTATTGACCATTCAAAAATAAGTCGTTCAGACTTACTAAGCGAAATA
CAAGGTGAACAAGGTAATTTATTGATTAAACAGGTCTCTGAATGTACAGAGGTCACTTTAATAACTGACATTGTCACCGA
TTTAACGCAGGATCAGCACGAAAACAGCATGAGCTACGAAGCCAGTTTTTTTGCCCAACAAATTAAACAGGGAAAAATGG
ATTTACAAAGCGTTGAACGCTCTAAAATAACCTCAGCTGTTATTACCGAAATTCGCCGTTTAACGGGTGTTAAATTCCCG
GCGGACAATCAATAG

Upstream 100 bases:

>100_bases
TTCATAATTATCTTTTTAGTTGTGTTATTTATATCATCATTATGGCCTGCTGATCTTTTGCGTTATATTGAGCTTAATGA
CCCTCTATTAGGATGATAAC

Downstream 100 bases:

>100_bases
TTGCAGAGACTGGAAAACTATATCCCGACATAAAAAACTAAAATATGCCGAGCATTTAGCCGTTTGTGGGTGCGAACTAT
CCAGGTCAATATTTTACATA

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MINFAVIGSNWITEKFINGTLVNNDLNLTAVYSRTLKTAQNFAGKFNVQQCFDDLQALSQCDDIDAVYIASPNALHFEHA
LLMLEKGKHVICEKPLASNIQEVDALYQAATANNVILFEAYKTAYLPNFAQIKNNLSKIGKLRKAHINYCQYSSRYQKYL
NGENPNTFNPYFSNGSIMDIGYYCVAFTIALFGKPQHIQADAVLLNSGVDGCGAVLLNYGDFSVTIDHSKISRSDLLSEI
QGEQGNLLIKQVSECTEVTLITDIVTDLTQDQHENSMSYEASFFAQQIKQGKMDLQSVERSKITSAVITEIRRLTGVKFP
ADNQ

Sequences:

>Translated_324_residues
MINFAVIGSNWITEKFINGTLVNNDLNLTAVYSRTLKTAQNFAGKFNVQQCFDDLQALSQCDDIDAVYIASPNALHFEHA
LLMLEKGKHVICEKPLASNIQEVDALYQAATANNVILFEAYKTAYLPNFAQIKNNLSKIGKLRKAHINYCQYSSRYQKYL
NGENPNTFNPYFSNGSIMDIGYYCVAFTIALFGKPQHIQADAVLLNSGVDGCGAVLLNYGDFSVTIDHSKISRSDLLSEI
QGEQGNLLIKQVSECTEVTLITDIVTDLTQDQHENSMSYEASFFAQQIKQGKMDLQSVERSKITSAVITEIRRLTGVKFP
ADNQ
>Mature_324_residues
MINFAVIGSNWITEKFINGTLVNNDLNLTAVYSRTLKTAQNFAGKFNVQQCFDDLQALSQCDDIDAVYIASPNALHFEHA
LLMLEKGKHVICEKPLASNIQEVDALYQAATANNVILFEAYKTAYLPNFAQIKNNLSKIGKLRKAHINYCQYSSRYQKYL
NGENPNTFNPYFSNGSIMDIGYYCVAFTIALFGKPQHIQADAVLLNSGVDGCGAVLLNYGDFSVTIDHSKISRSDLLSEI
QGEQGNLLIKQVSECTEVTLITDIVTDLTQDQHENSMSYEASFFAQQIKQGKMDLQSVERSKITSAVITEIRRLTGVKFP
ADNQ

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=349, Percent_Identity=25.5014326647564, Blast_Score=110, Evalue=1e-24,
Organism=Escherichia coli, GI145693182, Length=325, Percent_Identity=56.9230769230769, Blast_Score=383, Evalue=1e-107,
Organism=Escherichia coli, GI1787574, Length=195, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24581117, Length=343, Percent_Identity=27.9883381924198, Blast_Score=118, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24581115, Length=226, Percent_Identity=24.7787610619469, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24584727, Length=132, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36116; Mature: 36116

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFAVIGSNWITEKFINGTLVNNDLNLTAVYSRTLKTAQNFAGKFNVQQCFDDLQALSQ
CEEEEEECCCHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
CDDIDAVYIASPNALHFEHALLMLEKGKHVICEKPLASNIQEVDALYQAATANNVILFEA
CCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHCCCCEEEEEE
YKTAYLPNFAQIKNNLSKIGKLRKAHINYCQYSSRYQKYLNGENPNTFNPYFSNGSIMDI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEH
GYYCVAFTIALFGKPQHIQADAVLLNSGVDGCGAVLLNYGDFSVTIDHSKISRSDLLSEI
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHEEECCCEEEEEEHHHCCHHHHHHHH
QGEQGNLLIKQVSECTEVTLITDIVTDLTQDQHENSMSYEASFFAQQIKQGKMDLQSVER
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
SKITSAVITEIRRLTGVKFPADNQ
HHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MINFAVIGSNWITEKFINGTLVNNDLNLTAVYSRTLKTAQNFAGKFNVQQCFDDLQALSQ
CEEEEEECCCHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
CDDIDAVYIASPNALHFEHALLMLEKGKHVICEKPLASNIQEVDALYQAATANNVILFEA
CCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHCCCCEEEEEE
YKTAYLPNFAQIKNNLSKIGKLRKAHINYCQYSSRYQKYLNGENPNTFNPYFSNGSIMDI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEH
GYYCVAFTIALFGKPQHIQADAVLLNSGVDGCGAVLLNYGDFSVTIDHSKISRSDLLSEI
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHEEECCCEEEEEEHHHCCHHHHHHHH
QGEQGNLLIKQVSECTEVTLITDIVTDLTQDQHENSMSYEASFFAQQIKQGKMDLQSVER
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
SKITSAVITEIRRLTGVKFPADNQ
HHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]