| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is fur [H]
Identifier: 119944634
GI number: 119944634
Start: 1094353
End: 1094781
Strand: Reverse
Name: fur [H]
Synonym: Ping_0873
Alternate gene names: 119944634
Gene position: 1094781-1094353 (Counterclockwise)
Preceding gene: 119944635
Following gene: 119944632
Centisome position: 24.01
GC content: 35.9
Gene sequence:
>429_bases ATGTCGATAGAAAATGATGCATTAAAAGAAGCCGGACTAAAAATAACATCACCACGAGTGAAAATTTTGAGTTTATTACA ACGACCTGATAATCAACATATTAGTGCGGAAGATCTCTATAAAAAACTACTTGAACAAGGTGATGAAGTAGGTGTAGCGA CGGTTTATCGTGTATTAAATCAATTTGACGATGCAGGAATAGTCACTCGCCATCATTTTGAGGGTGGAAAATCCGTTTTT GAGCTTGCCAATCAAGAGCATCATGATCACCTTGTCTGTTTAACCTGTGGAGAGGTTATTGAATTTAATGATGATCTAAT AGAAAATCAGCAACAGCTCATTGCAGAAAAACACGGAATTAAGTTAACTAATCACAGCCTTTATCTGTTTGGTGAAGCAA TTGATGGTAAATGCAAGCATAAAACATAG
Upstream 100 bases:
>100_bases GCTGCTCGCGTAAAAGAATGGTCAAAACAGGTTTATGATGAAATGTGTCTTGCTGAACTTGCAGATTAATTATTCGCAGC GAAAATCCTAGGAATCCAGC
Downstream 100 bases:
>100_bases CCAATAGTTATCATCTGAAAGCCTCAGTTATCATATTAAAAGCCTCGTTTAGCCTATTGTAAACGGGGCTTTTTTTTATA CATAACAAGCTAGCGTATGT
Product: ferric uptake regulator, Fur family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSIENDALKEAGLKITSPRVKILSLLQRPDNQHISAEDLYKKLLEQGDEVGVATVYRVLNQFDDAGIVTRHHFEGGKSVF ELANQEHHDHLVCLTCGEVIEFNDDLIENQQQLIAEKHGIKLTNHSLYLFGEAIDGKCKHKT
Sequences:
>Translated_142_residues MSIENDALKEAGLKITSPRVKILSLLQRPDNQHISAEDLYKKLLEQGDEVGVATVYRVLNQFDDAGIVTRHHFEGGKSVF ELANQEHHDHLVCLTCGEVIEFNDDLIENQQQLIAEKHGIKLTNHSLYLFGEAIDGKCKHKT >Mature_141_residues SIENDALKEAGLKITSPRVKILSLLQRPDNQHISAEDLYKKLLEQGDEVGVATVYRVLNQFDDAGIVTRHHFEGGKSVFE LANQEHHDHLVCLTCGEVIEFNDDLIENQQQLIAEKHGIKLTNHSLYLFGEAIDGKCKHKT
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of several outer-membrane proteins including the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=139, Percent_Identity=69.7841726618705, Blast_Score=211, Evalue=1e-56,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16016; Mature: 15885
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIENDALKEAGLKITSPRVKILSLLQRPDNQHISAEDLYKKLLEQGDEVGVATVYRVLN CCCCHHHHHHCCCEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH QFDDAGIVTRHHFEGGKSVFELANQEHHDHLVCLTCGEVIEFNDDLIENQQQLIAEKHGI HCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHCCC KLTNHSLYLFGEAIDGKCKHKT EEECCEEEEEECCCCCCCCCCC >Mature Secondary Structure SIENDALKEAGLKITSPRVKILSLLQRPDNQHISAEDLYKKLLEQGDEVGVATVYRVLN CCCHHHHHHCCCEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH QFDDAGIVTRHHFEGGKSVFELANQEHHDHLVCLTCGEVIEFNDDLIENQQQLIAEKHGI HCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHCCC KLTNHSLYLFGEAIDGKCKHKT EEECCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9055816 [H]