Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945484
Identifier: 119945484
GI number: 119945484
Start: 2170101
End: 2170736
Strand: Reverse
Name: 119945484
Synonym: Ping_1785
Alternate gene names: NA
Gene position: 2170736-2170101 (Counterclockwise)
Preceding gene: 119945485
Following gene: 119945482
Centisome position: 47.61
GC content: 47.8
Gene sequence:
>636_bases ATGTTGCGGATAGCTCTTATCAGTTGGGTCACAATTACCACGTTACTATTGGCGGGAAATGCTATGGCTGTTGAGGAAGC AAAATACAATGTACTTCGCGAAGAAGACGGGTTCGAACTTCGCGAGTACGAGTCCCATATTATCGCTGAAACCACAGTAG ATGGAGCGTTTGAAGATGCTGGTAGCGAAGCATTTGGCCGCCTGTTCAAGTATATTTCTGGCAACAACACACAGCAACAA AAAGTGGCGATGACATCGCCTGTTGGACAAGAGCCATCGAGCCAGAAAATTGAGATGACATCGCCGGTAGGCCAGCAGAA GCAAGATGAAAAATGGGTTGTCAGTTTCATGATGCCAGCGTCATTCGAGTTGGAAACGACTCCTGAGCCGAAGGATCCAA ACGTGTCTATTCGCGAGGTTCCGGCACGTCTCATTGCTGTGGTACGTTATTCAGGTTTTTGGAGCGAAAAGAATTACCTT CGCAATTTGGAAAAATTACAGAATTGGATAGAAAATAGTCGCTTGACTCCGGTAGGCGAACCGATTTGGGCACGGTACAA CCCACCGTTCATGCCTTGGTTCCTTCGTCGCAATGAAATCCTGGTGCCGGTTGCATCCCCAGAATCTGGCGATTGA
Upstream 100 bases:
>100_bases CTTGAAAAGTGATGCCTTCATATTTGGCTGCAGTGCAGGAAAAGGCGATTAGCTTTGGTTTAGGTCTAGAATGGCTGAGT CTAAAAAGGAAATCTTAATA
Downstream 100 bases:
>100_bases GCGTGGGGCAGTTGACGCCTAACAAGTCGTTGCAATGGATATTTGGCCCGCCACCTACTTTTAATGCCACAAATGCTTCT GAACTCAAGCATAAATGAAG
Product: SOUL heme-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLRIALISWVTITTLLLAGNAMAVEEAKYNVLREEDGFELREYESHIIAETTVDGAFEDAGSEAFGRLFKYISGNNTQQQ KVAMTSPVGQEPSSQKIEMTSPVGQQKQDEKWVVSFMMPASFELETTPEPKDPNVSIREVPARLIAVVRYSGFWSEKNYL RNLEKLQNWIENSRLTPVGEPIWARYNPPFMPWFLRRNEILVPVASPESGD
Sequences:
>Translated_211_residues MLRIALISWVTITTLLLAGNAMAVEEAKYNVLREEDGFELREYESHIIAETTVDGAFEDAGSEAFGRLFKYISGNNTQQQ KVAMTSPVGQEPSSQKIEMTSPVGQQKQDEKWVVSFMMPASFELETTPEPKDPNVSIREVPARLIAVVRYSGFWSEKNYL RNLEKLQNWIENSRLTPVGEPIWARYNPPFMPWFLRRNEILVPVASPESGD >Mature_211_residues MLRIALISWVTITTLLLAGNAMAVEEAKYNVLREEDGFELREYESHIIAETTVDGAFEDAGSEAFGRLFKYISGNNTQQQ KVAMTSPVGQEPSSQKIEMTSPVGQQKQDEKWVVSFMMPASFELETTPEPKDPNVSIREVPARLIAVVRYSGFWSEKNYL RNLEKLQNWIENSRLTPVGEPIWARYNPPFMPWFLRRNEILVPVASPESGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24001; Mature: 24001
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIALISWVTITTLLLAGNAMAVEEAKYNVLREEDGFELREYESHIIAETTVDGAFEDA CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCHHHC GSEAFGRLFKYISGNNTQQQKVAMTSPVGQEPSSQKIEMTSPVGQQKQDEKWVVSFMMPA CHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCC SFELETTPEPKDPNVSIREVPARLIAVVRYSGFWSEKNYLRNLEKLQNWIENSRLTPVGE CEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC PIWARYNPPFMPWFLRRNEILVPVASPESGD CCEECCCCCCCCCEECCCEEEEEECCCCCCC >Mature Secondary Structure MLRIALISWVTITTLLLAGNAMAVEEAKYNVLREEDGFELREYESHIIAETTVDGAFEDA CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCHHHC GSEAFGRLFKYISGNNTQQQKVAMTSPVGQEPSSQKIEMTSPVGQQKQDEKWVVSFMMPA CHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCC SFELETTPEPKDPNVSIREVPARLIAVVRYSGFWSEKNYLRNLEKLQNWIENSRLTPVGE CEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC PIWARYNPPFMPWFLRRNEILVPVASPESGD CCEECCCCCCCCCEECCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA