Click here to switch to the map view.

The map label for this gene is phnC1 [H]

Identifier: 119945471

GI number: 119945471

Start: 2150631

End: 2151308

Strand: Reverse

Name: phnC1 [H]

Synonym: Ping_1769

Alternate gene names: 119945471

Gene position: 2151308-2150631 (Counterclockwise)

Preceding gene: 119945472

Following gene: 119945470

Centisome position: 47.18

GC content: 41.0

Gene sequence:

>678_bases
ATGTTGTCGTTGGTTGATATTGATTTAGGTTATAACCAACAGATTGTTTTACCTAAAATTAATTTATTATTTAACAAAAA
TGAACATGTGGCTATTTTAGGTCCTTCCGGCGTGGGTAAAACCACGCTGTTACATCACCTATATCAACAACTGTCCGCAC
AAACCTGTTTATGTTCTCAAGCCAAAGGACTGGTCGATAACTTGTCGATTTATCATAACGTGTTTATTGGTGGGCTAGCG
CGCTATTCTAGCTGGTATAATTTGACTAATTTGTTATGGCCGTTTAACAAGCCGCAACAACACATTAGCGCTATTTGCCA
GCAGCTTGAGTTAACTGCGCCATTGCACCAGAAAGTCAGCGAGTTGTCTGGCGGTCAACGTCAGCGTGTTGCTATCGCCA
GAGCGTTATTTCAGCGGCAGCCAGTATTTATGGGCGATGAACCTTTTTCTGCACTAGATCCATTAATGGGCTTACGACTG
TTAAATTTAATTAAGCAAGCGCATCCGAGTGTTATTTGTGTGTTGCATGATGCCGAATTAGCGTTAGCACACTTTGAGCG
CATTATTGTGATTAGCGATGGTAAAGTCGCCTTAGATGAGAAAGCCAATCAATTAACGCTGGCTCATTTATCTCAGCATT
ATACATTGGCAGATACTGTCAAAAATGCAGTGATATGA

Upstream 100 bases:

>100_bases
ATTTATTAGCCAGTTTTCCGCGTACATCCTTTGTTCCAGCCAAAAATAGCGATTATGAACCGATTGAGCGTGTTGCTAAA
AAAATTGGAATGATTGATTA

Downstream 100 bases:

>100_bases
AGATATTAATACTAAAAAACAACTTTTTTATAACCCACTTTTCCCTATTCAGTCACCACCCTTTCTATTATGCCTAAAAT
CATCACCGTTAGTGGATTCT

Product: phosphonate ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLSLVDIDLGYNQQIVLPKINLLFNKNEHVAILGPSGVGKTTLLHHLYQQLSAQTCLCSQAKGLVDNLSIYHNVFIGGLA
RYSSWYNLTNLLWPFNKPQQHISAICQQLELTAPLHQKVSELSGGQRQRVAIARALFQRQPVFMGDEPFSALDPLMGLRL
LNLIKQAHPSVICVLHDAELALAHFERIIVISDGKVALDEKANQLTLAHLSQHYTLADTVKNAVI

Sequences:

>Translated_225_residues
MLSLVDIDLGYNQQIVLPKINLLFNKNEHVAILGPSGVGKTTLLHHLYQQLSAQTCLCSQAKGLVDNLSIYHNVFIGGLA
RYSSWYNLTNLLWPFNKPQQHISAICQQLELTAPLHQKVSELSGGQRQRVAIARALFQRQPVFMGDEPFSALDPLMGLRL
LNLIKQAHPSVICVLHDAELALAHFERIIVISDGKVALDEKANQLTLAHLSQHYTLADTVKNAVI
>Mature_225_residues
MLSLVDIDLGYNQQIVLPKINLLFNKNEHVAILGPSGVGKTTLLHHLYQQLSAQTCLCSQAKGLVDNLSIYHNVFIGGLA
RYSSWYNLTNLLWPFNKPQQHISAICQQLELTAPLHQKVSELSGGQRQRVAIARALFQRQPVFMGDEPFSALDPLMGLRL
LNLIKQAHPSVICVLHDAELALAHFERIIVISDGKVALDEKANQLTLAHLSQHYTLADTVKNAVI

Specific function: Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system [H]

COG id: COG3638

COG function: function code P; ABC-type phosphate/phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI215820660, Length=196, Percent_Identity=25.5102040816327, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI20143975, Length=196, Percent_Identity=25.5102040816327, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1790544, Length=229, Percent_Identity=31.8777292576419, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1786253, Length=231, Percent_Identity=32.4675324675325, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1788225, Length=229, Percent_Identity=32.3144104803493, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1787370, Length=218, Percent_Identity=28.4403669724771, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1789672, Length=243, Percent_Identity=26.3374485596708, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=28.6363636363636, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787164, Length=202, Percent_Identity=32.6732673267327, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787105, Length=233, Percent_Identity=33.4763948497854, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788761, Length=233, Percent_Identity=26.1802575107296, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787712, Length=203, Percent_Identity=31.5270935960591, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=219, Percent_Identity=26.4840182648402, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786563, Length=218, Percent_Identity=30.2752293577982, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081709, Length=222, Percent_Identity=27.4774774774775, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787089, Length=232, Percent_Identity=28.448275862069, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790162, Length=209, Percent_Identity=30.1435406698565, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1788450, Length=214, Percent_Identity=26.6355140186916, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786703, Length=217, Percent_Identity=26.7281105990783, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87081834, Length=215, Percent_Identity=29.7674418604651, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790739, Length=212, Percent_Identity=25, Blast_Score=64, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17569143, Length=234, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=237, Percent_Identity=28.2700421940928, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85724864, Length=211, Percent_Identity=28.9099526066351, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24580555, Length=211, Percent_Identity=28.9099526066351, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI85816269, Length=211, Percent_Identity=28.9099526066351, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24580553, Length=211, Percent_Identity=28.9099526066351, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161076682, Length=209, Percent_Identity=27.7511961722488, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161076684, Length=209, Percent_Identity=27.7511961722488, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581617, Length=209, Percent_Identity=27.7511961722488, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581615, Length=209, Percent_Identity=27.7511961722488, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI85724858, Length=214, Percent_Identity=27.5700934579439, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI85724856, Length=214, Percent_Identity=27.5700934579439, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580547, Length=214, Percent_Identity=27.5700934579439, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580551, Length=214, Percent_Identity=27.5700934579439, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580549, Length=214, Percent_Identity=27.5700934579439, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580545, Length=214, Percent_Identity=27.5700934579439, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR012693
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.28 [H]

Molecular weight: Translated: 25013; Mature: 25013

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLVDIDLGYNQQIVLPKINLLFNKNEHVAILGPSGVGKTTLLHHLYQQLSAQTCLCSQ
CCEEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
AKGLVDNLSIYHNVFIGGLARYSSWYNLTNLLWPFNKPQQHISAICQQLELTAPLHQKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
ELSGGQRQRVAIARALFQRQPVFMGDEPFSALDPLMGLRLLNLIKQAHPSVICVLHDAEL
HHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH
ALAHFERIIVISDGKVALDEKANQLTLAHLSQHYTLADTVKNAVI
HHHHHCEEEEEECCCEEECCCCCEEHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MLSLVDIDLGYNQQIVLPKINLLFNKNEHVAILGPSGVGKTTLLHHLYQQLSAQTCLCSQ
CCEEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
AKGLVDNLSIYHNVFIGGLARYSSWYNLTNLLWPFNKPQQHISAICQQLELTAPLHQKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
ELSGGQRQRVAIARALFQRQPVFMGDEPFSALDPLMGLRLLNLIKQAHPSVICVLHDAEL
HHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH
ALAHFERIIVISDGKVALDEKANQLTLAHLSQHYTLADTVKNAVI
HHHHHCEEEEEECCCEEECCCCCEEHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]