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The map label for this gene is speA [H]

Identifier: 119944622

GI number: 119944622

Start: 1077158

End: 1079071

Strand: Reverse

Name: speA [H]

Synonym: Ping_0861

Alternate gene names: 119944622

Gene position: 1079071-1077158 (Counterclockwise)

Preceding gene: 119944623

Following gene: 119944621

Centisome position: 23.67

GC content: 39.39

Gene sequence:

>1914_bases
ATGAAAAAAACAACTTCACTTGATGATCTTCGTGATTGCTACAACGTGCGTCACTGGGGACAAGGCTACTTTGGTATTAA
TGAGCAGGGTGATGTTTACGTCGCGCCTAAAAGTGGTCATCAAGATCAGACTATTGTGATCAGTGACATTGCTGAAAAAA
TACAGGAAAAAGGACTGTCTCTTCCAGCTCTAGTGCGTTTCCCACAGATTATTCACCAAAGAGTGAATGGTTTATGTGAA
GTATTTAACAATGCCATTGAACAATATCAATATAATGAAAAATATTTATTGGTTTACCCTATTAAAGTCAATCAACAGCG
TGAAGTTGTTAATGAAATTCTGGCCAGCCAGGACAATAAGGAAGTTAAACAACTGGGCCTTGAAGCCGGCAGTAAAGCTG
AATTGCTGGCGGTACTCGCTTTGGCACAAAAAGCCTCATCAGTTATTGTCTGTAACGGTTATAAAGACAGAGAATATGTC
CGTCTGGCGCTAATCGGTGAAAAACTGGGCCACAAAGTACATCTTGTTTTAGAAAAAATGTCTGAACTGGAAATGATTTT
AAGTGAAGCTAAAAAACTTAATGTTGCGCCTCGTTTAGGCATCCGTGTGCGTTTAGCCTCACAGGGTAAAGGTAAATGGC
AGGCAAGTGGTGGCGAAAAATCGAAATTCGGTTTATCCGCCTCACAAGTCTTGAAAGTGCTGGATGTATTAAAAGAAAAT
AATAAACTGGATACCTTACAGCTTGTTCATTTCCATTTAGGCTCACAAATCGCAAATATCCGTGATGTGCGTTTGGGTGT
GAGTGAAGCTGCAAGATTTTATTGTGAATTACGCGATTTAGGGGCAGAAATCACATGTATGGATGTGGGTGGCGGATTAG
CTGTTGATTACGATGGGACTCGCAGTCAATCTCATAATTCAATGAATTACAGCTTAGCGGAATATGCTAACAATATTGTT
TATACCATTGGCGATATTTGTAAAAGCTACGATCAGCCCGTTCCAATGATTATTTCTGAATCAGGACGTTCGCTGACAGC
CCATCACGCGGTATTAATTTCCAATGTTATTGGTGCAGAGTCTTACGCACCGGAGAAGCTGACGAATCCCAAAAAGAATG
ATTCTCTGTTGCTGAAAAATATGTGGCAATCCTGGGAGCAATTAAATACGCGCAATGATGATCGCGCACTGATCGAAATT
TACCATGACACCCAAAATGACCTTGCTGAAGTGCATAGCCAATTTGGATCAGGGTTAATTAATTTATCACAACGCGCATG
GGCTGAGCAGGTCAATTTACGGGTTTGTTATGAACTTAACCAGTTAATGGATAATAAAAACCGTTTTCATCGCCCTATTA
TTGATGATTTAACCGAAAAATTGGCGGATAAATTTTTTGTTAATTTTTCATTATTCCAATCACTGCCGGATAGCTGGGGA
ATCGATCAAGTTTTCCCTATATTACCCCTAAACAATTTACAATCGACACAAAAAAAACGTGCTGTTTTACTTGATATTAC
CTGTGATTCCGATGGCGCCATTGAGAATTATGTAGATGGTCAAGGCATTGAAAGCACCTTATTAGTACCAGAATGGCAGG
AAGATAAACCCTATTTAATGGGCTTTTTTCTGGTCGGGGCTTATCAGGAAATCCTAGGTGATATGCATAATTTATTTGGT
GATACACACAGTGCTGTCGTGATGGTAAACGAGGCGGGTGAAGCTGAACTCACTGAAATAAATGAAGGTGATAGTGTTGA
AGATATGCTTAGATACGTGAACTTAAATGCCGAGGAATTCAAACAAACCTATGCTGAATTGGTCAATAGAAAATTACCTG
TTGAAGAGCGCGAAAGTATCATTAATGAATTAATCACCGGTTTACAGGGTTATACCTATTTAGAAGATTTTTAA

Upstream 100 bases:

>100_bases
AAAAAATATTTTTTTATTCGTTTGACTTTACAATCCTTGCATCTATTCTCACAGGTTAAAATCACCCTTGTGGTGATTTC
ATTTTACTCTAGGAACTTAA

Downstream 100 bases:

>100_bases
GGTGGAGAAAAAATTATAATGAATTCTATTTTTAACCAAGTGGATAATTCCCTTTACTCAAATGCAATGACCTTTTTACG
TCTGCCCATGCCGACAGATC

Product: arginine decarboxylase

Products: NA

Alternate protein names: ADC [H]

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MKKTTSLDDLRDCYNVRHWGQGYFGINEQGDVYVAPKSGHQDQTIVISDIAEKIQEKGLSLPALVRFPQIIHQRVNGLCE
VFNNAIEQYQYNEKYLLVYPIKVNQQREVVNEILASQDNKEVKQLGLEAGSKAELLAVLALAQKASSVIVCNGYKDREYV
RLALIGEKLGHKVHLVLEKMSELEMILSEAKKLNVAPRLGIRVRLASQGKGKWQASGGEKSKFGLSASQVLKVLDVLKEN
NKLDTLQLVHFHLGSQIANIRDVRLGVSEAARFYCELRDLGAEITCMDVGGGLAVDYDGTRSQSHNSMNYSLAEYANNIV
YTIGDICKSYDQPVPMIISESGRSLTAHHAVLISNVIGAESYAPEKLTNPKKNDSLLLKNMWQSWEQLNTRNDDRALIEI
YHDTQNDLAEVHSQFGSGLINLSQRAWAEQVNLRVCYELNQLMDNKNRFHRPIIDDLTEKLADKFFVNFSLFQSLPDSWG
IDQVFPILPLNNLQSTQKKRAVLLDITCDSDGAIENYVDGQGIESTLLVPEWQEDKPYLMGFFLVGAYQEILGDMHNLFG
DTHSAVVMVNEAGEAELTEINEGDSVEDMLRYVNLNAEEFKQTYAELVNRKLPVEERESIINELITGLQGYTYLEDF

Sequences:

>Translated_637_residues
MKKTTSLDDLRDCYNVRHWGQGYFGINEQGDVYVAPKSGHQDQTIVISDIAEKIQEKGLSLPALVRFPQIIHQRVNGLCE
VFNNAIEQYQYNEKYLLVYPIKVNQQREVVNEILASQDNKEVKQLGLEAGSKAELLAVLALAQKASSVIVCNGYKDREYV
RLALIGEKLGHKVHLVLEKMSELEMILSEAKKLNVAPRLGIRVRLASQGKGKWQASGGEKSKFGLSASQVLKVLDVLKEN
NKLDTLQLVHFHLGSQIANIRDVRLGVSEAARFYCELRDLGAEITCMDVGGGLAVDYDGTRSQSHNSMNYSLAEYANNIV
YTIGDICKSYDQPVPMIISESGRSLTAHHAVLISNVIGAESYAPEKLTNPKKNDSLLLKNMWQSWEQLNTRNDDRALIEI
YHDTQNDLAEVHSQFGSGLINLSQRAWAEQVNLRVCYELNQLMDNKNRFHRPIIDDLTEKLADKFFVNFSLFQSLPDSWG
IDQVFPILPLNNLQSTQKKRAVLLDITCDSDGAIENYVDGQGIESTLLVPEWQEDKPYLMGFFLVGAYQEILGDMHNLFG
DTHSAVVMVNEAGEAELTEINEGDSVEDMLRYVNLNAEEFKQTYAELVNRKLPVEERESIINELITGLQGYTYLEDF
>Mature_637_residues
MKKTTSLDDLRDCYNVRHWGQGYFGINEQGDVYVAPKSGHQDQTIVISDIAEKIQEKGLSLPALVRFPQIIHQRVNGLCE
VFNNAIEQYQYNEKYLLVYPIKVNQQREVVNEILASQDNKEVKQLGLEAGSKAELLAVLALAQKASSVIVCNGYKDREYV
RLALIGEKLGHKVHLVLEKMSELEMILSEAKKLNVAPRLGIRVRLASQGKGKWQASGGEKSKFGLSASQVLKVLDVLKEN
NKLDTLQLVHFHLGSQIANIRDVRLGVSEAARFYCELRDLGAEITCMDVGGGLAVDYDGTRSQSHNSMNYSLAEYANNIV
YTIGDICKSYDQPVPMIISESGRSLTAHHAVLISNVIGAESYAPEKLTNPKKNDSLLLKNMWQSWEQLNTRNDDRALIEI
YHDTQNDLAEVHSQFGSGLINLSQRAWAEQVNLRVCYELNQLMDNKNRFHRPIIDDLTEKLADKFFVNFSLFQSLPDSWG
IDQVFPILPLNNLQSTQKKRAVLLDITCDSDGAIENYVDGQGIESTLLVPEWQEDKPYLMGFFLVGAYQEILGDMHNLFG
DTHSAVVMVNEAGEAELTEINEGDSVEDMLRYVNLNAEEFKQTYAELVNRKLPVEERESIINELITGLQGYTYLEDF

Specific function: Catalyzes the biosynthesis of agmatine from arginine [H]

COG id: COG1166

COG function: function code E; Arginine decarboxylase (spermidine biosynthesis)

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789307, Length=624, Percent_Identity=53.525641025641, Blast_Score=706, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR002985
- InterPro:   IPR022643
- InterPro:   IPR022644
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 71803; Mature: 71803

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTSLDDLRDCYNVRHWGQGYFGINEQGDVYVAPKSGHQDQTIVISDIAEKIQEKGLS
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHCCCC
LPALVRFPQIIHQRVNGLCEVFNNAIEQYQYNEKYLLVYPIKVNQQREVVNEILASQDNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCH
EVKQLGLEAGSKAELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVHLVLEKM
HHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHEEHEEEHHHHCCHHHHHHHHH
SELEMILSEAKKLNVAPRLGIRVRLASQGKGKWQASGGEKSKFGLSASQVLKVLDVLKEN
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCC
NKLDTLQLVHFHLGSQIANIRDVRLGVSEAARFYCELRDLGAEITCMDVGGGLAVDYDGT
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCC
RSQSHNSMNYSLAEYANNIVYTIGDICKSYDQPVPMIISESGRSLTAHHAVLISNVIGAE
CCCCCCCCCEEHHHHHCCCEEEHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHCCC
SYAPEKLTNPKKNDSLLLKNMWQSWEQLNTRNDDRALIEIYHDTQNDLAEVHSQFGSGLI
CCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHH
NLSQRAWAEQVNLRVCYELNQLMDNKNRFHRPIIDDLTEKLADKFFVNFSLFQSLPDSWG
HHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IDQVFPILPLNNLQSTQKKRAVLLDITCDSDGAIENYVDGQGIESTLLVPEWQEDKPYLM
CCHHCCCCCCCCCHHHHCCCEEEEEEEECCCCCHHHCCCCCCCCCEEECCCCCCCCCHHH
GFFLVGAYQEILGDMHNLFGDTHSAVVMVNEAGEAELTEINEGDSVEDMLRYVNLNAEEF
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCHHHH
KQTYAELVNRKLPVEERESIINELITGLQGYTYLEDF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MKKTTSLDDLRDCYNVRHWGQGYFGINEQGDVYVAPKSGHQDQTIVISDIAEKIQEKGLS
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHCCCC
LPALVRFPQIIHQRVNGLCEVFNNAIEQYQYNEKYLLVYPIKVNQQREVVNEILASQDNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCH
EVKQLGLEAGSKAELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVHLVLEKM
HHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHEEHEEEHHHHCCHHHHHHHHH
SELEMILSEAKKLNVAPRLGIRVRLASQGKGKWQASGGEKSKFGLSASQVLKVLDVLKEN
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCC
NKLDTLQLVHFHLGSQIANIRDVRLGVSEAARFYCELRDLGAEITCMDVGGGLAVDYDGT
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCC
RSQSHNSMNYSLAEYANNIVYTIGDICKSYDQPVPMIISESGRSLTAHHAVLISNVIGAE
CCCCCCCCCEEHHHHHCCCEEEHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHCCC
SYAPEKLTNPKKNDSLLLKNMWQSWEQLNTRNDDRALIEIYHDTQNDLAEVHSQFGSGLI
CCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHH
NLSQRAWAEQVNLRVCYELNQLMDNKNRFHRPIIDDLTEKLADKFFVNFSLFQSLPDSWG
HHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IDQVFPILPLNNLQSTQKKRAVLLDITCDSDGAIENYVDGQGIESTLLVPEWQEDKPYLM
CCHHCCCCCCCCCHHHHCCCEEEEEEEECCCCCHHHCCCCCCCCCEEECCCCCCCCCHHH
GFFLVGAYQEILGDMHNLFGDTHSAVVMVNEAGEAELTEINEGDSVEDMLRYVNLNAEEF
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCHHHH
KQTYAELVNRKLPVEERESIINELITGLQGYTYLEDF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA