Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944828
Identifier: 119944828
GI number: 119944828
Start: 1344303
End: 1345382
Strand: Direct
Name: 119944828
Synonym: Ping_1070
Alternate gene names: NA
Gene position: 1344303-1345382 (Clockwise)
Preceding gene: 119944825
Following gene: 119944829
Centisome position: 29.48
GC content: 36.39
Gene sequence:
>1080_bases ATGGTAGTTATATTAATGAAACCAATATTTGTTGTGCGTAATTTTATTGTCCTATTTATTTCGTTCATCTCTTTCACGTC TTGCGTGTTAGCCAACCAGTTTGAAAACCTTTATCAGGGAAATATTATTGTAGAGAACCAGAGTGAACAGCAGTTAAAGG AGCTGGCATTACAGCAAGTATTAATTAAAGTGTCAGGCAACTCGCAGGTCAATATACTGGATGAAAGCCAACAATTATTG ACAAAAACACAAAGTCTATTATCTCAATTTGGTTATCGTAATATTGAAGATAATCGCTATTTTATGGCGGTGTTTGATCC CAGTAAAATAAATCAGGCATTAAAAGAGATGCGCCAGCCTGTTTGGGGTGAAACTCGGCCCCGGACATTAGTTTGGTTAA TTGTCGATAGTGACAGTGAACGTAAACTTATTTCAGATACTATGATTAACAGTGATCAGGATGATGTGCTTTCTTTCGTA CTTAAAAGTACACAGCAGGAGCGCGGTATTAGCTTACACTTTCCGCTAATGGATCTTGATGATAATTTGGCGGTCTCTCT CTTCGATATTTCTGGGCGGTTTTTTGATCAGATAGCAAAGGCTTCTGAGCGTTATGATGCCAGCCTGTTTATTGTTGCTA ATTTAAAACAAAAAGATGAAAAAACATGGGATTTGCAGTGGGAATTAGTTTATAACACCCCACAATCAAAGAAAAATGAA ATAGTTGCATCGGAGCAATTACATGGTGAAAAAAGTGTTATTTTAACCAGTATGACCAACAAGATTGCTGATTATTATGC TGACCAATATGCAATATTAGCAACGGATACTGAGAAATTTTCGCAAAGTATTTACATCAGCGGGATCAGTTCATTGCAAC AGCATGAAAAATTAAATCAAGTACTATCAGGTATTCTGGCAATTGCATCCTATGAAGTCGTCAGCGTTGATGTGAAGCAG GTAAAGGTCAATGTGAAGGTCAATGGTGGCATTAATAGTTTTGAAAATGCACTTAATATACAAACTAACTTACAATTAGA TGCTTCTCAAAGTGAACGTTTTCACTTTAACTGGCGTTAA
Upstream 100 bases:
>100_bases TTCTATCATAGCTGGTACTTATCTGTGTAATTGCTATTAAATCTAATTATCAACTTGCAATAGAATTATATCTGCTTATG ATCACGTTATTGTTGCTTGA
Downstream 100 bases:
>100_bases TTAGGGAACTTCATGCCGCAGGATGAATTACGTTTTCAATATCCTTTATTAGCACTTAAATTTCCTGATGATGAAACCTT TGCAAGTTTTTATCCTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MVVILMKPIFVVRNFIVLFISFISFTSCVLANQFENLYQGNIIVENQSEQQLKELALQQVLIKVSGNSQVNILDESQQLL TKTQSLLSQFGYRNIEDNRYFMAVFDPSKINQALKEMRQPVWGETRPRTLVWLIVDSDSERKLISDTMINSDQDDVLSFV LKSTQQERGISLHFPLMDLDDNLAVSLFDISGRFFDQIAKASERYDASLFIVANLKQKDEKTWDLQWELVYNTPQSKKNE IVASEQLHGEKSVILTSMTNKIADYYADQYAILATDTEKFSQSIYISGISSLQQHEKLNQVLSGILAIASYEVVSVDVKQ VKVNVKVNGGINSFENALNIQTNLQLDASQSERFHFNWR
Sequences:
>Translated_359_residues MVVILMKPIFVVRNFIVLFISFISFTSCVLANQFENLYQGNIIVENQSEQQLKELALQQVLIKVSGNSQVNILDESQQLL TKTQSLLSQFGYRNIEDNRYFMAVFDPSKINQALKEMRQPVWGETRPRTLVWLIVDSDSERKLISDTMINSDQDDVLSFV LKSTQQERGISLHFPLMDLDDNLAVSLFDISGRFFDQIAKASERYDASLFIVANLKQKDEKTWDLQWELVYNTPQSKKNE IVASEQLHGEKSVILTSMTNKIADYYADQYAILATDTEKFSQSIYISGISSLQQHEKLNQVLSGILAIASYEVVSVDVKQ VKVNVKVNGGINSFENALNIQTNLQLDASQSERFHFNWR >Mature_359_residues MVVILMKPIFVVRNFIVLFISFISFTSCVLANQFENLYQGNIIVENQSEQQLKELALQQVLIKVSGNSQVNILDESQQLL TKTQSLLSQFGYRNIEDNRYFMAVFDPSKINQALKEMRQPVWGETRPRTLVWLIVDSDSERKLISDTMINSDQDDVLSFV LKSTQQERGISLHFPLMDLDDNLAVSLFDISGRFFDQIAKASERYDASLFIVANLKQKDEKTWDLQWELVYNTPQSKKNE IVASEQLHGEKSVILTSMTNKIADYYADQYAILATDTEKFSQSIYISGISSLQQHEKLNQVLSGILAIASYEVVSVDVKQ VKVNVKVNGGINSFENALNIQTNLQLDASQSERFHFNWR
Specific function: Unknown
COG id: COG3249
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41063; Mature: 41063
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVILMKPIFVVRNFIVLFISFISFTSCVLANQFENLYQGNIIVENQSEQQLKELALQQV CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH LIKVSGNSQVNILDESQQLLTKTQSLLSQFGYRNIEDNRYFMAVFDPSKINQALKEMRQP EEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHCC VWGETRPRTLVWLIVDSDSERKLISDTMINSDQDDVLSFVLKSTQQERGISLHFPLMDLD CCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECEEECC DNLAVSLFDISGRFFDQIAKASERYDASLFIVANLKQKDEKTWDLQWELVYNTPQSKKNE CCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCC IVASEQLHGEKSVILTSMTNKIADYYADQYAILATDTEKFSQSIYISGISSLQQHEKLNQ EEEHHHCCCCCCEEEEHHHHHHHHHHCCCEEEEEECHHHHHCEEEEHHHHHHHHHHHHHH VLSGILAIASYEVVSVDVKQVKVNVKVNGGINSFENALNIQTNLQLDASQSERFHFNWR HHHHHHHHHHHHEEEEEEEEEEEEEEECCCCHHHHHHEEEEEEEEEECCCCCCEEECCC >Mature Secondary Structure MVVILMKPIFVVRNFIVLFISFISFTSCVLANQFENLYQGNIIVENQSEQQLKELALQQV CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH LIKVSGNSQVNILDESQQLLTKTQSLLSQFGYRNIEDNRYFMAVFDPSKINQALKEMRQP EEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHCC VWGETRPRTLVWLIVDSDSERKLISDTMINSDQDDVLSFVLKSTQQERGISLHFPLMDLD CCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECEEECC DNLAVSLFDISGRFFDQIAKASERYDASLFIVANLKQKDEKTWDLQWELVYNTPQSKKNE CCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCC IVASEQLHGEKSVILTSMTNKIADYYADQYAILATDTEKFSQSIYISGISSLQQHEKLNQ EEEHHHCCCCCCEEEEHHHHHHHHHHCCCEEEEEECHHHHHCEEEEHHHHHHHHHHHHHH VLSGILAIASYEVVSVDVKQVKVNVKVNGGINSFENALNIQTNLQLDASQSERFHFNWR HHHHHHHHHHHHEEEEEEEEEEEEEEECCCCHHHHHHEEEEEEEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA