Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is msrA2 [H]
Identifier: 119944786
GI number: 119944786
Start: 1297140
End: 1297730
Strand: Direct
Name: msrA2 [H]
Synonym: Ping_1028
Alternate gene names: 119944786
Gene position: 1297140-1297730 (Clockwise)
Preceding gene: 119944785
Following gene: 119944792
Centisome position: 28.45
GC content: 43.49
Gene sequence:
>591_bases ATGAAATCTAAATTGATACTCTTTATTTTAAGCAGTTGTCTGTTGTACAGTGCCAATGCACTGGCAGATAAAGCTGTCCT GGCCGGAGGATGTTTTTGGTGCATGGAAGCAGACTTTGAAAAACTTGAAGGGGTGAATGATGTCGTCTCAGGTTTTACCG GCGGGAAATTAAAAAACCCAACCTATAACGGTAATCACCAGGGGCACTATGAAGCAGTGGAAATCACCTATGATGCGGAT AAAATAAGTTACCAGGCACTGCTGGATCATTATTGGGTCAATATCGACCCCTTTGACGAGCGAGGGCAGTTTTGCGATAA AGGGCCAAGTTACCTCAGTGCTATTTTTGTTGCCAATGAACAGCAAAGGAAAACAGCAGAACAATCTAAAGCGTTGATAG CAGAGCAGTTTCTCGATCAAACCATTGTTACGCCCATTTTACCGGCAGCGGTTTTTTATCCGATTAAAGGTAACGAGAGT TATCATCAGAACTATGCTGAAAACAACCCGATTCGTTATAAGGCTTATCGTTGGAATTGCGGGCGGGATAAACGTCTCAA GGAAATTTGGGGCGAGAAGGTGACTCACTGA
Upstream 100 bases:
>100_bases GAGCAAGGCTGATCATCTATTTGATGCGTTTCGTATTATCATTAAGCTAAGCAACTGCTTGGCTTTTTTAAACGCAATTT TTTACCAAGGAATAAGCTTA
Downstream 100 bases:
>100_bases TTAGTGCGTGACTGACAGCTAGCTGACTAATATAAAAAACGCTGATAATTCAGCGTTTTTTTATGCATTATATTCGCAAG TTTTACTGATTTCTGTTTTT
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKSKLILFILSSCLLYSANALADKAVLAGGCFWCMEADFEKLEGVNDVVSGFTGGKLKNPTYNGNHQGHYEAVEITYDAD KISYQALLDHYWVNIDPFDERGQFCDKGPSYLSAIFVANEQQRKTAEQSKALIAEQFLDQTIVTPILPAAVFYPIKGNES YHQNYAENNPIRYKAYRWNCGRDKRLKEIWGEKVTH
Sequences:
>Translated_196_residues MKSKLILFILSSCLLYSANALADKAVLAGGCFWCMEADFEKLEGVNDVVSGFTGGKLKNPTYNGNHQGHYEAVEITYDAD KISYQALLDHYWVNIDPFDERGQFCDKGPSYLSAIFVANEQQRKTAEQSKALIAEQFLDQTIVTPILPAAVFYPIKGNES YHQNYAENNPIRYKAYRWNCGRDKRLKEIWGEKVTH >Mature_196_residues MKSKLILFILSSCLLYSANALADKAVLAGGCFWCMEADFEKLEGVNDVVSGFTGGKLKNPTYNGNHQGHYEAVEITYDAD KISYQALLDHYWVNIDPFDERGQFCDKGPSYLSAIFVANEQQRKTAEQSKALIAEQFLDQTIVTPILPAAVFYPIKGNES YHQNYAENNPIRYKAYRWNCGRDKRLKEIWGEKVTH
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=156, Percent_Identity=35.8974358974359, Blast_Score=83, Evalue=1e-16, Organism=Homo sapiens, GI208609995, Length=156, Percent_Identity=35.8974358974359, Blast_Score=83, Evalue=1e-16, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=39.2156862745098, Blast_Score=91, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17533973, Length=146, Percent_Identity=35.6164383561644, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24664627, Length=151, Percent_Identity=33.112582781457, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI45553131, Length=136, Percent_Identity=35.2941176470588, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24664631, Length=151, Percent_Identity=32.4503311258278, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 22275; Mature: 22275
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKLILFILSSCLLYSANALADKAVLAGGCFWCMEADFEKLEGVNDVVSGFTGGKLKNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCHHHHHCCCCCCCCCCC TYNGNHQGHYEAVEITYDADKISYQALLDHYWVNIDPFDERGQFCDKGPSYLSAIFVANE CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHCCCC QQRKTAEQSKALIAEQFLDQTIVTPILPAAVFYPIKGNESYHQNYAENNPIRYKAYRWNC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCCEEEEEEEECC GRDKRLKEIWGEKVTH CCCHHHHHHHHHCCCC >Mature Secondary Structure MKSKLILFILSSCLLYSANALADKAVLAGGCFWCMEADFEKLEGVNDVVSGFTGGKLKNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCHHHHHCCCCCCCCCCC TYNGNHQGHYEAVEITYDADKISYQALLDHYWVNIDPFDERGQFCDKGPSYLSAIFVANE CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHCCCC QQRKTAEQSKALIAEQFLDQTIVTPILPAAVFYPIKGNESYHQNYAENNPIRYKAYRWNC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCCEEEEEEEECC GRDKRLKEIWGEKVTH CCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]