Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945476
Identifier: 119945476
GI number: 119945476
Start: 2155963
End: 2156448
Strand: Reverse
Name: 119945476
Synonym: Ping_1774
Alternate gene names: NA
Gene position: 2156448-2155963 (Counterclockwise)
Preceding gene: 119945478
Following gene: 119945472
Centisome position: 47.29
GC content: 33.74
Gene sequence:
>486_bases ATGGCTGATATGTCTCTTTGGAAGTTTATTGCAATATTATGTGTTGTTGGATTAAGTGGATGTACTCAAATACAACAATT ACAAGATCTGGAAGTGAGTTTAATTAATATAGAGCCAACAACGGCGGCGGGGTTATCCCCTCGTTTTAATGTGCACTTAT TAGTCTTAAATCCGAATCCTCAAGATTTAGAAATTGAAGGCATCATTTTACGCCTGGATATTAATGATAAAAAGATTTTA TCCGGTGTGTCCAGTCAAATCCCTACATTAAAGGGATACAGTGAAACGCCCATCAAAATACAAACAGCTGTTTCACTATT TGATCTGTTTAAATTATTAACCTCTCTAAGTCAACATTCAGGTGATGATATTAAATACCAACTGCAAACAAAAATAGATC CCAAGGGATTTATTGCCTTTAATCTAAGCAAAGAGGGATTCTTAAATGAAAATCTTTTACAAGGATTAAGCAATCAATCT AGATAA
Upstream 100 bases:
>100_bases AAACATAAATGTTGGTTAATATTTTCTGAACTTATTTTTATTTCAAAAAATACAATCTATATTATTTTGCTATTATTATT TATTATTTATTATTAATGGA
Downstream 100 bases:
>100_bases CACAAATCACCAACAGAAAGAACTAGCGAACCACTTCAATTCGCACTTTAATCACGCCTGAGTCGAGAGAACCAATAAGA CTGAATGCGGAGCGTAACAG
Product: water stress/hypersensitive response protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MADMSLWKFIAILCVVGLSGCTQIQQLQDLEVSLINIEPTTAAGLSPRFNVHLLVLNPNPQDLEIEGIILRLDINDKKIL SGVSSQIPTLKGYSETPIKIQTAVSLFDLFKLLTSLSQHSGDDIKYQLQTKIDPKGFIAFNLSKEGFLNENLLQGLSNQS R
Sequences:
>Translated_161_residues MADMSLWKFIAILCVVGLSGCTQIQQLQDLEVSLINIEPTTAAGLSPRFNVHLLVLNPNPQDLEIEGIILRLDINDKKIL SGVSSQIPTLKGYSETPIKIQTAVSLFDLFKLLTSLSQHSGDDIKYQLQTKIDPKGFIAFNLSKEGFLNENLLQGLSNQS R >Mature_160_residues ADMSLWKFIAILCVVGLSGCTQIQQLQDLEVSLINIEPTTAAGLSPRFNVHLLVLNPNPQDLEIEGIILRLDINDKKILS GVSSQIPTLKGYSETPIKIQTAVSLFDLFKLLTSLSQHSGDDIKYQLQTKIDPKGFIAFNLSKEGFLNENLLQGLSNQSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17797; Mature: 17666
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMSLWKFIAILCVVGLSGCTQIQQLQDLEVSLINIEPTTAAGLSPRFNVHLLVLNPNP CCCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC QDLEIEGIILRLDINDKKILSGVSSQIPTLKGYSETPIKIQTAVSLFDLFKLLTSLSQHS CCEEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCC GDDIKYQLQTKIDPKGFIAFNLSKEGFLNENLLQGLSNQSR CCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure ADMSLWKFIAILCVVGLSGCTQIQQLQDLEVSLINIEPTTAAGLSPRFNVHLLVLNPNP CCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC QDLEIEGIILRLDINDKKILSGVSSQIPTLKGYSETPIKIQTAVSLFDLFKLLTSLSQHS CCEEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCC GDDIKYQLQTKIDPKGFIAFNLSKEGFLNENLLQGLSNQSR CCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA