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The map label for this gene is ubiX [C]

Identifier: 119944589

GI number: 119944589

Start: 1032260

End: 1032880

Strand: Direct

Name: ubiX [C]

Synonym: Ping_0827

Alternate gene names: 119944589

Gene position: 1032260-1032880 (Clockwise)

Preceding gene: 119944588

Following gene: 119944590

Centisome position: 22.64

GC content: 38.65

Gene sequence:

>621_bases
ATGTCTAAAGATGTTTTTTTTAAAGATAGGATTACGTTAGCGGTAACAGGTGCATCGGGTAGCGGTTACTTCTTAAGGCT
ATTACAGGCATTGGTTAATACAGATATACAAATATATCTATTACTTTCTGATGCGGCTAAAATTGTATTAAAAACAGAAG
AAAATGAAGATTGGCCTGCAGATGTGACTCAACTAAATGTTTTTTTACAGGATAAATATCAGAGTAAACAGCAGCAGATA
GTTGTATTAGCTGCAAAAGATTGGTTTTCACCCGTCGCCTCGGGCTCATCAGCGCCAAATAAAATGATTGTTTGTCCATG
CAGTTGTGGAACATTAGCCTCTATTGCCCACGGTTTATCTAACAATTTAATCGAACGTTCTGCGGATGTTATTTTAAAAG
AACGCGGGAAATTGATTGTCATGCCAAGAGAAACCCCTTTTTCCACTCTTCATTTACGAAACATGCTTACTCTGTCCGAA
TTAGGGGTGACAGTGATGCCATTAGCCCCAGGTTTTTATCATCAGCCTAAAACTATTGCTGATTTACAGGATTTTATGGT
CGCGAGAGTATTAGACCATCTGGAAATAGCACACAAGATCGGTAAACGCTGGTGTGAATGA

Upstream 100 bases:

>100_bases
GCAGAGCGAAACGCTCATATACTCATTATGAGTAATGGTGGTTTTGGTAATATCCATAACAAGTTACTGGGGCAACTCGC
CCTGAAAAAGAAGGTTTAAT

Downstream 100 bases:

>100_bases
TAACAAAAATCAAAAACTAATGATTTTTGTTTGTTTTATAAGCGTAAATATAAAGGTTTTAATTAGTTGGCGTTTTTTCT
TATAAAGGCCTTGCCAAGGT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSKDVFFKDRITLAVTGASGSGYFLRLLQALVNTDIQIYLLLSDAAKIVLKTEENEDWPADVTQLNVFLQDKYQSKQQQI
VVLAAKDWFSPVASGSSAPNKMIVCPCSCGTLASIAHGLSNNLIERSADVILKERGKLIVMPRETPFSTLHLRNMLTLSE
LGVTVMPLAPGFYHQPKTIADLQDFMVARVLDHLEIAHKIGKRWCE

Sequences:

>Translated_206_residues
MSKDVFFKDRITLAVTGASGSGYFLRLLQALVNTDIQIYLLLSDAAKIVLKTEENEDWPADVTQLNVFLQDKYQSKQQQI
VVLAAKDWFSPVASGSSAPNKMIVCPCSCGTLASIAHGLSNNLIERSADVILKERGKLIVMPRETPFSTLHLRNMLTLSE
LGVTVMPLAPGFYHQPKTIADLQDFMVARVLDHLEIAHKIGKRWCE
>Mature_205_residues
SKDVFFKDRITLAVTGASGSGYFLRLLQALVNTDIQIYLLLSDAAKIVLKTEENEDWPADVTQLNVFLQDKYQSKQQQIV
VLAAKDWFSPVASGSSAPNKMIVCPCSCGTLASIAHGLSNNLIERSADVILKERGKLIVMPRETPFSTLHLRNMLTLSEL
GVTVMPLAPGFYHQPKTIADLQDFMVARVLDHLEIAHKIGKRWCE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=198, Percent_Identity=36.3636363636364, Blast_Score=121, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6320746, Length=196, Percent_Identity=38.265306122449, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22902; Mature: 22771

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDVFFKDRITLAVTGASGSGYFLRLLQALVNTDIQIYLLLSDAAKIVLKTEENEDWPA
CCCCEEEECCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEEECCCCCCCC
DVTQLNVFLQDKYQSKQQQIVVLAAKDWFSPVASGSSAPNKMIVCPCSCGTLASIAHGLS
CHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHH
NNLIERSADVILKERGKLIVMPRETPFSTLHLRNMLTLSELGVTVMPLAPGFYHQPKTIA
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHH
DLQDFMVARVLDHLEIAHKIGKRWCE
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKDVFFKDRITLAVTGASGSGYFLRLLQALVNTDIQIYLLLSDAAKIVLKTEENEDWPA
CCCEEEECCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEEECCCCCCCC
DVTQLNVFLQDKYQSKQQQIVVLAAKDWFSPVASGSSAPNKMIVCPCSCGTLASIAHGLS
CHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHH
NNLIERSADVILKERGKLIVMPRETPFSTLHLRNMLTLSELGVTVMPLAPGFYHQPKTIA
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHH
DLQDFMVARVLDHLEIAHKIGKRWCE
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]