| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is fldA [H]
Identifier: 119944635
GI number: 119944635
Start: 1094813
End: 1095340
Strand: Reverse
Name: fldA [H]
Synonym: Ping_0874
Alternate gene names: 119944635
Gene position: 1095340-1094813 (Counterclockwise)
Preceding gene: 119944636
Following gene: 119944634
Centisome position: 24.02
GC content: 39.2
Gene sequence:
>528_bases ATGGCTAGCGTGGGTATTTTTTTTGGTAGTGACACGGGCAACACTGAAGCTGTTGCTAAAATGATCCAGAAAGAGTTAGG TAAAAAATTAGTTGAAGTAAAAGATATAGCAAAAAGCACCAAGGAAGAAATTGCTGAATATAGTTTGATCCTATTTGGTA TTCCAACTTGGTACTACGGTGAAGCGCAATGTGACTGGGATGATTTTTTTCCGGAATTAGAAGAGATTGATTTTAACGAC AAGTTAGTGGCTATTTTTGGTTGTGGTGATCAGGAAGATTATGCAGAATACTTTCTGGATGCGATGGGTCAACTCGGTGA CATAGTAGAAAGTAAGGGCGCTATTATTGTTGGCCACTGGCCTAGCAAAGGTTATTATCATGAAGCATCCAAAGCGCAAA TTGATGATGACCATTTAATTGGCCTTGGTATTGATGAAGATCGTCAGCCTGAATTAACCGCTGCTCGCGTAAAAGAATGG TCAAAACAGGTTTATGATGAAATGTGTCTTGCTGAACTTGCAGATTAA
Upstream 100 bases:
>100_bases TAAATCAGCTATCAAAAGATCAAGAAATTACCCGTGGAGAGTTAATTAAGCAGTTACTTCACGAGCAATTAATTTAATTT ATAAATAAAGGTAATCGACT
Downstream 100 bases:
>100_bases TTATTCGCAGCGAAAATCCTAGGAATCCAGCATGTCGATAGAAAATGATGCATTAAAAGAAGCCGGACTAAAAATAACAT CACCACGAGTGAAAATTTTG
Product: flavodoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MASVGIFFGSDTGNTEAVAKMIQKELGKKLVEVKDIAKSTKEEIAEYSLILFGIPTWYYGEAQCDWDDFFPELEEIDFND KLVAIFGCGDQEDYAEYFLDAMGQLGDIVESKGAIIVGHWPSKGYYHEASKAQIDDDHLIGLGIDEDRQPELTAARVKEW SKQVYDEMCLAELAD
Sequences:
>Translated_175_residues MASVGIFFGSDTGNTEAVAKMIQKELGKKLVEVKDIAKSTKEEIAEYSLILFGIPTWYYGEAQCDWDDFFPELEEIDFND KLVAIFGCGDQEDYAEYFLDAMGQLGDIVESKGAIIVGHWPSKGYYHEASKAQIDDDHLIGLGIDEDRQPELTAARVKEW SKQVYDEMCLAELAD >Mature_174_residues ASVGIFFGSDTGNTEAVAKMIQKELGKKLVEVKDIAKSTKEEIAEYSLILFGIPTWYYGEAQCDWDDFFPELEEIDFNDK LVAIFGCGDQEDYAEYFLDAMGQLGDIVESKGAIIVGHWPSKGYYHEASKAQIDDDHLIGLGIDEDRQPELTAARVKEWS KQVYDEMCLAELAD
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=173, Percent_Identity=69.9421965317919, Blast_Score=262, Evalue=7e-72, Organism=Escherichia coli, GI1789262, Length=168, Percent_Identity=37.5, Blast_Score=135, Evalue=2e-33,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 19651; Mature: 19520
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVGIFFGSDTGNTEAVAKMIQKELGKKLVEVKDIAKSTKEEIAEYSLILFGIPTWYYG CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEECC EAQCDWDDFFPELEEIDFNDKLVAIFGCGDQEDYAEYFLDAMGQLGDIVESKGAIIVGHW CCCCCHHHHCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PSKGYYHEASKAQIDDDHLIGLGIDEDRQPELTAARVKEWSKQVYDEMCLAELAD CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASVGIFFGSDTGNTEAVAKMIQKELGKKLVEVKDIAKSTKEEIAEYSLILFGIPTWYYG CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEECC EAQCDWDDFFPELEEIDFNDKLVAIFGCGDQEDYAEYFLDAMGQLGDIVESKGAIIVGHW CCCCCHHHHCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PSKGYYHEASKAQIDDDHLIGLGIDEDRQPELTAARVKEWSKQVYDEMCLAELAD CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]