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The map label for this gene is yrkF [H]

Identifier: 119944632

GI number: 119944632

Start: 1092335

End: 1092718

Strand: Reverse

Name: yrkF [H]

Synonym: Ping_0871

Alternate gene names: 119944632

Gene position: 1092718-1092335 (Counterclockwise)

Preceding gene: 119944634

Following gene: 119944626

Centisome position: 23.97

GC content: 38.28

Gene sequence:

>384_bases
ATGATCATTAAAAATATGCTTAAACTGGCCACTTTATTGTTGTTTAGCAGCTTTTGTAACGCACAAGTTTCACATATAGA
GCCACAACAACTTATCAAACAGATTCAAAATGAAAAGTTGTTGGTGATTCTTGATGTGCGCACAGAAAATGAATATACCC
AAGGGCATATTCAAGGTGCTATTAACATCCCCTATGACCAATTACGCAAAGAGCAGGACAAAATAATTGCTTATAAAGAC
CAACAAGTGATTCTTTATTGCCACTCTGGAAGGCGTGCAGACATGGCAGCAAGGACTTTACAGGCACTGGGCTTTACAAA
ACTCATTGACTTAACCGGGCATATGGTTTTATGGGAGCAATTACAATACCCACTGGTTAACTAA

Upstream 100 bases:

>100_bases
GGACGGTTTGCACTCTATTATTCCCAAGATGCGATTTTCTGCCACTTTGTTATTCCTATTATTGTGTTATATTAGCTAAA
ACTAATAATAGGGTAATACA

Downstream 100 bases:

>100_bases
TAGCTTACCCTCTCATTCTTATAAAACCTTATTAATTAGGCTTCCCGGTCCGACGCAAAGACGGGCAGGGAAAGGTGCCA
ATAGATAGCACTCAAGCGTA

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIIKNMLKLATLLLFSSFCNAQVSHIEPQQLIKQIQNEKLLVILDVRTENEYTQGHIQGAINIPYDQLRKEQDKIIAYKD
QQVILYCHSGRRADMAARTLQALGFTKLIDLTGHMVLWEQLQYPLVN

Sequences:

>Translated_127_residues
MIIKNMLKLATLLLFSSFCNAQVSHIEPQQLIKQIQNEKLLVILDVRTENEYTQGHIQGAINIPYDQLRKEQDKIIAYKD
QQVILYCHSGRRADMAARTLQALGFTKLIDLTGHMVLWEQLQYPLVN
>Mature_127_residues
MIIKNMLKLATLLLFSSFCNAQVSHIEPQQLIKQIQNEKLLVILDVRTENEYTQGHIQGAINIPYDQLRKEQDKIIAYKD
QQVILYCHSGRRADMAARTLQALGFTKLIDLTGHMVLWEQLQYPLVN

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 14694; Mature: 14694

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKNMLKLATLLLFSSFCNAQVSHIEPQQLIKQIQNEKLLVILDVRTENEYTQGHIQGA
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEE
INIPYDQLRKEQDKIIAYKDQQVILYCHSGRRADMAARTLQALGFTKLIDLTGHMVLWEQ
EECCHHHHCCHHCCEEEEECCEEEEEEECCCCHHHHHHHHHHHCHHHHHHHHCHHHHHHH
LQYPLVN
HCCCCCC
>Mature Secondary Structure
MIIKNMLKLATLLLFSSFCNAQVSHIEPQQLIKQIQNEKLLVILDVRTENEYTQGHIQGA
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEE
INIPYDQLRKEQDKIIAYKDQQVILYCHSGRRADMAARTLQALGFTKLIDLTGHMVLWEQ
EECCHHHHCCHHCCEEEEECCEEEEEEECCCCHHHHHHHHHHHCHHHHHHHHCHHHHHHH
LQYPLVN
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]