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The map label for this gene is 119944921

Identifier: 119944921

GI number: 119944921

Start: 1456025

End: 1456810

Strand: Direct

Name: 119944921

Synonym: Ping_1166

Alternate gene names: NA

Gene position: 1456025-1456810 (Clockwise)

Preceding gene: 119944920

Following gene: 119944922

Centisome position: 31.93

GC content: 34.99

Gene sequence:

>786_bases
ATGCGTCAAACTTTTTTTTCTATTTTGCTCTTGCTCGTTTTGTCGGGCTGTACTTCGAGTGCAACGACGACCACTACCAA
AAATACTGGTGCGGGTCAAAAAATGGCATTGGACCCAGAGGGTGCATCCAGAATACGTGTGAAACTTGCACTCGTTTATT
TAGAAAATAAGCAGATGCAGCAAGCGAAAGAAAATCTTGAAAAAGCATTAGAATACCAGCCTAAAGATGCCACTGTTTAT
CGTGTTTTTGCTTATTATTATCAAGCAGTCAAGGAAAATGAAAAAGCTGAACAGATGTATAAAAAGTCTCTATCCCTAGA
TCCCAAAAATTCGGATACTTACAATAATTATGGTACATTTTTGTGTCAGCAAAAGCGTTACGCAGAAGCAGACAAGGCAT
TTTTAACTGCACTTGAACAGCTTAGTTATAGTAATGTTGCTGATACCTATGAGAATGCGGGATTATGTGCTGAAGAAATA
AAAAATCTAGAGAAAGCATTATTTTATTACCAATCTTCACTTGCACATAATCCGAATAAATTATATTTGAACCTTGTACT
AACAAAGATAAATATCACGAAACAAAATTATACAGAGGCACAATTAAATTTATCCAATTATCAAAAACAAAAAGGATACT
CTGCGGAAAGTTTATGGCAATGGATTCGGTTAAGCTATGCGACCGGACAACATGCAAATATGAATAAATATGCCGGAATA
TTATTAGAAAAATTTCCCGAATCCCATCAAGCACTAGACTATTTAAATCATGGATACTATGAATAA

Upstream 100 bases:

>100_bases
CGTCACAATATGATTACTTCTTTGAGAATATTTGAAACTCTAAAATTAGTGCATTATTACTTTGATGTATTAGATTAGTT
AACGCCATTTTAAGGGATAT

Downstream 100 bases:

>100_bases
CGACACACCTCAAATTGTTACCCCACTGGGTCTCGCATTGCATAATGCCAGACTAAAAGCGTCATTATCAGTCGAACAGG
TTGCTAATCTTTTGAATTTA

Product: type IV pilus biogenesis/stability protein PilW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRQTFFSILLLLVLSGCTSSATTTTTKNTGAGQKMALDPEGASRIRVKLALVYLENKQMQQAKENLEKALEYQPKDATVY
RVFAYYYQAVKENEKAEQMYKKSLSLDPKNSDTYNNYGTFLCQQKRYAEADKAFLTALEQLSYSNVADTYENAGLCAEEI
KNLEKALFYYQSSLAHNPNKLYLNLVLTKINITKQNYTEAQLNLSNYQKQKGYSAESLWQWIRLSYATGQHANMNKYAGI
LLEKFPESHQALDYLNHGYYE

Sequences:

>Translated_261_residues
MRQTFFSILLLLVLSGCTSSATTTTTKNTGAGQKMALDPEGASRIRVKLALVYLENKQMQQAKENLEKALEYQPKDATVY
RVFAYYYQAVKENEKAEQMYKKSLSLDPKNSDTYNNYGTFLCQQKRYAEADKAFLTALEQLSYSNVADTYENAGLCAEEI
KNLEKALFYYQSSLAHNPNKLYLNLVLTKINITKQNYTEAQLNLSNYQKQKGYSAESLWQWIRLSYATGQHANMNKYAGI
LLEKFPESHQALDYLNHGYYE
>Mature_261_residues
MRQTFFSILLLLVLSGCTSSATTTTTKNTGAGQKMALDPEGASRIRVKLALVYLENKQMQQAKENLEKALEYQPKDATVY
RVFAYYYQAVKENEKAEQMYKKSLSLDPKNSDTYNNYGTFLCQQKRYAEADKAFLTALEQLSYSNVADTYENAGLCAEEI
KNLEKALFYYQSSLAHNPNKLYLNLVLTKINITKQNYTEAQLNLSNYQKQKGYSAESLWQWIRLSYATGQHANMNKYAGI
LLEKFPESHQALDYLNHGYYE

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29971; Mature: 29971

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTFFSILLLLVLSGCTSSATTTTTKNTGAGQKMALDPEGASRIRVKLALVYLENKQMQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCHHHH
QAKENLEKALEYQPKDATVYRVFAYYYQAVKENEKAEQMYKKSLSLDPKNSDTYNNYGTF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
LCQQKRYAEADKAFLTALEQLSYSNVADTYENAGLCAEEIKNLEKALFYYQSSLAHNPNK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
LYLNLVLTKINITKQNYTEAQLNLSNYQKQKGYSAESLWQWIRLSYATGQHANMNKYAGI
EEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
LLEKFPESHQALDYLNHGYYE
HHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MRQTFFSILLLLVLSGCTSSATTTTTKNTGAGQKMALDPEGASRIRVKLALVYLENKQMQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCHHHH
QAKENLEKALEYQPKDATVYRVFAYYYQAVKENEKAEQMYKKSLSLDPKNSDTYNNYGTF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
LCQQKRYAEADKAFLTALEQLSYSNVADTYENAGLCAEEIKNLEKALFYYQSSLAHNPNK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
LYLNLVLTKINITKQNYTEAQLNLSNYQKQKGYSAESLWQWIRLSYATGQHANMNKYAGI
EEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
LLEKFPESHQALDYLNHGYYE
HHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]