| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ilvC [H]
Identifier: 119944614
GI number: 119944614
Start: 1070256
End: 1071737
Strand: Reverse
Name: ilvC [H]
Synonym: Ping_0853
Alternate gene names: 119944614
Gene position: 1071737-1070256 (Counterclockwise)
Preceding gene: 119944621
Following gene: 119944613
Centisome position: 23.51
GC content: 41.7
Gene sequence:
>1482_bases ATGGCTAACTATTTTAATACCCTTTCTCTACGTGAAAAGCTAAATCAACTAGGTCAATGTCGTTTTATGGATCGCAGTGA ATTTACCGACGGTTGTGACGCTTTAAAAGGTAAAAAAGTAGTCATTATCGGTTGTGGTGCTCAGGGTTTAAACCAAGGTT TAAACATGCGGGATTCGGGTCTTGACGTCTCTTACACGCTGCGTGCACAAGCCATTGCAGAAAAACGTCAATCATGGAAA AATGCAACTGAAAACGGCTTTGTGGTTGGCACATACGAAGAACTTATTCCTGAAGCCGACCTTTTATGTAACTTAACACC GGACAAACAGCACACAGCTGTTGTTGGTGCAGTTATGCCCTTAATGAAAGAAGGTGCAACACTGTCTTACTCTCACGGTT TTAACATCGTTGAAGAAGGTATGCAGGTCCGTGAAGATTTAACCGTTATTATGTGTGCGCCTAAATGTCCTGGTTCTGAA GTGCGCGAAGAATACAAACGTGGTTTTGGTGTGCCAACACTGATCGCTGTTCACCCGGCAAACGATCCGCAAGGTCAGGG TTTGGTATGGGCTAAAGCCTATGCAAGTGCAACGGGTGGCGATCGCGCCGGTGTGCTTATGTCATCATTTGTGGCAGAAG TTAAATCTGACCTGATGGGTGAGCAAACTATCCTTTGTGGTATGTTACAAACTGGTGCCATTATTGGTTATGAAAAAATG GTTGCCGATGGTATTGAACCAGGATATGCATCAAAACTGATTCAATACGGTTGGGAAACGGTAACAGAAGGCATGAAATA CGGCGGCATCACTAATATGATGGACCGTTTATCAAATCCTGCAAAAATCAAAGCATTTGATATGTCTTTAGAGCTAAAAG AGATTTTACGTCCGCTATTTAACAAGCACATGGATGATATTATTGAAGGTGAATTCTCCCGCACTATGATGGAAGATTGG GCCAACGATGATAAAAATCTTTTACAATGGCGCGCTGAAACGGCTGAAACGGGTTTTGAAAAACAACCTGCAGGCGACAT GAAAATTGATGAGCAGGAATTCTACGACAACGGTATTTTTCTTATTGCGATGATTAAAGCGGGTGTTGAACTGGCGTTTG ATGCAATGACAGCTTCCGGCATTATTGCAGACTCAGCTTATTATGAATCACTGCATGAAACTCCGCTTATCGCCAATACT ATTGCACGTAAAAAACTGTACGAAATGAATGTTGTTATCTCAGATACAGCAGAATACGGTTGTTACCTGTTTGATCATGC TGCTAAGCCACTACTTGCTGATTTTGTTAAAGCATTAGATCCTGAAATGCTGGGTAAACCTTTAACAGTGAAAAATAATG CTGTTGATAATGCACGCCTAATCGAAGTTAATGAAGCCATTCGTTCTCACCCTGTCGAAATCGTTGGTAAAAAACTACGC GGTTACATGACCGAGATGAAAACAATAATAACAGCTTCTTAA
Upstream 100 bases:
>100_bases TTGTGCAATATAAGTTATAGGCTATAGTACTTATTCAAAATTAAAAGCAATGATTGTTATCTGCTTTAATCCCTATCAAC TATTTTTGGAGTGTCATTCA
Downstream 100 bases:
>100_bases TTAGCCCCTTTAGTTAAAACTGACCAAGCCAGAATTTGATTCTGGCTTTTTTTTGCTCTTTTTTTAGAACTACGACTTTG CTTACGCCAGTGGGTTTTGC
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MANYFNTLSLREKLNQLGQCRFMDRSEFTDGCDALKGKKVVIIGCGAQGLNQGLNMRDSGLDVSYTLRAQAIAEKRQSWK NATENGFVVGTYEELIPEADLLCNLTPDKQHTAVVGAVMPLMKEGATLSYSHGFNIVEEGMQVREDLTVIMCAPKCPGSE VREEYKRGFGVPTLIAVHPANDPQGQGLVWAKAYASATGGDRAGVLMSSFVAEVKSDLMGEQTILCGMLQTGAIIGYEKM VADGIEPGYASKLIQYGWETVTEGMKYGGITNMMDRLSNPAKIKAFDMSLELKEILRPLFNKHMDDIIEGEFSRTMMEDW ANDDKNLLQWRAETAETGFEKQPAGDMKIDEQEFYDNGIFLIAMIKAGVELAFDAMTASGIIADSAYYESLHETPLIANT IARKKLYEMNVVISDTAEYGCYLFDHAAKPLLADFVKALDPEMLGKPLTVKNNAVDNARLIEVNEAIRSHPVEIVGKKLR GYMTEMKTIITAS
Sequences:
>Translated_493_residues MANYFNTLSLREKLNQLGQCRFMDRSEFTDGCDALKGKKVVIIGCGAQGLNQGLNMRDSGLDVSYTLRAQAIAEKRQSWK NATENGFVVGTYEELIPEADLLCNLTPDKQHTAVVGAVMPLMKEGATLSYSHGFNIVEEGMQVREDLTVIMCAPKCPGSE VREEYKRGFGVPTLIAVHPANDPQGQGLVWAKAYASATGGDRAGVLMSSFVAEVKSDLMGEQTILCGMLQTGAIIGYEKM VADGIEPGYASKLIQYGWETVTEGMKYGGITNMMDRLSNPAKIKAFDMSLELKEILRPLFNKHMDDIIEGEFSRTMMEDW ANDDKNLLQWRAETAETGFEKQPAGDMKIDEQEFYDNGIFLIAMIKAGVELAFDAMTASGIIADSAYYESLHETPLIANT IARKKLYEMNVVISDTAEYGCYLFDHAAKPLLADFVKALDPEMLGKPLTVKNNAVDNARLIEVNEAIRSHPVEIVGKKLR GYMTEMKTIITAS >Mature_492_residues ANYFNTLSLREKLNQLGQCRFMDRSEFTDGCDALKGKKVVIIGCGAQGLNQGLNMRDSGLDVSYTLRAQAIAEKRQSWKN ATENGFVVGTYEELIPEADLLCNLTPDKQHTAVVGAVMPLMKEGATLSYSHGFNIVEEGMQVREDLTVIMCAPKCPGSEV REEYKRGFGVPTLIAVHPANDPQGQGLVWAKAYASATGGDRAGVLMSSFVAEVKSDLMGEQTILCGMLQTGAIIGYEKMV ADGIEPGYASKLIQYGWETVTEGMKYGGITNMMDRLSNPAKIKAFDMSLELKEILRPLFNKHMDDIIEGEFSRTMMEDWA NDDKNLLQWRAETAETGFEKQPAGDMKIDEQEFYDNGIFLIAMIKAGVELAFDAMTASGIIADSAYYESLHETPLIANTI ARKKLYEMNVVISDTAEYGCYLFDHAAKPLLADFVKALDPEMLGKPLTVKNNAVDNARLIEVNEAIRSHPVEIVGKKLRG YMTEMKTIITAS
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=492, Percent_Identity=70.9349593495935, Blast_Score=723, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323387, Length=294, Percent_Identity=31.9727891156463, Blast_Score=106, Evalue=7e-24,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - InterPro: IPR014359 - InterPro: IPR016040 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 54401; Mature: 54270
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYFNTLSLREKLNQLGQCRFMDRSEFTDGCDALKGKKVVIIGCGAQGLNQGLNMRDSG CCCCHHHHHHHHHHHHHHCEEECCCCCCCCCHHHCCCCEEEEEECCCHHHHCCCCCCCCC LDVSYTLRAQAIAEKRQSWKNATENGFVVGTYEELIPEADLLCNLTPDKQHTAVVGAVMP CCEEEEHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCHHEEECCCCCHHHHHHHHHHH LMKEGATLSYSHGFNIVEEGMQVREDLTVIMCAPKCPGSEVREEYKRGFGVPTLIAVHPA HHHCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECC NDPQGQGLVWAKAYASATGGDRAGVLMSSFVAEVKSDLMGEQTILCGMLQTGAIIGYEKM CCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH VADGIEPGYASKLIQYGWETVTEGMKYGGITNMMDRLSNPAKIKAFDMSLELKEILRPLF HHCCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH NKHMDDIIEGEFSRTMMEDWANDDKNLLQWRAETAETGFEKQPAGDMKIDEQEFYDNGIF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEE LIAMIKAGVELAFDAMTASGIIADSAYYESLHETPLIANTIARKKLYEMNVVISDTAEYG EEEEHHHCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCHHC CYLFDHAAKPLLADFVKALDPEMLGKPLTVKNNAVDNARLIEVNEAIRSHPVEIVGKKLR EEHHHHHCCHHHHHHHHHHCHHHCCCCCEEECCCCCCCEEEEHHHHHHHCCHHHHHHHHH GYMTEMKTIITAS HHHHHHHHHHCCC >Mature Secondary Structure ANYFNTLSLREKLNQLGQCRFMDRSEFTDGCDALKGKKVVIIGCGAQGLNQGLNMRDSG CCCHHHHHHHHHHHHHHCEEECCCCCCCCCHHHCCCCEEEEEECCCHHHHCCCCCCCCC LDVSYTLRAQAIAEKRQSWKNATENGFVVGTYEELIPEADLLCNLTPDKQHTAVVGAVMP CCEEEEHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCHHEEECCCCCHHHHHHHHHHH LMKEGATLSYSHGFNIVEEGMQVREDLTVIMCAPKCPGSEVREEYKRGFGVPTLIAVHPA HHHCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECC NDPQGQGLVWAKAYASATGGDRAGVLMSSFVAEVKSDLMGEQTILCGMLQTGAIIGYEKM CCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH VADGIEPGYASKLIQYGWETVTEGMKYGGITNMMDRLSNPAKIKAFDMSLELKEILRPLF HHCCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH NKHMDDIIEGEFSRTMMEDWANDDKNLLQWRAETAETGFEKQPAGDMKIDEQEFYDNGIF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEE LIAMIKAGVELAFDAMTASGIIADSAYYESLHETPLIANTIARKKLYEMNVVISDTAEYG EEEEHHHCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCHHC CYLFDHAAKPLLADFVKALDPEMLGKPLTVKNNAVDNARLIEVNEAIRSHPVEIVGKKLR EEHHHHHCCHHHHHHHHHHCHHHCCCCCEEECCCCCCCEEEEHHHHHHHCCHHHHHHHHH GYMTEMKTIITAS HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA