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The map label for this gene is rodZ [H]

Identifier: 119944922

GI number: 119944922

Start: 1456803

End: 1457930

Strand: Direct

Name: rodZ [H]

Synonym: Ping_1167

Alternate gene names: 119944922

Gene position: 1456803-1457930 (Clockwise)

Preceding gene: 119944921

Following gene: 119944923

Centisome position: 31.95

GC content: 43.26

Gene sequence:

>1128_bases
ATGAATAACGACACACCTCAAATTGTTACCCCACTGGGTCTCGCATTGCATAATGCCAGACTAAAAGCGTCATTATCAGT
CGAACAGGTTGCTAATCTTTTGAATTTAAAGGAAAGTGTGGTGAGAGAGCTGGAAGATGATATCTCTGCTTTGATTGAAA
GTGGTAAATATGCCCCTATTTATCTACGTGGATACCTTGCTAACTATGCAAAATTAGTCGCTTTAAAATCCTTGAATGAA
TTTGTTGAATACCAACAATTTTCCAAACATCAGGCGCGGGACACGAGTCTTAGAGCCACGGCTAGTATGGCGCCCGCTGG
CAAAAAAAGATTAATTCCCCGGTGGCTTTTACTTGCTTTATTGTTAGTCGCGATACTCGCTATAGTGTTCGCTAAGCAGC
CAGATTTATTTTTCGCGGGGGAAGCAGCGACTAAAGTCAGCGCAGAAAGTAGCGAAAATATTGAAAATAAACCTTTCAAT
CCGGTTGCTATCAATAACGAGGGTTCGCCTGCATTAACAGAGACAACTGTGGGCGCAGCCGTTGATGAAACCATCAGCGA
GGCAGTCGTTGATACAACCATCGGAGAGGCAGTCGTTGATACAACCGTCAGCGAGGCAGCTGTTGATGAAACCATCGGTG
AGGCAGTCGTTGATACAACCGTCAGCGAGGCAGTCGTTGATACAACCGTCAGCGAGGCCGTCGTTGGTACAATCGTCAGC
AAGGCAGTCGTTGATACAACCATCAGCGAGGCAGCCGTTGATAAAAATATCAACGAGACTGTCATTGAAAGCACAGTCAA
TCAAACGAGCAGTGCAAATAAAATAAATACAGAGAATATAAGTGTTAAGCTTGAAAATAATGAGCAGCTTGAGTCGCCAC
CAACGGCTATTAGTGAGTCTCTTTATTTATCTTTTTCAGCAGATTGTTGGACTGAAATAGTTGATGCAACGGGTGAACGT
TTAGCTTTTGGTCTTTACAAACAGGATGATATTTTGTCAATCGACGGAATCGCGCCATTTGAAATAAAATTAGGTGCACC
AAGCGCTGTTGTAGTAAAATATCAAGGAAAAAGAATCGAGCCTGATTTTACCGCGGGACAAACGCTGCAGTTTTCTATTC
CAGAGTAA

Upstream 100 bases:

>100_bases
GCGACCGGACAACATGCAAATATGAATAAATATGCCGGAATATTATTAGAAAAATTTCCCGAATCCCATCAAGCACTAGA
CTATTTAAATCATGGATACT

Downstream 100 bases:

>100_bases
GTGTTGGTTTGAACAGAAAAAATTTGCATAGTAAACCTATCCCTATCCCTATCCCCAATCCTAAACCAGCTAACGACGTA
GCAGCAGGTCTTTTATGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNNDTPQIVTPLGLALHNARLKASLSVEQVANLLNLKESVVRELEDDISALIESGKYAPIYLRGYLANYAKLVALKSLNE
FVEYQQFSKHQARDTSLRATASMAPAGKKRLIPRWLLLALLLVAILAIVFAKQPDLFFAGEAATKVSAESSENIENKPFN
PVAINNEGSPALTETTVGAAVDETISEAVVDTTIGEAVVDTTVSEAAVDETIGEAVVDTTVSEAVVDTTVSEAVVGTIVS
KAVVDTTISEAAVDKNINETVIESTVNQTSSANKINTENISVKLENNEQLESPPTAISESLYLSFSADCWTEIVDATGER
LAFGLYKQDDILSIDGIAPFEIKLGAPSAVVVKYQGKRIEPDFTAGQTLQFSIPE

Sequences:

>Translated_375_residues
MNNDTPQIVTPLGLALHNARLKASLSVEQVANLLNLKESVVRELEDDISALIESGKYAPIYLRGYLANYAKLVALKSLNE
FVEYQQFSKHQARDTSLRATASMAPAGKKRLIPRWLLLALLLVAILAIVFAKQPDLFFAGEAATKVSAESSENIENKPFN
PVAINNEGSPALTETTVGAAVDETISEAVVDTTIGEAVVDTTVSEAAVDETIGEAVVDTTVSEAVVDTTVSEAVVGTIVS
KAVVDTTISEAAVDKNINETVIESTVNQTSSANKINTENISVKLENNEQLESPPTAISESLYLSFSADCWTEIVDATGER
LAFGLYKQDDILSIDGIAPFEIKLGAPSAVVVKYQGKRIEPDFTAGQTLQFSIPE
>Mature_375_residues
MNNDTPQIVTPLGLALHNARLKASLSVEQVANLLNLKESVVRELEDDISALIESGKYAPIYLRGYLANYAKLVALKSLNE
FVEYQQFSKHQARDTSLRATASMAPAGKKRLIPRWLLLALLLVAILAIVFAKQPDLFFAGEAATKVSAESSENIENKPFN
PVAINNEGSPALTETTVGAAVDETISEAVVDTTIGEAVVDTTVSEAAVDETIGEAVVDTTVSEAVVDTTVSEAVVGTIVS
KAVVDTTISEAAVDKNINETVIESTVNQTSSANKINTENISVKLENNEQLESPPTAISESLYLSFSADCWTEIVDATGER
LAFGLYKQDDILSIDGIAPFEIKLGAPSAVVVKYQGKRIEPDFTAGQTLQFSIPE

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=67, Percent_Identity=44.7761194029851, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 40163; Mature: 40163

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDTPQIVTPLGLALHNARLKASLSVEQVANLLNLKESVVRELEDDISALIESGKYAPI
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
YLRGYLANYAKLVALKSLNEFVEYQQFSKHQARDTSLRATASMAPAGKKRLIPRWLLLAL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHH
LLVAILAIVFAKQPDLFFAGEAATKVSAESSENIENKPFNPVAINNEGSPALTETTVGAA
HHHHHHHHHHCCCCCEEEECCCHHEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
VDETISEAVVDTTIGEAVVDTTVSEAAVDETIGEAVVDTTVSEAVVDTTVSEAVVGTIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVVDTTISEAAVDKNINETVIESTVNQTSSANKINTENISVKLENNEQLESPPTAISES
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCC
LYLSFSADCWTEIVDATGERLAFGLYKQDDILSIDGIAPFEIKLGAPSAVVVKYQGKRIE
EEEEECHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCC
PDFTAGQTLQFSIPE
CCCCCCCEEEEECCC
>Mature Secondary Structure
MNNDTPQIVTPLGLALHNARLKASLSVEQVANLLNLKESVVRELEDDISALIESGKYAPI
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
YLRGYLANYAKLVALKSLNEFVEYQQFSKHQARDTSLRATASMAPAGKKRLIPRWLLLAL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHH
LLVAILAIVFAKQPDLFFAGEAATKVSAESSENIENKPFNPVAINNEGSPALTETTVGAA
HHHHHHHHHHCCCCCEEEECCCHHEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
VDETISEAVVDTTIGEAVVDTTVSEAAVDETIGEAVVDTTVSEAVVDTTVSEAVVGTIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVVDTTISEAAVDKNINETVIESTVNQTSSANKINTENISVKLENNEQLESPPTAISES
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCC
LYLSFSADCWTEIVDATGERLAFGLYKQDDILSIDGIAPFEIKLGAPSAVVVKYQGKRIE
EEEEECHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCC
PDFTAGQTLQFSIPE
CCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA