Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944590
Identifier: 119944590
GI number: 119944590
Start: 1040057
End: 1040740
Strand: Direct
Name: 119944590
Synonym: Ping_0828
Alternate gene names: NA
Gene position: 1040057-1040740 (Clockwise)
Preceding gene: 119944589
Following gene: 119944596
Centisome position: 22.81
GC content: 35.67
Gene sequence:
>684_bases TTGCAAAAAAAAGCACAAAGAGTCATTCAGGTTAAACCAAATTCAAAACATAATCGTTTATTTTTATTATGTTTAGGCTC TTTATTGTTGTGCGTTTGTTTGTTGTTAAATCTTGTATTTTGGGACGACTATAGGCTCCCGTTAATCTTTATTATGTCAG CCAGTTTTATCATGTTATTTGTTGCTTTGCTTAAATTTTTAGAGCCACCAATAAGTTACTTCATAACACCGGAGATTATC TCTTATTATCATTTTAACGGTCATTGGCATTTACCCTGGCAAGATATTCTGCGCATTGGTGATATCCCAGCTGATATACG GGGGCAGCATGTGAAATTACCTTATTTGGGCATAAAATTAAATAGCTTGGCAAATATAGCGCAAACTATCTCACCAAGGT TGGCTAATAAATTACTTCATGAGCAGTTGGAGCTATTAATGTTAGCGGTAAAAAACCGTGAAATTGATCTGCCAGAGGAT CTGATTAACTTTGAACCCTTTGAATTAAATGGGGTTACCTACAAAGGCCCGATCGCCGCATGGTTATATCGGACAGAAGA GCTGAGTAAAGCTTATGGTTATCATCTCTATTTACCGATAAATAGTTTTGATCGTGAGTCAATGGAGTTTTTAGGTTTAT TGAAAGAATGCCACCATTATATTAATAGCTACCAAGGCAACTAA
Upstream 100 bases:
>100_bases ATGCATTGCTAGTGTTGATTTTTCTGGCGTACTACAAGATTACATTTTGAATGCATTTGCTATTATCATTGTATTAAAAA ATTTTTAAGGAGTACGAGAC
Downstream 100 bases:
>100_bases TTATTGCTGATCATATTAATGCATTGTAAAAAAAGTTTTATCTTATTCAAGCTCAAAAAAAAGCTTAATTATATAATAAT TAAGCCTTTTAATAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MQKKAQRVIQVKPNSKHNRLFLLCLGSLLLCVCLLLNLVFWDDYRLPLIFIMSASFIMLFVALLKFLEPPISYFITPEII SYYHFNGHWHLPWQDILRIGDIPADIRGQHVKLPYLGIKLNSLANIAQTISPRLANKLLHEQLELLMLAVKNREIDLPED LINFEPFELNGVTYKGPIAAWLYRTEELSKAYGYHLYLPINSFDRESMEFLGLLKECHHYINSYQGN
Sequences:
>Translated_227_residues MQKKAQRVIQVKPNSKHNRLFLLCLGSLLLCVCLLLNLVFWDDYRLPLIFIMSASFIMLFVALLKFLEPPISYFITPEII SYYHFNGHWHLPWQDILRIGDIPADIRGQHVKLPYLGIKLNSLANIAQTISPRLANKLLHEQLELLMLAVKNREIDLPED LINFEPFELNGVTYKGPIAAWLYRTEELSKAYGYHLYLPINSFDRESMEFLGLLKECHHYINSYQGN >Mature_227_residues MQKKAQRVIQVKPNSKHNRLFLLCLGSLLLCVCLLLNLVFWDDYRLPLIFIMSASFIMLFVALLKFLEPPISYFITPEII SYYHFNGHWHLPWQDILRIGDIPADIRGQHVKLPYLGIKLNSLANIAQTISPRLANKLLHEQLELLMLAVKNREIDLPED LINFEPFELNGVTYKGPIAAWLYRTEELSKAYGYHLYLPINSFDRESMEFLGLLKECHHYINSYQGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26489; Mature: 26489
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKAQRVIQVKPNSKHNRLFLLCLGSLLLCVCLLLNLVFWDDYRLPLIFIMSASFIMLF CCCHHCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VALLKFLEPPISYFITPEIISYYHFNGHWHLPWQDILRIGDIPADIRGQHVKLPYLGIKL HHHHHHHCCCHHEEECHHHHHEEEECCEEECCHHHHHHHCCCCCCCCCCEEECCEECEEH NSLANIAQTISPRLANKLLHEQLELLMLAVKNREIDLPEDLINFEPFELNGVTYKGPIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEECCEEECCCHHH WLYRTEELSKAYGYHLYLPINSFDRESMEFLGLLKECHHYINSYQGN HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQKKAQRVIQVKPNSKHNRLFLLCLGSLLLCVCLLLNLVFWDDYRLPLIFIMSASFIMLF CCCHHCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VALLKFLEPPISYFITPEIISYYHFNGHWHLPWQDILRIGDIPADIRGQHVKLPYLGIKL HHHHHHHCCCHHEEECHHHHHEEEECCEEECCHHHHHHHCCCCCCCCCCEEECCEECEEH NSLANIAQTISPRLANKLLHEQLELLMLAVKNREIDLPEDLINFEPFELNGVTYKGPIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEECCEEECCCHHH WLYRTEELSKAYGYHLYLPINSFDRESMEFLGLLKECHHYINSYQGN HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA