Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944792
Identifier: 119944792
GI number: 119944792
Start: 1304820
End: 1306304
Strand: Direct
Name: 119944792
Synonym: Ping_1034
Alternate gene names: NA
Gene position: 1304820-1306304 (Clockwise)
Preceding gene: 119944786
Following gene: 119944793
Centisome position: 28.62
GC content: 43.43
Gene sequence:
>1485_bases ATGAAGCACTACAACAAACTTTCTGAGCATTATAAAAAAATTGCCAATTTTGAACACTTGGCCTCGGTCGCCGGCTGGGA TCAGGCGGTGATGATGCCTGCGGGGGGCAATGAATCTCGGGCAAAAGCCATGGCTGAACTCTCCGTTCATATACATCAGT TATCAACGTCGGAACATCTTGGAGAATTGTTTGCTGATGCGCAATCGGAAAATATAAGCGCTATTGAGTCCGCGAGTTTA CGTGAAATGAAAGCGTCATGGCAAAAAGCGACTGTGCTACCGGCTCGTTTGGTAGAGGCTCAATCATTAGCCGGTTCTAA ATGCGGACACGCCTGGCGTACGCAACGCGGCGAAAATGATTGGCAGGGATTTTCTAAAAACTTTGCCGAGGTGGTGTTGT TATCTCAAGAAGAAGCGTCGATTCGAGCAGATGCCGCTAATAAAACCCCCTATGATGCCATGTTAGATCTTTATGAACCT GGCACGACGAGTGAGCAGCTAGATAGTATTTTTGGAAATTTAAAAACCTGGCTGCCTGATTTAACTCAGAAAGTTCAGCT GCGCCAAAGCGGTCAGCAATTTATCAAACCGACGGAAAATTACAGTACTAAGCAGCAGAATGCGCTTGGTCTGGATATTA TGAAGCTGCTTGAGTTTGATTTTAATCACGGGCGATTAGATATCAGTGCACACCCCTTCTGTGGTGGCACCAGTCAAGAT GTCCGGATCACAACACGTTATGATGAAACGGACTTTATACAATCTATGATGGGCATTGTCCATGAAACCGGGCATGCCCG TTACGAGCAGGGTTTACCCAAATCACTCAAGGGGCTGCCGGTTGGTGAAGCCCGTTCGATGGGTATCCATGAATCTCAAA GTCTCTTTTTTGAAATGCAGTTGGGCCGCAGTAAGGAATTTATTGATCAACTTGTGCCCTTAGTTTTAAAACATTTTCCG GATAATAATCCTGCCGTATTTGAGGCTGATAATCTGCAGAAAATATACACGCGTGTTAATCCCGGATTAATTCGCGTTGA TGCCGATGAGGTCACGTATCCAGCTCATATTATGTTACGTTATGAAATAGAACGTGATTTAATGAATGGCAATATCAATT ATACGGATATCCCGGAATTATGGGATCTTAAAATGCAGCAATATTTAGGTATTTCAACTGCGGGTAACTACAAAAATGGT TGTATGCAGGATATACACTGGACAGATGGCGCGTTTGGATATTTTCCCAGTTATACCTTGGGCGCTATGTACGCGGCGCA GTTTATGACCGCGATGAAAAAACAGGTGGACGTTAATACCTGTCTGAGCGAACAAAATTTAAAGCCTATTTTCAATTGGT TAAATAAAAATATTTGGAGCAAAGCAAGTTTATTGACAACCGATCAGTTAGTTAAGCAGGCAACAGGTGAAACCCTTAAC CCCGCTTTATACGGGAAGCATCTGCAACAAAGATATTTAAGTTAA
Upstream 100 bases:
>100_bases GGATCGCGTAGAATAACTATTTGAATTTAAATTGATTTCCGTATTGCTTTTTTTCAAGCAGATAAATAATCATTTCACCT TTGATTCGTAGGATAAAATT
Downstream 100 bases:
>100_bases GATTTTCCAATTTATGCAGTTTATGCATAGATAATATGATTAAGTTTCATTTTTTTCATAAACTATTTTGACCTAAAATA TCTATTTTTTAAAGCATCTT
Product: carboxypeptidase Taq
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHLGELFADAQSENISAIESASL REMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGENDWQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEP GTTSEQLDSIFGNLKTWLPDLTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQLGRSKEFIDQLVPLVLKHFP DNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLRYEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNG CMQDIHWTDGAFGYFPSYTLGAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN PALYGKHLQQRYLS
Sequences:
>Translated_494_residues MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHLGELFADAQSENISAIESASL REMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGENDWQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEP GTTSEQLDSIFGNLKTWLPDLTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQLGRSKEFIDQLVPLVLKHFP DNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLRYEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNG CMQDIHWTDGAFGYFPSYTLGAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN PALYGKHLQQRYLS >Mature_494_residues MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHLGELFADAQSENISAIESASL REMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGENDWQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEP GTTSEQLDSIFGNLKTWLPDLTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQLGRSKEFIDQLVPLVLKHFP DNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLRYEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNG CMQDIHWTDGAFGYFPSYTLGAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN PALYGKHLQQRYLS
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 55779; Mature: 55779
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHL CCHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH GELFADAQSENISAIESASLREMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGEND HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCH WQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEPGTTSEQLDSIFGNLKTWLPD HHHHHHCHHHEEEECCCCHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQ EEEEEECCHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCHHCCCCCCCHHEEEEEC LGRSKEFIDQLVPLVLKHFPDNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLR CCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCEEEECCCCCCCCEEEEEE YEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNGCMQDIHWTDGAFGYFPSYTL EEEHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH GAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PALYGKHLQQRYLS HHHHHHHHHHHHCC >Mature Secondary Structure MKHYNKLSEHYKKIANFEHLASVAGWDQAVMMPAGGNESRAKAMAELSVHIHQLSTSEHL CCHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH GELFADAQSENISAIESASLREMKASWQKATVLPARLVEAQSLAGSKCGHAWRTQRGEND HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCH WQGFSKNFAEVVLLSQEEASIRADAANKTPYDAMLDLYEPGTTSEQLDSIFGNLKTWLPD HHHHHHCHHHEEEECCCCHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LTQKVQLRQSGQQFIKPTENYSTKQQNALGLDIMKLLEFDFNHGRLDISAHPFCGGTSQD HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC VRITTRYDETDFIQSMMGIVHETGHARYEQGLPKSLKGLPVGEARSMGIHESQSLFFEMQ EEEEEECCHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCHHCCCCCCCHHEEEEEC LGRSKEFIDQLVPLVLKHFPDNNPAVFEADNLQKIYTRVNPGLIRVDADEVTYPAHIMLR CCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCEEEECCCCCCCCEEEEEE YEIERDLMNGNINYTDIPELWDLKMQQYLGISTAGNYKNGCMQDIHWTDGAFGYFPSYTL EEEHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH GAMYAAQFMTAMKKQVDVNTCLSEQNLKPIFNWLNKNIWSKASLLTTDQLVKQATGETLN HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PALYGKHLQQRYLS HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]