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The map label for this gene is speB [H]

Identifier: 119944621

GI number: 119944621

Start: 1076210

End: 1077139

Strand: Reverse

Name: speB [H]

Synonym: Ping_0860

Alternate gene names: 119944621

Gene position: 1077139-1076210 (Counterclockwise)

Preceding gene: 119944622

Following gene: 119944614

Centisome position: 23.62

GC content: 43.87

Gene sequence:

>930_bases
ATGAATTCTATTTTTAACCAAGTGGATAATTCCCTTTACTCAAATGCAATGACCTTTTTACGTCTGCCCATGCCGACAGA
TCCGGTTTCCACGGATGCCGATATTGCAGTATTAGGTTTACCCTTTGATTTAGCCACCACAGGGCGCTCTGGCGCACGTA
TGGGGCCAACAGCAATACGTCAGGCATCTATTAATCTTGCATGGGAAGGTAAACGCTTCCCTTGGAAATTTAATCTCCTA
AAAAAAACCAAGATCATTGATGCCGGAGACTTAGTTTACAGCACCGGTGATGCCAATGCGTTTACCCAAAAAGTAACCGC
CGCAGCAACACAGTTACTCGCTTCAGGAAAGGCCATTTTATCCCTCGGAGGGGATCACTTTGTGACCTTACCTTTGTTGC
GTGCCCACCATCAAAAATTTGGGAAAATGGCCTTAATACATTTTGATGCGCATACTGATACTTATCATGATGGCAGTGCT
TATGATCATGGCACTATGTTTTATCATGCGCCCAAGGAAGGCTTGATTGATCCGGAAAAGTCGGTACAAATAGGGATCCG
CACGGCTTATAATGAAACTGGCCACGGTTTTAATGTCATCAATGCACCCCAAGCTAATGATATGCGAGCTGAGCAGATTG
CCTCTTTTATTAAAGAGAAAGTTCAGACTATGCCTGTGTATCTTACTTTTGATATCGATTGTTTAGATCCGGCCTTTGCA
CCCGGTACAGGCACACCCGTATGTGGTGGATTAAGCACAGATAAAATATTAAAAATATTACGCGCATTAACGGATATCAA
TATTGTCGGTATGGATGTTGTCGAAGTTGCACCCGCCTATGATAATAGCGAGATCACCGCGCTGGCGGCTGCCACAATAG
GGGTGGAGTTGCTGCATTTGTGGACAATAAAAAATAAAGACATCTGCTAA

Upstream 100 bases:

>100_bases
ATTACCTGTTGAAGAGCGCGAAAGTATCATTAATGAATTAATCACCGGTTTACAGGGTTATACCTATTTAGAAGATTTTT
AAGGTGGAGAAAAAATTATA

Downstream 100 bases:

>100_bases
CACTTAGATTCAAATAATAAATAAAATCCGATGATGTCTATTATCGGATTTTATTTTTTCCAAGCAATATTGCGCTTAAT
CAGTTAACTCTTGTGATTTC

Product: agmatinase

Products: NA

Alternate protein names: Agmatine ureohydrolase; AUH [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNSIFNQVDNSLYSNAMTFLRLPMPTDPVSTDADIAVLGLPFDLATTGRSGARMGPTAIRQASINLAWEGKRFPWKFNLL
KKTKIIDAGDLVYSTGDANAFTQKVTAAATQLLASGKAILSLGGDHFVTLPLLRAHHQKFGKMALIHFDAHTDTYHDGSA
YDHGTMFYHAPKEGLIDPEKSVQIGIRTAYNETGHGFNVINAPQANDMRAEQIASFIKEKVQTMPVYLTFDIDCLDPAFA
PGTGTPVCGGLSTDKILKILRALTDINIVGMDVVEVAPAYDNSEITALAAATIGVELLHLWTIKNKDIC

Sequences:

>Translated_309_residues
MNSIFNQVDNSLYSNAMTFLRLPMPTDPVSTDADIAVLGLPFDLATTGRSGARMGPTAIRQASINLAWEGKRFPWKFNLL
KKTKIIDAGDLVYSTGDANAFTQKVTAAATQLLASGKAILSLGGDHFVTLPLLRAHHQKFGKMALIHFDAHTDTYHDGSA
YDHGTMFYHAPKEGLIDPEKSVQIGIRTAYNETGHGFNVINAPQANDMRAEQIASFIKEKVQTMPVYLTFDIDCLDPAFA
PGTGTPVCGGLSTDKILKILRALTDINIVGMDVVEVAPAYDNSEITALAAATIGVELLHLWTIKNKDIC
>Mature_309_residues
MNSIFNQVDNSLYSNAMTFLRLPMPTDPVSTDADIAVLGLPFDLATTGRSGARMGPTAIRQASINLAWEGKRFPWKFNLL
KKTKIIDAGDLVYSTGDANAFTQKVTAAATQLLASGKAILSLGGDHFVTLPLLRAHHQKFGKMALIHFDAHTDTYHDGSA
YDHGTMFYHAPKEGLIDPEKSVQIGIRTAYNETGHGFNVINAPQANDMRAEQIASFIKEKVQTMPVYLTFDIDCLDPAFA
PGTGTPVCGGLSTDKILKILRALTDINIVGMDVVEVAPAYDNSEITALAAATIGVELLHLWTIKNKDIC

Specific function: Catalyzes the formation of putrescine from agmatine [H]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family. Agmatinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI37537722, Length=295, Percent_Identity=38.6440677966102, Blast_Score=184, Evalue=1e-46,
Organism=Escherichia coli, GI1789306, Length=304, Percent_Identity=61.8421052631579, Blast_Score=387, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005925
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.11 [H]

Molecular weight: Translated: 33524; Mature: 33524

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00147 ARGINASE_1 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIFNQVDNSLYSNAMTFLRLPMPTDPVSTDADIAVLGLPFDLATTGRSGARMGPTAIR
CCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCEEHCCCCCCCCCCCHHHHH
QASINLAWEGKRFPWKFNLLKKTKIIDAGDLVYSTGDANAFTQKVTAAATQLLASGKAIL
HEEEEEEECCCCCCEEEEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEE
SLGGDHFVTLPLLRAHHQKFGKMALIHFDAHTDTYHDGSAYDHGTMFYHAPKEGLIDPEK
EECCCCEEEHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
SVQIGIRTAYNETGHGFNVINAPQANDMRAEQIASFIKEKVQTMPVYLTFDIDCLDPAFA
CEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCEEEEEEEEEECCCCCC
PGTGTPVCGGLSTDKILKILRALTDINIVGMDVVEVAPAYDNSEITALAAATIGVELLHL
CCCCCCCCCCCCHHHHHHHHHHHHCCCEECCHHHEECCCCCCCCEEEEHHHHHCEEEEEE
WTIKNKDIC
EEECCCCCC
>Mature Secondary Structure
MNSIFNQVDNSLYSNAMTFLRLPMPTDPVSTDADIAVLGLPFDLATTGRSGARMGPTAIR
CCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCEEHCCCCCCCCCCCHHHHH
QASINLAWEGKRFPWKFNLLKKTKIIDAGDLVYSTGDANAFTQKVTAAATQLLASGKAIL
HEEEEEEECCCCCCEEEEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEE
SLGGDHFVTLPLLRAHHQKFGKMALIHFDAHTDTYHDGSAYDHGTMFYHAPKEGLIDPEK
EECCCCEEEHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
SVQIGIRTAYNETGHGFNVINAPQANDMRAEQIASFIKEKVQTMPVYLTFDIDCLDPAFA
CEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCEEEEEEEEEECCCCCC
PGTGTPVCGGLSTDKILKILRALTDINIVGMDVVEVAPAYDNSEITALAAATIGVELLHL
CCCCCCCCCCCCHHHHHHHHHHHHCCCEECCHHHEECCCCCCCCEEEEHHHHHCEEEEEE
WTIKNKDIC
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA