Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945482
Identifier: 119945482
GI number: 119945482
Start: 2167565
End: 2168029
Strand: Reverse
Name: 119945482
Synonym: Ping_1783
Alternate gene names: NA
Gene position: 2168029-2167565 (Counterclockwise)
Preceding gene: 119945484
Following gene: 119945478
Centisome position: 47.55
GC content: 44.3
Gene sequence:
>465_bases GTGACATATCATCCCGGCGCAAGTTCTTACTGCCTTTTTGACAATCCCGGCAAGACCCTTGAAACATTTTCTGGTCCTCT TTTTCCTGGAGGGGTGTTTAGTGGTTATTACCTTGCAGGAGATAGAGCCGCCAATTTTTCTTACGAGGATGAGAGAGATT TATATGATTCCACATCATATAAATCTCGCAACTCTGCGGAATTTAGGCGTAATGGTTATTATTTTACTGCAGATGCTTGG CCCTTGGGCAATCACAGTGAAAACGGTATGGCCTTGGCTGTGACCAGTATGAATCTAAGTTTTCTAGTGACAGAAGGAGA CTCCTCAATAGATCTCGGTCTGGATCATATTAGCAGAAGAAGCCGGCTGCTAAGGCTCTATGATGAAACATCAGGGATAG CTGTTGCAAATTTGATGGGCACAGTGGTAGTGATGGAGCTGCTGCGGGTGTGTAAAAATTTCTGA
Upstream 100 bases:
>100_bases GTCAATTTTTCCTTTGAAGCAAGTGCTCATAAACTTAATGCATTTGGTATGATGCGGCATTAATAAATAGACTGGAAGAC CAGACTAGCGCCTATGCGCA
Downstream 100 bases:
>100_bases CAGGTCTTAAATTGTCTAAAGTACAAACCTATTCAGGTACTGCGCGCCAGTAACTATTTAATGGCTTTATTGTTTATTAC TTTTATTGGTCAAAAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTYHPGASSYCLFDNPGKTLETFSGPLFPGGVFSGYYLAGDRAANFSYEDERDLYDSTSYKSRNSAEFRRNGYYFTADAW PLGNHSENGMALAVTSMNLSFLVTEGDSSIDLGLDHISRRSRLLRLYDETSGIAVANLMGTVVVMELLRVCKNF
Sequences:
>Translated_154_residues MTYHPGASSYCLFDNPGKTLETFSGPLFPGGVFSGYYLAGDRAANFSYEDERDLYDSTSYKSRNSAEFRRNGYYFTADAW PLGNHSENGMALAVTSMNLSFLVTEGDSSIDLGLDHISRRSRLLRLYDETSGIAVANLMGTVVVMELLRVCKNF >Mature_153_residues TYHPGASSYCLFDNPGKTLETFSGPLFPGGVFSGYYLAGDRAANFSYEDERDLYDSTSYKSRNSAEFRRNGYYFTADAWP LGNHSENGMALAVTSMNLSFLVTEGDSSIDLGLDHISRRSRLLRLYDETSGIAVANLMGTVVVMELLRVCKNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17104; Mature: 16973
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYHPGASSYCLFDNPGKTLETFSGPLFPGGVFSGYYLAGDRAANFSYEDERDLYDSTSY CCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC KSRNSAEFRRNGYYFTADAWPLGNHSENGMALAVTSMNLSFLVTEGDSSIDLGLDHISRR CCCCCCCHHHCCEEEEECCCCCCCCCCCCEEEEEEECCEEEEEECCCCCEECCHHHHHHH SRLLRLYDETSGIAVANLMGTVVVMELLRVCKNF HHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TYHPGASSYCLFDNPGKTLETFSGPLFPGGVFSGYYLAGDRAANFSYEDERDLYDSTSY CCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC KSRNSAEFRRNGYYFTADAWPLGNHSENGMALAVTSMNLSFLVTEGDSSIDLGLDHISRR CCCCCCCHHHCCEEEEECCCCCCCCCCCCEEEEEEECCEEEEEECCCCCEECCHHHHHHH SRLLRLYDETSGIAVANLMGTVVVMELLRVCKNF HHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA