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The map label for this gene is yhdH [H]

Identifier: 119944793

GI number: 119944793

Start: 1306426

End: 1307406

Strand: Direct

Name: yhdH [H]

Synonym: Ping_1035

Alternate gene names: 119944793

Gene position: 1306426-1307406 (Clockwise)

Preceding gene: 119944792

Following gene: 119944798

Centisome position: 28.65

GC content: 45.87

Gene sequence:

>981_bases
ATGTTTAAAGCACTTATTCTAAATCAGCAAGACAAAAAAACCATTGCAGAAATTTGCCAAATTGATGAATCTCAGTTACC
TGAAGGAGAAGTCTTAATTGATGTTGATTATTCATCATTAAACTATAAAGATGGTTTAGCTATTACTGGTAAAGGGAAAG
TTGTTCGTCAATTTCCTATGGTACCGGGTATCGATTTAGCCGGTCAGGTGGTTGAATCTAAGGATGCACGTTATCAGGCA
GGCGATAATGTTGTATTAACAGGTTGGGGCGTCGGTGAAGGCCATTGGGGCGGCATGGCAGAAAAAGCGAATTTACAAGC
TGATTGGCTGGTGCCTCTTCCACAGGGAATGACCGGTAAACAGGCGATGATGATTGGCACCGCAGGCTTAACGGCTATGT
TATGTGTACAAGCCTTAGTAGATGCAGGCATTACACCTGAAAGCGGTGAAATATTAGTGACCGGTGCAAGTGGCGGTGTT
GGTTCGGTGGCTGTGACTTTATTGGCACAACTGGGTTATCGGGCTGTTGCTGTGACCGGCAGAGTAGAAGAAAATGGCGA
GCTGTTAAAGCAACTGGGTGCCAGCCGAGTTATCCCGCGTTCTGAACTTGAAGAGCCAATCCGCCCATTAGACAAACAGT
TATGGGCAGGGGCCGTGGATACAGCCGGCAGTAAAATACTGGCTAAAGTCCTGTCGCAAATCAGTTATGACGGTGCGGTT
GCAGCATGTGGTTTGGCCAATGGTTTTGATTTACCAACGACTGTTATGCCGTTTATTTTACGTGGTGTTAAATTATTAGG
TGTTGATTCTGTTTCTTGCCCCTATGCGCGCCGTATGGCAGCGTGGAAACGTATCGCTGAAATTTTGCCGGCCAGTTATT
ACCAGCAAGCCTGCAACGAAATCGAGTTAGAACAAGCAGCAGAATATGCCGAAGCTATCACTAACGGACAAGTGACCGGA
CGTATAGTCATCAAGCTGTAA

Upstream 100 bases:

>100_bases
TATGCATAGATAATATGATTAAGTTTCATTTTTTTCATAAACTATTTTGACCTAAAATATCTATTTTTTAAAGCATCTTT
ATTATTTACGGAGTCTCTCT

Downstream 100 bases:

>100_bases
ATATTATATTGCTTGACCGATAAAATAGTATAATAAGCCTGCTACTGCAGGCTTTTTTTAATTAATTTTTCTCACTAACC
CAATCCCATATCATCTATCC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MFKALILNQQDKKTIAEICQIDESQLPEGEVLIDVDYSSLNYKDGLAITGKGKVVRQFPMVPGIDLAGQVVESKDARYQA
GDNVVLTGWGVGEGHWGGMAEKANLQADWLVPLPQGMTGKQAMMIGTAGLTAMLCVQALVDAGITPESGEILVTGASGGV
GSVAVTLLAQLGYRAVAVTGRVEENGELLKQLGASRVIPRSELEEPIRPLDKQLWAGAVDTAGSKILAKVLSQISYDGAV
AACGLANGFDLPTTVMPFILRGVKLLGVDSVSCPYARRMAAWKRIAEILPASYYQQACNEIELEQAAEYAEAITNGQVTG
RIVIKL

Sequences:

>Translated_326_residues
MFKALILNQQDKKTIAEICQIDESQLPEGEVLIDVDYSSLNYKDGLAITGKGKVVRQFPMVPGIDLAGQVVESKDARYQA
GDNVVLTGWGVGEGHWGGMAEKANLQADWLVPLPQGMTGKQAMMIGTAGLTAMLCVQALVDAGITPESGEILVTGASGGV
GSVAVTLLAQLGYRAVAVTGRVEENGELLKQLGASRVIPRSELEEPIRPLDKQLWAGAVDTAGSKILAKVLSQISYDGAV
AACGLANGFDLPTTVMPFILRGVKLLGVDSVSCPYARRMAAWKRIAEILPASYYQQACNEIELEQAAEYAEAITNGQVTG
RIVIKL
>Mature_326_residues
MFKALILNQQDKKTIAEICQIDESQLPEGEVLIDVDYSSLNYKDGLAITGKGKVVRQFPMVPGIDLAGQVVESKDARYQA
GDNVVLTGWGVGEGHWGGMAEKANLQADWLVPLPQGMTGKQAMMIGTAGLTAMLCVQALVDAGITPESGEILVTGASGGV
GSVAVTLLAQLGYRAVAVTGRVEENGELLKQLGASRVIPRSELEEPIRPLDKQLWAGAVDTAGSKILAKVLSQISYDGAV
AACGLANGFDLPTTVMPFILRGVKLLGVDSVSCPYARRMAAWKRIAEILPASYYQQACNEIELEQAAEYAEAITNGQVTG
RIVIKL

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=325, Percent_Identity=62.7692307692308, Blast_Score=424, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI71988145, Length=337, Percent_Identity=24.9258160237389, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34588; Mature: 34588

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKALILNQQDKKTIAEICQIDESQLPEGEVLIDVDYSSLNYKDGLAITGKGKVVRQFPM
CCCEEEECCCHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEECCC
VPGIDLAGQVVESKDARYQAGDNVVLTGWGVGEGHWGGMAEKANLQADWLVPLPQGMTGK
CCCCCHHHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
QAMMIGTAGLTAMLCVQALVDAGITPESGEILVTGASGGVGSVAVTLLAQLGYRAVAVTG
CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
RVEENGELLKQLGASRVIPRSELEEPIRPLDKQLWAGAVDTAGSKILAKVLSQISYDGAV
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHCCCCCC
AACGLANGFDLPTTVMPFILRGVKLLGVDSVSCPYARRMAAWKRIAEILPASYYQQACNE
CCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
IELEQAAEYAEAITNGQVTGRIVIKL
CCHHHHHHHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure
MFKALILNQQDKKTIAEICQIDESQLPEGEVLIDVDYSSLNYKDGLAITGKGKVVRQFPM
CCCEEEECCCHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEECCC
VPGIDLAGQVVESKDARYQAGDNVVLTGWGVGEGHWGGMAEKANLQADWLVPLPQGMTGK
CCCCCHHHHHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
QAMMIGTAGLTAMLCVQALVDAGITPESGEILVTGASGGVGSVAVTLLAQLGYRAVAVTG
CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
RVEENGELLKQLGASRVIPRSELEEPIRPLDKQLWAGAVDTAGSKILAKVLSQISYDGAV
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHCCCCCC
AACGLANGFDLPTTVMPFILRGVKLLGVDSVSCPYARRMAAWKRIAEILPASYYQQACNE
CCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
IELEQAAEYAEAITNGQVTGRIVIKL
CCHHHHHHHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]