Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is ptxB [H]
Identifier: 119945472
GI number: 119945472
Start: 2151308
End: 2152162
Strand: Reverse
Name: ptxB [H]
Synonym: Ping_1770
Alternate gene names: 119945472
Gene position: 2152162-2151308 (Counterclockwise)
Preceding gene: 119945476
Following gene: 119945471
Centisome position: 47.2
GC content: 40.7
Gene sequence:
>855_bases ATGAAACTAACACATTTATTATCGGCCGGTCTTTTAAGTTTATTTTCGACCTGTGCATTAAGTACCACTTTTACTTTTAC AGCTATTCCCGATGCCGATGAAAGCAATCTTCGTACACGTTTTGAAAAAGTAGCCGATTATTTATCTAAGCAATTGGACG TTGAAGTCAAGTATATTCCGGTAAAATCTTATTCTGCTGCGATCACGGCGTTTCGTAATAACCAGGTACAACTTGCTTGG TTTGGTGGTTTATCCGGTGTGCAAGCGCGTGGTTTGGTACCCGGTTCTGAGGCCATTGCGCAAGGGTTTGAGGATCAATC TTTTAAGAGTTATTTGATTGCACATCATTCTGTCGACATAAAATTGTCTGATGATTTTCCGGTACTTGATAATTATACTT TTACCTTTGGCTCTAAGGGTTCAACGTCAGGCCGTTTGATGCCGCAGTTTTTTATTGAGCAAAATTTAGGTAAACCCGTC GATCAAATTTTTAAACGCATCGGTTTCTCTGGTGATCATAGCCGTACCATCAGCCAAGTTGAAGCAGGTGTTTATCAAGT AGGCGCGGTAAATTATAAAGTGTGGGACACCGCTGTTGAAAAAGGTGAGGTTGATACCAGCAAGGTGAAAGTCATTTGGG AAAGCCCTACCTATCCAGATTATCAATGGACAGTACGTTCGGGCGTAGACAGTGATTTTGGTGCAGGCTTTAAAGAGAAG CTGACTAAAGCATTAATTGGGATGACCGATAAGGATTTATTAGCCAGTTTTCCGCGTACATCCTTTGTTCCAGCCAAAAA TAGCGATTATGAACCGATTGAGCGTGTTGCTAAAAAAATTGGAATGATTGATTAA
Upstream 100 bases:
>100_bases ATTCAGAGCTGTTTCCACAAAGTGACCACAATGAAGCGTTGCATCGATTATCAGGTAAAGTTAAAATGCCCGGATTAACT ACCCTCCCCCTAGGATTGAG
Downstream 100 bases:
>100_bases TGTTGTCGTTGGTTGATATTGATTTAGGTTATAACCAACAGATTGTTTTACCTAAAATTAATTTATTATTTAACAAAAAT GAACATGTGGCTATTTTAGG
Product: ABC phosphonate transporter periplasmic phosphonate-binding protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKLTHLLSAGLLSLFSTCALSTTFTFTAIPDADESNLRTRFEKVADYLSKQLDVEVKYIPVKSYSAAITAFRNNQVQLAW FGGLSGVQARGLVPGSEAIAQGFEDQSFKSYLIAHHSVDIKLSDDFPVLDNYTFTFGSKGSTSGRLMPQFFIEQNLGKPV DQIFKRIGFSGDHSRTISQVEAGVYQVGAVNYKVWDTAVEKGEVDTSKVKVIWESPTYPDYQWTVRSGVDSDFGAGFKEK LTKALIGMTDKDLLASFPRTSFVPAKNSDYEPIERVAKKIGMID
Sequences:
>Translated_284_residues MKLTHLLSAGLLSLFSTCALSTTFTFTAIPDADESNLRTRFEKVADYLSKQLDVEVKYIPVKSYSAAITAFRNNQVQLAW FGGLSGVQARGLVPGSEAIAQGFEDQSFKSYLIAHHSVDIKLSDDFPVLDNYTFTFGSKGSTSGRLMPQFFIEQNLGKPV DQIFKRIGFSGDHSRTISQVEAGVYQVGAVNYKVWDTAVEKGEVDTSKVKVIWESPTYPDYQWTVRSGVDSDFGAGFKEK LTKALIGMTDKDLLASFPRTSFVPAKNSDYEPIERVAKKIGMID >Mature_284_residues MKLTHLLSAGLLSLFSTCALSTTFTFTAIPDADESNLRTRFEKVADYLSKQLDVEVKYIPVKSYSAAITAFRNNQVQLAW FGGLSGVQARGLVPGSEAIAQGFEDQSFKSYLIAHHSVDIKLSDDFPVLDNYTFTFGSKGSTSGRLMPQFFIEQNLGKPV DQIFKRIGFSGDHSRTISQVEAGVYQVGAVNYKVWDTAVEKGEVDTSKVKVIWESPTYPDYQWTVRSGVDSDFGAGFKEK LTKALIGMTDKDLLASFPRTSFVPAKNSDYEPIERVAKKIGMID
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 31436; Mature: 31436
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTHLLSAGLLSLFSTCALSTTFTFTAIPDADESNLRTRFEKVADYLSKQLDVEVKYIP CCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEE VKSYSAAITAFRNNQVQLAWFGGLSGVQARGLVPGSEAIAQGFEDQSFKSYLIAHHSVDI ECCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHEEEEEEEEE KLSDDFPVLDNYTFTFGSKGSTSGRLMPQFFIEQNLGKPVDQIFKRIGFSGDHSRTISQV EECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHH EAGVYQVGAVNYKVWDTAVEKGEVDTSKVKVIWESPTYPDYQWTVRSGVDSDFGAGFKEK HHCCEEECCEEEEEHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHH LTKALIGMTDKDLLASFPRTSFVPAKNSDYEPIERVAKKIGMID HHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKLTHLLSAGLLSLFSTCALSTTFTFTAIPDADESNLRTRFEKVADYLSKQLDVEVKYIP CCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEE VKSYSAAITAFRNNQVQLAWFGGLSGVQARGLVPGSEAIAQGFEDQSFKSYLIAHHSVDI ECCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHEEEEEEEEE KLSDDFPVLDNYTFTFGSKGSTSGRLMPQFFIEQNLGKPVDQIFKRIGFSGDHSRTISQV EECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHH EAGVYQVGAVNYKVWDTAVEKGEVDTSKVKVIWESPTYPDYQWTVRSGVDSDFGAGFKEK HHCCEEECCEEEEEHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHH LTKALIGMTDKDLLASFPRTSFVPAKNSDYEPIERVAKKIGMID HHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]